caprin2 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	caprin2
Entrez Gene ID	407729
Full Name	caprin family member 2
Synonyms	c1qdc1,rng140,wu:fj80b02
General protein information	Preferred Names caprin family member 2 Names caprin-2 C1q domain containing 1 RNA granule protein 140
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001013273.1	NP_001013291.1	caprin-2

Pathways from BioSystems

Homologies

Gallus gallus (chicken)	CAPRIN2	XP_004937959.1
Canis lupus familiaris (dog)	CAPRIN2	XP_005637485.1
Bos taurus (cattle)	CAPRIN2	XP_002687766.3
Danio rerio (zebrafish)	caprin2	NP_001013291.1
Xenopus tropicalis (tropical clawed frog)	caprin2	XP_002942296.2
Pan troglodytes (chimpanzee)	CAPRIN2	XP_520819.3
	CAPRIN2	XP_001082308.1
Homo sapiens (human)	CAPRIN2	NP_001002259.1
Mus musculus (house mouse)	Caprin2	NP_853519.2
Rattus norvegicus (Norway rat)	Caprin2	XP_006237773.1

Gene Ontology
Bibliography

Related articles in PubMed

Identification of target genes downstream of semaphorin6A/PlexinA2 signaling in zebrafish.
Emerson SE, St Clair RM, Waldron AL, Bruno SR, Duong A, Driscoll HE, Ballif BA, McFarlane S, Ebert AM
Developmental dynamics : an official publication of the American Association of Anatomists246(7)539-549(2017 Jul)

Amyloid-like Self-Assembly of a Cellular Compartment.
Boke E, Ruer M, W?hr M, Coughlin M, Lemaitre R, Gygi SP, Alberti S, Drechsel D, Hyman AA, Mitchison TJ
Cell166(3)637-650(2016 Jul)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

Structural insights into the C1q domain of Caprin-2 in canonical Wnt signaling.
Miao H, Jia Y, Xie S, Wang X, Zhao J, Chu Y, Zhou Z, Shi Z, Song X, Li L
The Journal of biological chemistry289(49)34104-13(2014 Dec)

Zebrafish kr?ppel-like factor 4a represses intestinal cell proliferation and promotes differentiation of intestinal cell lineages.
Li IC, Chan CT, Lu YF, Wu YT, Chen YC, Li GB, Lin CY, Hwang SP
PloS one6(6)e20974(2011)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Caprin-2 C1q-related domain forms a flexible homotrimer mediated by calcium, and this trimeric assembly is required for the functioning of caprin-2.
Title: Structural insights into the C1q domain of Caprin-2 in canonical Wnt signaling.

The following caprin2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the caprin2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa00207	NM_001013273.1 Latest version!	Danio rerio caprin family member 2 (caprin2), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

caprin2 ( NM_001013273.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001013291.1 Danio rerio caprin family member 2 (caprin2), mRNA.

Price & Availability↑

CloneID	ODa00207
Clone ID Related Accession (Same CDS sequence)	NM_001013273.1
Accession Version	NM_001013273.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2745bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-02-26
Organism	Danio rerio(zebrafish)
Product	caprin-2
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX001012.6. ##Evidence-Data-START## Transcript exon combination :: BC171714.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGAGAAAGA CTGAAACCAT GGTTCAGCTA TCACCATCTC GGACATTAGA GACGTTGACG 
CCCTCGGAAC TCACTGTGGA GAAGGATGAT GGCCAGGGCA GCCCAAAACC TGAATCCCCT 
CGAATGCTTT CCGCCCTCCA GCTAGCCCTG AGCTCTACAA CCGTCTACTG TGGCTATGAG 
AAGTACATTG AGGACGGCCT CATTTGCCTC AAGCACAAGA TTCGTAACAT TGAGAAAAAG 
AAGCTCAAAC TGGAAAGATA CAGTGATAAG CTGAAGAAGG GGGAAAAGCT GAATGAAGAC 
CAACTGGAAG CTGTGGGCAA GTACGATGAG GTGGTCCATA ATCTGAAGTT TGCCAAAGAG 
CTCCAGAAGA CCATCGGCTC CCTCACTCAA GATTTGCTGA AGGCTCAGCG TAAAGCCGTT 
CGCCAAGAGA AGCAAATGAA GACTGATGAG GAGAAGAGCC GTTTGAGTCT AATGCTCCAG 
GTGCAGTACG TCCTCCATAG TCTGCAGAGA GAGGACGTCC GGAAGAACTT CTGCAACACC 
AGACAATATT CCTGCTACAT GTCCACTCAA GACATGGAGG GTTTGATGGA TTTGGCATCA 
CTGGTGGGAT GTAAAAGGGA TTACAGCATT AGTTTGGAGG ATCAGATGCG ACGGGCTGCT 
ATTGTTTACT GGGAGCTGCT GGAAGGGAAT GAAAAACCGG TTGCTGGCTC GACATACAAG 
CACATGAAGG AGAAGCTTCT TCGCCTAGTG GATTCTGGCT TTTTCGATAA CATCCCGCTT 
CCTAAATCTG ACAGTCAAGA GAAGACCGAA ACCATAAAGC CTGATTCTCA ATCCAGACCC 
AGTGGCCTCA CCACGCTGGT AAAGCTGAGC TCAAATGAAG TGCCTTCCAA AGAGTTTCTT 
AACAGACGAT ACATGCCTGA AACTGATGAG CGCAGACGAG GTGAAACCGC ATCGCCTCGC 
AACTGGAAGG AAGACTTTTT GGCCATGAAG GAGAGGGAGC CACCGGACTC CTGGGAAATG 
GAGGAGCTTG CTGATCCTCC TGCGTCCTCC CAGTCCCCCA TACAGAAGCC ATGGAAAGGA 
GCAGCGGGTT TGATTCCTAA AACTGTAGAC ATTGTGAAGA GATCCACGAC TGACCCTAAA 
GAGAAACGTC AAAGAAAGAA GGCTGAGCAA GACTCCAAAT CTATGCCCGT TGCAGTGGAA 
GTCTTCAGTT CTCCATCTCC GTTACCAAAA GATCCCGTTC AGCGCCGGCA GCAGCTGGAG 
ACACTGATGG ACCAGATCTC TGGCTCCTTC AGTTTCATGC AGGAGTCTCT TTTGGATGGA 
GAATCTTCAC CTGTCAACAC TCAAACAAAA AGATGCCGTC CATCTCCAGG CTCCTCCACT 
CCAATCGTAC AGAGAGAATT GACCAAAAGC CCTTCAGATA TTCTGCCTTC ATCGCAGCGG 
AGCACTCCTT TGCGGATTCT GCTGTCTGGA GAGGGTAAAG GCTGTCTGTC CAATGGAGAT 
CGCTCCATAA ATGGCTCTGA TCTGGAGCTG CACTCTGAAG ATAAGCCACG GAAGCAGGCT 
GAGGGCTTCA ACTCACCTCC ACTGTACCGC AGAGGATCCT CCATTTCAGT TTCTCTAGAA 
AACCAAAGCA CTGTACAGGC AGGAAGGCAG ATGTTATGCA ATGGAGTATC GAGCTCTGGT 
TCTGCACAGA CATTTTCAAC CCCACCCAGT CGCAGATCCA TCAGCGCAGA AAACCCCTTC 
CACAACATTC ACTCTGTGTT TAATGTGATC GGCGAGAGCT CAGGGATGAA GGCAGATGAG 
AGCGGTTTCT CGGAGTCCAT ACATCGCAGT TTCACGTCAG CCAAAACCTC CAGTGTAACC 
ACTGCCAGCA CTCAGACTCC ACCTGAACTT AACCCACCCG AGGAAGACCT GCAGATCGAA 
GGCCAGTATC CTCTGGAGTG TGCAGTCAGT GCTGGTGGTC CCGTGTTCTC CAGCTCCCAT 
TCTCGTGTGG GTCAGTCGTG TTACTCTCGC GGGGCAGTCA GAGGTGGTTA TGATGCCTAC 
AGAGTGAATG TACGTTCCCC AGGAGGAAGC TTCATGTCCC AGACACACAG AGAGCCTGCG 
TCTGCACTTT ACATGGCCAG AGAAAACGGC TATCAGCAAA ACTTCAAGAG AGGAGCAGGC 
ACAGCAACTC AGAGGAGCAG CGCCGGCTGG AGCGACTCTT CTCAAGTGAG CAGTCCGGAT 
CGAGATGGGG CGTATCCTCT GGATTCAGGA CTTAGTGACA CCCTGTCTAT CCCGGCCATG 
GAGGTGCCCA TGAATCCACA AGGCCCGCAC ACCCTGATGC CTGTCCATGT GTACCCACTC 
ACCCAGCTCC GTGTGGCATT CTCTGCTGCT CGCACCGCCA ACTTTGCGCC GGGCACTTTA 
GACCAGCCCA TCGCCTTTGA TCTGCTCCAC ACCAACCTGG GTGACATGTT CGACACTGGC 
TCTGGTCGCT TCACCTGCCC AGCCACCGGT GCCTACGTCT TCATCTTCCA CATCCTGAAG 
CTGGCCATCA GCGTGCCGCT CTACATCAAC CTCATGCGCA ACGAAGAGGT GATGGTGTCC 
GCGTATGCCA ACGACGGTGC CCCAGATCAC GAAACGGCCA GTAATCATGC TGTCCTGCAG 
CTGTTTCAAG GCGATCAGGT GTGGCTCAGG CTGCACCGTG GCGCCATCTA TGGCAGCAGC 
TGGAAGTATA GCACCTTCTC TGGATTCCTG CTGTACCAGG ATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001013291.1
CDS	198..2942
Translation	MRKTETMVQLSPSRTLETLTPSELTVEKDDGQGSPKPESPRMLSALQLALSSTTVYCGYEKYIEDGLICLKHKIRNIEKKKLKLERYSDKLKKGEKLNEDQLEAVGKYDEVVHNLKFAKELQKTIGSLTQDLLKAQRKAVRQEKQMKTDEEKSRLSLMLQVQYVLHSLQREDVRKNFCNTRQYSCYMSTQDMEGLMDLASLVGCKRDYSISLEDQMRRAAIVYWELLEGNEKPVAGSTYKHMKEKLLRLVDSGFFDNIPLPKSDSQEKTETIKPDSQSRPSGLTTLVKLSSNEVPSKEFLNRRYMPETDERRRGETASPRNWKEDFLAMKEREPPDSWEMEELADPPASSQSPIQKPWKGAAGLIPKTVDIVKRSTTDPKEKRQRKKAEQDSKSMPVAVEVFSSPSPLPKDPVQRRQQLETLMDQISGSFSFMQESLLDGESSPVNTQTKRCRPSPGSSTPIVQRELTKSPSDILPSSQRSTPLRILLSGEGKGCLSNGDRSINGSDLELHSEDKPRKQAEGFNSPPLYRRGSSISVSLENQSTVQAGRQMLCNGVSSSGSAQTFSTPPSRRSISAENPFHNIHSVFNVIGESSGMKADESGFSESIHRSFTSAKTSSVTTASTQTPPELNPPEEDLQIEGQYPLECAVSAGGPVFSSSHSRVGQSCYSRGAVRGGYDAYRVNVRSPGGSFMSQTHREPASALYMARENGYQQNFKRGAGTATQRSSAGWSDSSQVSSPDRDGAYPLDSGLSDTLSIPAMEVPMNPQGPHTLMPVHVYPLTQLRVAFSAARTANFAPGTLDQPIAFDLLHTNLGDMFDTGSGRFTCPATGAYVFIFHILKLAISVPLYINLMRNEEVMVSAYANDGAPDHETASNHAVLQLFQGDQVWLRLHRGAIYGSSWKYSTFSGFLLYQD

Target ORF information:

RefSeq Version	NM_001013273.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio caprin family member 2 (caprin2), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001013273.1

ORF Insert Sequence:

ATGAGAAAGA CTGAAACCAT GGTTCAGCTA TCACCATCTC GGACATTAGA GACGTTGACG 
CCCTCGGAAC TCACTGTGGA GAAGGATGAT GGCCAGGGCA GCCCAAAACC TGAATCCCCT 
CGAATGCTTT CCGCCCTCCA GCTAGCCCTG AGCTCTACAA CCGTCTACTG TGGCTATGAG 
AAGTACATTG AGGACGGCCT CATTTGCCTC AAGCACAAGA TTCGTAACAT TGAGAAAAAG 
AAGCTCAAAC TGGAAAGATA CAGTGATAAG CTGAAGAAGG GGGAAAAGCT GAATGAAGAC 
CAACTGGAAG CTGTGGGCAA GTACGATGAG GTGGTCCATA ATCTGAAGTT TGCCAAAGAG 
CTCCAGAAGA CCATCGGCTC CCTCACTCAA GATTTGCTGA AGGCTCAGCG TAAAGCCGTT 
CGCCAAGAGA AGCAAATGAA GACTGATGAG GAGAAGAGCC GTTTGAGTCT AATGCTCCAG 
GTGCAGTACG TCCTCCATAG TCTGCAGAGA GAGGACGTCC GGAAGAACTT CTGCAACACC 
AGACAATATT CCTGCTACAT GTCCACTCAA GACATGGAGG GTTTGATGGA TTTGGCATCA 
CTGGTGGGAT GTAAAAGGGA TTACAGCATT AGTTTGGAGG ATCAGATGCG ACGGGCTGCT 
ATTGTTTACT GGGAGCTGCT GGAAGGGAAT GAAAAACCGG TTGCTGGCTC GACATACAAG 
CACATGAAGG AGAAGCTTCT TCGCCTAGTG GATTCTGGCT TTTTCGATAA CATCCCGCTT 
CCTAAATCTG ACAGTCAAGA GAAGACCGAA ACCATAAAGC CTGATTCTCA ATCCAGACCC 
AGTGGCCTCA CCACGCTGGT AAAGCTGAGC TCAAATGAAG TGCCTTCCAA AGAGTTTCTT 
AACAGACGAT ACATGCCTGA AACTGATGAG CGCAGACGAG GTGAAACCGC ATCGCCTCGC 
AACTGGAAGG AAGACTTTTT GGCCATGAAG GAGAGGGAGC CACCGGACTC CTGGGAAATG 
GAGGAGCTTG CTGATCCTCC TGCGTCCTCC CAGTCCCCCA TACAGAAGCC ATGGAAAGGA 
GCAGCGGGTT TGATTCCTAA AACTGTAGAC ATTGTGAAGA GATCCACGAC TGACCCTAAA 
GAGAAACGTC AAAGAAAGAA GGCTGAGCAA GACTCCAAAT CTATGCCCGT TGCAGTGGAA 
GTCTTCAGTT CTCCATCTCC GTTACCAAAA GATCCCGTTC AGCGCCGGCA GCAGCTGGAG 
ACACTGATGG ACCAGATCTC TGGCTCCTTC AGTTTCATGC AGGAGTCTCT TTTGGATGGA 
GAATCTTCAC CTGTCAACAC TCAAACAAAA AGATGCCGTC CATCTCCAGG CTCCTCCACT 
CCAATCGTAC AGAGAGAATT GACCAAAAGC CCTTCAGATA TTCTGCCTTC ATCGCAGCGG 
AGCACTCCTT TGCGGATTCT GCTGTCTGGA GAGGGTAAAG GCTGTCTGTC CAATGGAGAT 
CGCTCCATAA ATGGCTCTGA TCTGGAGCTG CACTCTGAAG ATAAGCCACG GAAGCAGGCT 
GAGGGCTTCA ACTCACCTCC ACTGTACCGC AGAGGATCCT CCATTTCAGT TTCTCTAGAA 
AACCAAAGCA CTGTACAGGC AGGAAGGCAG ATGTTATGCA ATGGAGTATC GAGCTCTGGT 
TCTGCACAGA CATTTTCAAC CCCACCCAGT CGCAGATCCA TCAGCGCAGA AAACCCCTTC 
CACAACATTC ACTCTGTGTT TAATGTGATC GGCGAGAGCT CAGGGATGAA GGCAGATGAG 
AGCGGTTTCT CGGAGTCCAT ACATCGCAGT TTCACGTCAG CCAAAACCTC CAGTGTAACC 
ACTGCCAGCA CTCAGACTCC ACCTGAACTT AACCCACCCG AGGAAGACCT GCAGATCGAA 
GGCCAGTATC CTCTGGAGTG TGCAGTCAGT GCTGGTGGTC CCGTGTTCTC CAGCTCCCAT 
TCTCGTGTGG GTCAGTCGTG TTACTCTCGC GGGGCAGTCA GAGGTGGTTA TGATGCCTAC 
AGAGTGAATG TACGTTCCCC AGGAGGAAGC TTCATGTCCC AGACACACAG AGAGCCTGCG 
TCTGCACTTT ACATGGCCAG AGAAAACGGC TATCAGCAAA ACTTCAAGAG AGGAGCAGGC 
ACAGCAACTC AGAGGAGCAG CGCCGGCTGG AGCGACTCTT CTCAAGTGAG CAGTCCGGAT 
CGAGATGGGG CGTATCCTCT GGATTCAGGA CTTAGTGACA CCCTGTCTAT CCCGGCCATG 
GAGGTGCCCA TGAATCCACA AGGCCCGCAC ACCCTGATGC CTGTCCATGT GTACCCACTC 
ACCCAGCTCC GTGTGGCATT CTCTGCTGCT CGCACCGCCA ACTTTGCGCC GGGCACTTTA 
GACCAGCCCA TCGCCTTTGA TCTGCTCCAC ACCAACCTGG GTGACATGTT CGACACTGGC 
TCTGGTCGCT TCACCTGCCC AGCCACCGGT GCCTACGTCT TCATCTTCCA CATCCTGAAG 
CTGGCCATCA GCGTGCCGCT CTACATCAAC CTCATGCGCA ACGAAGAGGT GATGGTGTCC 
GCGTATGCCA ACGACGGTGC CCCAGATCAC GAAACGGCCA GTAATCATGC TGTCCTGCAG 
CTGTTTCAAG GCGATCAGGT GTGGCTCAGG CTGCACCGTG GCGCCATCTA TGGCAGCAGC 
TGGAAGTATA GCACCTTCTC TGGATTCCTG CTGTACCAGG ATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Identification of target genes downstream of semaphorin6A/PlexinA2 signaling in zebrafish.
Developmental dynamics : an official publication of the American Association of Anatomists246(7)539-549(2017 Jul)
Emerson SE,St Clair RM,Waldron AL,Bruno SR,Duong A,Driscoll HE,Ballif BA,McFarlane S,Ebert AM

Amyloid-like Self-Assembly of a Cellular Compartment.
Cell166(3)637-650(2016 Jul)
Boke E,Ruer M,W?hr M,Coughlin M,Lemaitre R,Gygi SP,Alberti S,Drechsel D,Hyman AA,Mitchison TJ

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

Structural insights into the C1q domain of Caprin-2 in canonical Wnt signaling.
The Journal of biological chemistry289(49)34104-13(2014 Dec)
Miao H,Jia Y,Xie S,Wang X,Zhao J,Chu Y,Zhou Z,Shi Z,Song X,Li L

Zebrafish kr?ppel-like factor 4a represses intestinal cell proliferation and promotes differentiation of intestinal cell lineages.
PloS one6(6)e20974(2011)
Li IC,Chan CT,Lu YF,Wu YT,Chen YC,Li GB,Lin CY,Hwang SP