rpp40 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	rpp40
Entrez Gene ID	415238
Full Name	ribonuclease P/MRP 40 subunit
Synonyms	rpp40l,zgc:86704
General protein information	Preferred Names ribonuclease P/MRP 40 subunit Names ribonuclease P protein subunit p40 ribonuclease P 40 subunit like
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001002148.1	NP_001002148.1	ribonuclease P protein subunit p40

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	RPP40	XP_535875.2
Rattus norvegicus (Norway rat)	Rpp40	NP_001013073.1
	RPP40	XP_001095772.1
Pan troglodytes (chimpanzee)	RPP40	XP_527222.2
Mus musculus (house mouse)	Rpp40	NP_666050.3
Xenopus tropicalis (tropical clawed frog)	rpp40	NP_001072417.1
Homo sapiens (human)	RPP40	NP_006629.2
Gallus gallus (chicken)	RPP40	XP_418963.1
Danio rerio (zebrafish)	rpp40	NP_001002148.1
Bos taurus (cattle)	RPP40	NP_001098872.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Inventory and analysis of the protein subunits of the ribonucleases P and MRP provides further evidence of homology between the yeast and human enzymes.
Rosenblad MA, L?pez MD, Piccinelli P, Samuelsson T
Nucleic acids research34(18)5145-56(2006)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following rpp40 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the rpp40 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa03007	NM_001002148.1 Latest version!	Danio rerio ribonuclease P/MRP 40 subunit (rpp40), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

rpp40 ( NM_001002148.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001002148.1 Danio rerio ribonuclease P/MRP 40 subunit (rpp40), mRNA.

Price & Availability↑

CloneID	ODa03007
Clone ID Related Accession (Same CDS sequence)	NM_001002148.1
Accession Version	NM_001002148.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1086bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	ribonuclease P protein subunit p40
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC071381.1. ##Evidence-Data-START## Transcript exon combination :: BC071381.1, EE317983.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGTCGCCAG AGCTGGAAAA GTGCCCGAGA AACCTGCTGG TGTGCGAGAA ATCAAACTTC 
TTGAATGAAA AGTCTCGGCA TGACATCCAC GTGTCGAAGC ACAGCTTTAA CTACAAGACC 
TCAGTGTTGA TTCCTGAATG CGGGATCCTG CCTGCTAACA TCAGCAGTGC CTTCAGCAGC 
TTCAGCCCTT ATTATTTAGT GCGGGACCTG CCTGTATATG AACTGCTGGA AGAAACATTT 
CTGGAGTCGC TCGTGAAGAA AGGACATTTC TATGCACTCT CTTACAACAC CAAAATTGAT 
GAAGATAATT CCATTGCACT TCTTTCCAGT GGTCAGTTCA TTTTGTCTTT AAATAAAGAC 
ACATACGAGC AACTTGGCTT GGAGGGCCGA CCATCCCAGT ACAATCACAG AAAGGCTCTG 
AGATTTGTTG TGACTCTTGA CCTCACGGAT AAAAGCTTGG CTCCAGGCAC CAAACGATAC 
CAGCGGGTTC TGTCATCTTT AAAAGACAGA CTTCCACTCA AATATGACTT TCTTTTCACC 
AAGTACAACA CAGGTTCTGA TGAAGACGAA GTTCTTCATG CGCTGCTGTC CCGTTACACA 
TACAAGGAGC ACAAGCCTGT TTTCAGCCAG CACATCCTGA AAAATATTCA GTGTCCCACA 
CTTTACCCAT CGGATATACA AGGAAAGACG CTGTCATGTG ACCCACATCG TTTCTTGGAG 
TGGCTTGGAG CAGTTAATCT GGATATTAAT TGTGAAAATG CAGCTGACAG TTTCCTGTCA 
ACATATGTGT GTCCCGAGCC TCAGAGCTCC ATCAGTCAGG CTGTGGTGTG CAGCGTCACT 
GGCTTCATCT CACCTGAGAA TGTGTTTGTG CTGCTGCAGG AGCTCAGGAA GTATTTCGAT 
GAACCGAAGT TCACACCATG GCTTTCCCTC ACAGTGCATG GGTTTATGGA CAGTCCTGTG 
TCGTGGGGAA CCTCAGAGCA CGGCTTCCTC AAAGGTGGTG AAAACTTCTA CAATTTTGTT 
TGTTTCAAGA ATCAGGACTA CTGGCTACAC ATGGCCACCG GTGCTCAAGA TGCCTGTCCA 
CCTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001002148.1
CDS	70..1155
Translation	MSPELEKCPRNLLVCEKSNFLNEKSRHDIHVSKHSFNYKTSVLIPECGILPANISSAFSSFSPYYLVRDLPVYELLEETFLESLVKKGHFYALSYNTKIDEDNSIALLSSGQFILSLNKDTYEQLGLEGRPSQYNHRKALRFVVTLDLTDKSLAPGTKRYQRVLSSLKDRLPLKYDFLFTKYNTGSDEDEVLHALLSRYTYKEHKPVFSQHILKNIQCPTLYPSDIQGKTLSCDPHRFLEWLGAVNLDINCENAADSFLSTYVCPEPQSSISQAVVCSVTGFISPENVFVLLQELRKYFDEPKFTPWLSLTVHGFMDSPVSWGTSEHGFLKGGENFYNFVCFKNQDYWLHMATGAQDACPP

Target ORF information:

RefSeq Version	NM_001002148.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio ribonuclease P/MRP 40 subunit (rpp40), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001002148.1

ORF Insert Sequence:

ATGTCGCCAG AGCTGGAAAA GTGCCCGAGA AACCTGCTGG TGTGCGAGAA ATCAAACTTC 
TTGAATGAAA AGTCTCGGCA TGACATCCAC GTGTCGAAGC ACAGCTTTAA CTACAAGACC 
TCAGTGTTGA TTCCTGAATG CGGGATCCTG CCTGCTAACA TCAGCAGTGC CTTCAGCAGC 
TTCAGCCCTT ATTATTTAGT GCGGGACCTG CCTGTATATG AACTGCTGGA AGAAACATTT 
CTGGAGTCGC TCGTGAAGAA AGGACATTTC TATGCACTCT CTTACAACAC CAAAATTGAT 
GAAGATAATT CCATTGCACT TCTTTCCAGT GGTCAGTTCA TTTTGTCTTT AAATAAAGAC 
ACATACGAGC AACTTGGCTT GGAGGGCCGA CCATCCCAGT ACAATCACAG AAAGGCTCTG 
AGATTTGTTG TGACTCTTGA CCTCACGGAT AAAAGCTTGG CTCCAGGCAC CAAACGATAC 
CAGCGGGTTC TGTCATCTTT AAAAGACAGA CTTCCACTCA AATATGACTT TCTTTTCACC 
AAGTACAACA CAGGTTCTGA TGAAGACGAA GTTCTTCATG CGCTGCTGTC CCGTTACACA 
TACAAGGAGC ACAAGCCTGT TTTCAGCCAG CACATCCTGA AAAATATTCA GTGTCCCACA 
CTTTACCCAT CGGATATACA AGGAAAGACG CTGTCATGTG ACCCACATCG TTTCTTGGAG 
TGGCTTGGAG CAGTTAATCT GGATATTAAT TGTGAAAATG CAGCTGACAG TTTCCTGTCA 
ACATATGTGT GTCCCGAGCC TCAGAGCTCC ATCAGTCAGG CTGTGGTGTG CAGCGTCACT 
GGCTTCATCT CACCTGAGAA TGTGTTTGTG CTGCTGCAGG AGCTCAGGAA GTATTTCGAT 
GAACCGAAGT TCACACCATG GCTTTCCCTC ACAGTGCATG GGTTTATGGA CAGTCCTGTG 
TCGTGGGGAA CCTCAGAGCA CGGCTTCCTC AAAGGTGGTG AAAACTTCTA CAATTTTGTT 
TGTTTCAAGA ATCAGGACTA CTGGCTACAC ATGGCCACCG GTGCTCAAGA TGCCTGTCCA 
CCTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Inventory and analysis of the protein subunits of the ribonucleases P and MRP provides further evidence of homology between the yeast and human enzymes.
Nucleic acids research34(18)5145-56(2006)
Rosenblad MA,L?pez MD,Piccinelli P,Samuelsson T