rftn2 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	rftn2
Entrez Gene ID	406729
Full Name	raftlin family member 2
Synonyms	wu:fi98e03,zgc:56544
General protein information	Preferred Names raftlin family member 2 Names raftlin-2
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_213420.1	NP_998585.1	raftlin-2

Pathways from BioSystems

Homologies

Danio rerio (zebrafish)	rftn2	NP_998585.1
Canis lupus familiaris (dog)	RFTN2	XP_003434341.1
Mus musculus (house mouse)	Rftn2	NP_082989.1
Rattus norvegicus (Norway rat)	Rftn2	XP_343572.4
Pan troglodytes (chimpanzee)	RFTN2	XP_001169323.2
	RFTN2	XP_001089253.1
Gallus gallus (chicken)	RFTN2	NP_001264351.1
Homo sapiens (human)	RFTN2	NP_653230.2

Gene Ontology
Bibliography

Related articles in PubMed

Gene expression profiling of granule cells and Purkinje cells in the zebrafish cerebellum.
Takeuchi M, Yamaguchi S, Sakakibara Y, Hayashi T, Matsuda K, Hara Y, Tanegashima C, Shimizu T, Kuraku S, Hibi M
The Journal of comparative neurology525(7)1558-1585(2017 May)

Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

The fate of recent duplicated genes following a fourth-round whole genome duplication in a tetraploid fish, common carp (Cyprinus carpio).
Li JT, Hou GY, Kong XF, Li CY, Zeng JM, Li HD, Xiao GB, Li XM, Sun XW
Scientific reports58199(2015 Feb)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following rftn2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the rftn2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa32478	NM_213420.1 Latest version!	Danio rerio raftlin family member 2 (rftn2), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

rftn2 ( NM_213420.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_998585.1 Danio rerio raftlin family member 2 (rftn2), mRNA.

Price & Availability↑

CloneID	ODa32478
Clone ID Related Accession (Same CDS sequence)	NM_213420.1
Accession Version	NM_213420.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1314bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-01-26
Organism	Danio rerio(zebrafish)
Product	raftlin-2
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC051615.1. ##Evidence-Data-START## Transcript exon combination :: BC051615.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGGGATGTG GACTACGGAA ACTGGAGGAC CCGGAGGACA GCAGCCCGGG GAAAACCTAC 
TCCACGTTGA AGAGACCAAA AGTTGAGACC AAAACAGACT CCGCGTACGA GTATGTGCTG 
CTAGACTTCA GTCTGGAAGG CAGTCGGCCT ACTGTGCAGT ATCTGTCCTC TCTATGTGAG 
CTGCCTCATG CCCTCCAGTC CTACTACACC CAGGGCTACG TACTGGCCGC CTTGCATCCC 
ATCATCCTAT CTGTGGGACG GACACGCTTT CTGCCCTGCA GCCTGCTGTA CCGGGCCATA 
CTGGTTCGGC CACGATCCAG TAGTCACACA GTGCCGATGA TTGACAGTTT GCCAGTGTTG 
CGAGTGGAAG AGTGGCCCCT GCCAGGAGAA TCTCTGACCA GCGATACAGT GAGACTCCTC 
ATTGACCGGG TGAACAGTTA TGCCAGGGGT GGCGTGAGGT TTGTGGGTTC AGTGCTCCAG 
CAGGCTGGAG GAGGGGGATG TAATGGTATA GTGCCCAGTC CCAGAAGGGG CTGCCGCTCC 
CCGCCCCGCA CCCCTCCTCG CACACCACCC GGAGACACAG ATCTGGAGGG CCGCAGTTAC 
AGCCCAGATC TGAGATTGTT GGTGCTGTTC CATTCTTGGG CTCCGGGTTG TGCCCCGCTG 
GATTCGTTGG CCTGCTGTTA CCACCAGGGT GCCCTGTCCA TGCGCGTTTC CAGGAAAGGT 
CAAGTTGTAA GTGCTCTGGA AGCAGATTGG CTGGAACTGA CCGCAGCTTA TTACCGCAAG 
GGCTGGTCAT TGGTTGATTC CTTTGTATAC TGGGATACCC CTAAAGGAGA GCCAGTGCCC 
AGGTCTCTAG AGGGTCTGTT TGTCTATGAG GAGAAGAGCA CAGCGCCACC TGCCAATGAC 
ACCATTGTAG TGGAACAGTG GACTGTTATT GAGGATTCAA ATGTGAAGAC AGACTATGGG 
CCTCTGCTCC ACACGTTAGC AGAGTTTGGC TGGCTGCTCA CCTGTGTTTT GCCCACCCCG 
ATTATTCGCC ATGACAGTGA AGGGAATTTG GCCACTAAGC AAGTGGTTTT CCTGCAAAGA 
CCAGTCAAGG GTCATCCGGT ACCACAGCAC AACCAGGGTT CGACACGGAG AGAGGTGTCC 
AGTCGCTCTG TGAGCGGAGG AGTGGACGAG GGGCACGCTG AGCTCTCATC TCCATGCTCA 
GGCGGGATCG GTGGCTTCCC TGTGTTTGGA GGAGGCTTTC CCAGCTCTCT CTCTCATCTG 
GATGAGGGAG GATATGAGCC GGACGATGGG GCAGCAGAGG TCACCTGTAT GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_998585.1
CDS	270..1583
Translation	MGCGLRKLEDPEDSSPGKTYSTLKRPKVETKTDSAYEYVLLDFSLEGSRPTVQYLSSLCELPHALQSYYTQGYVLAALHPIILSVGRTRFLPCSLLYRAILVRPRSSSHTVPMIDSLPVLRVEEWPLPGESLTSDTVRLLIDRVNSYARGGVRFVGSVLQQAGGGGCNGIVPSPRRGCRSPPRTPPRTPPGDTDLEGRSYSPDLRLLVLFHSWAPGCAPLDSLACCYHQGALSMRVSRKGQVVSALEADWLELTAAYYRKGWSLVDSFVYWDTPKGEPVPRSLEGLFVYEEKSTAPPANDTIVVEQWTVIEDSNVKTDYGPLLHTLAEFGWLLTCVLPTPIIRHDSEGNLATKQVVFLQRPVKGHPVPQHNQGSTRREVSSRSVSGGVDEGHAELSSPCSGGIGGFPVFGGGFPSSLSHLDEGGYEPDDGAAEVTCM

Target ORF information:

RefSeq Version	NM_213420.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio raftlin family member 2 (rftn2), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_213420.1

ORF Insert Sequence:

ATGGGATGTG GACTACGGAA ACTGGAGGAC CCGGAGGACA GCAGCCCGGG GAAAACCTAC 
TCCACGTTGA AGAGACCAAA AGTTGAGACC AAAACAGACT CCGCGTACGA GTATGTGCTG 
CTAGACTTCA GTCTGGAAGG CAGTCGGCCT ACTGTGCAGT ATCTGTCCTC TCTATGTGAG 
CTGCCTCATG CCCTCCAGTC CTACTACACC CAGGGCTACG TACTGGCCGC CTTGCATCCC 
ATCATCCTAT CTGTGGGACG GACACGCTTT CTGCCCTGCA GCCTGCTGTA CCGGGCCATA 
CTGGTTCGGC CACGATCCAG TAGTCACACA GTGCCGATGA TTGACAGTTT GCCAGTGTTG 
CGAGTGGAAG AGTGGCCCCT GCCAGGAGAA TCTCTGACCA GCGATACAGT GAGACTCCTC 
ATTGACCGGG TGAACAGTTA TGCCAGGGGT GGCGTGAGGT TTGTGGGTTC AGTGCTCCAG 
CAGGCTGGAG GAGGGGGATG TAATGGTATA GTGCCCAGTC CCAGAAGGGG CTGCCGCTCC 
CCGCCCCGCA CCCCTCCTCG CACACCACCC GGAGACACAG ATCTGGAGGG CCGCAGTTAC 
AGCCCAGATC TGAGATTGTT GGTGCTGTTC CATTCTTGGG CTCCGGGTTG TGCCCCGCTG 
GATTCGTTGG CCTGCTGTTA CCACCAGGGT GCCCTGTCCA TGCGCGTTTC CAGGAAAGGT 
CAAGTTGTAA GTGCTCTGGA AGCAGATTGG CTGGAACTGA CCGCAGCTTA TTACCGCAAG 
GGCTGGTCAT TGGTTGATTC CTTTGTATAC TGGGATACCC CTAAAGGAGA GCCAGTGCCC 
AGGTCTCTAG AGGGTCTGTT TGTCTATGAG GAGAAGAGCA CAGCGCCACC TGCCAATGAC 
ACCATTGTAG TGGAACAGTG GACTGTTATT GAGGATTCAA ATGTGAAGAC AGACTATGGG 
CCTCTGCTCC ACACGTTAGC AGAGTTTGGC TGGCTGCTCA CCTGTGTTTT GCCCACCCCG 
ATTATTCGCC ATGACAGTGA AGGGAATTTG GCCACTAAGC AAGTGGTTTT CCTGCAAAGA 
CCAGTCAAGG GTCATCCGGT ACCACAGCAC AACCAGGGTT CGACACGGAG AGAGGTGTCC 
AGTCGCTCTG TGAGCGGAGG AGTGGACGAG GGGCACGCTG AGCTCTCATC TCCATGCTCA 
GGCGGGATCG GTGGCTTCCC TGTGTTTGGA GGAGGCTTTC CCAGCTCTCT CTCTCATCTG 
GATGAGGGAG GATATGAGCC GGACGATGGG GCAGCAGAGG TCACCTGTAT GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene expression profiling of granule cells and Purkinje cells in the zebrafish cerebellum.
The Journal of comparative neurology525(7)1558-1585(2017 May)
Takeuchi M,Yamaguchi S,Sakakibara Y,Hayashi T,Matsuda K,Hara Y,Tanegashima C,Shimizu T,Kuraku S,Hibi M

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 Mar)
Bay?s ?,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

The fate of recent duplicated genes following a fourth-round whole genome duplication in a tetraploid fish, common carp (Cyprinus carpio).
Scientific reports58199(2015 Feb)
Li JT,Hou GY,Kong XF,Li CY,Zeng JM,Li HD,Xiao GB,Li XM,Sun XW