galnt6 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	galnt6
Entrez Gene ID	406477
Full Name	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6)
Synonyms	fc23d02,fc56f12,wu:fc23d02,wu:fc56f12,zgc:77836
General protein information	Preferred Names UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) Names polypeptide N-acetylgalactosaminyltransferase 6
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_213196.1	NP_998361.1	polypeptide N-acetylgalactosaminyltransferase 6

Pathways from BioSystems

Homologies

Mus musculus (house mouse)	Galnt6	NP_001155239.1
Canis lupus familiaris (dog)	GALNT6	XP_850161.1
Xenopus tropicalis (tropical clawed frog)	LOC100497888	XP_002933739.1
Pan troglodytes (chimpanzee)	GALNT6	XP_001147578.2
Bos taurus (cattle)	GALNT6	NP_001015534.1
Homo sapiens (human)	GALNT6	NP_009141.2
Danio rerio (zebrafish)	galnt6	NP_998361.1
	GALNT6	XP_001083664.1
Rattus norvegicus (Norway rat)	Galnt6	NP_001165534.1
Gallus gallus (chicken)	GALNT6	NP_001026749.1
Xenopus tropicalis (tropical clawed frog)	galnt6	XP_004911960.1

Gene Ontology
Bibliography

Related articles in PubMed

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

A live zebrafish-based screening system for human nuclear receptor ligand and cofactor discovery.
Tiefenbach J, Moll PR, Nelson MR, Hu C, Baev L, Kislinger T, Krause HM
PloS one5(3)e9797(2010 Mar)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following galnt6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the galnt6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa32559	NM_213196.1 Latest version!	Danio rerio UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) (galnt6), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

galnt6 ( NM_213196.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_998361.1 Danio rerio UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) (galnt6), mRNA.

Price & Availability↑

CloneID	ODa32559
Clone ID Related Accession (Same CDS sequence)	NM_213196.1
Accession Version	NM_213196.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1860bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-06-26
Organism	Danio rerio(zebrafish)
Product	polypeptide N-acetylgalactosaminyltransferase 6
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC067340.1. ##Evidence-Data-START## Transcript exon combination :: BC067340.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGCGTTTAA GGCGTCGTCT TTCGCCCCTG AAGCTTGCCA TTGTCGGTGG GACACTTTTT 
ATGCTCATTC TAGTGGTGCT CCAGAGAGAC GTTAACAGCG GTGCTCTTCA GGACCCCTGG 
CTGCAAGATC TCTCCAACAA AAAGGAGAGG GTGTTCGAGA TGGTCCGCGG GGCTGTCAAT 
AACTTTGCCT TCCAAATAGG AGCCCCTGTG CGTCCATCAG TGGAAGTACA ACCCACCCCG 
GACCGAAACT GCCCATCTGG CTTCTACACT CAGCGGGAGC TTAAACCATG GATTGAGAGG 
CCTCCTGAAA ACCCTCAAGC CCCAGGAGCC GATGGTGTAC CTTTCCAGTA TGACCGGATG 
ACCAAAGAGG AGGAGAAGGA GAAGCAGGAG GGCATGACCA GACACTGCTT TAACCAATTC 
GCCAGTGACC GAATCTCCTT GCACCGCACT CTTGGAGATG ACACCCGTCC GCCTGAGTGT 
GTCGATCGCA AGTTTCGTCG ATGTCCTGCT CTTCCCACCA CCAGCGTGAT CATCGTGTTT 
CATAATGAAG CATGGTCAAC ACTACTGCGC ACTGTGTACA GCGTTCTGCA CACCTCCCCA 
GCGGCCTTTC TCAAAGAAAT CATAATGGTG GATGACGCCA GCACTGCAGA ACACCTTCAT 
GGAAAGCTGG AGGAGTATGT GAAAGCACTG AAGATCGTGA AGGTGGTGCG TCAGCCCGAG 
AGGAAAGGCC TGATCACAGC GAGGCTTCTT GGAGCAAGTA AAGCTGAAGG AGAAATTCTC 
ACGTTCTTGG ACGCTCACTG TGAGTGTTTC CATGGCTGGC TCGAGCCTCT TCTTGCTCGA 
ATTGTCGAAG AGCCCACGGC CGTTGTGAGC CCTGAGATCA CAACCATCGA TTTAAACACT 
TTCCAGTTCC ACAAACCTGT GGCGACGGCT CGTGCACATA ACAGGGGCAA CTTTGACTGG 
AGTCTTACTT TTGGCTGGGA GGGAATTCCA GATTATGAGA ACGCTAAACG CAAGGATGAG 
ACCTACCCTG TAAAAACTCC AACATTTGCT GGTGGCTTGT TCTCTATATC TAAGGCCTAC 
TTTGAGAAAA TTGGGACGTA TGATGACAAA ATGGAGATCT GGGGTGGTGA AAATGTCGAG 
ATGTCTTTCA GGGTATGGCA GTGTGGTGGA CAGTTGGAAA TAATCCCCTG CTCTGTCGTT 
GGTCATGTGT TTCGCACCAA GAGTCCTCAC ACCTTCCCCA AAGGTACAGA GGTCATTACA 
CGTAACCAGG TGCGCTTGGC GGAGGTGTGG ATGGACGACT ACAAGCTGAT TTTCTACAGA 
CGCAGCCAAA GCGCAGCTAA AATGGCCAAA GAAAAAGGCT TTGGGGATAT TTCTGACCGT 
CTGAAACTCC GAGAAGATTT ACAGTGCAAG AACTTTTCCT GGTACCTATC CAATGTCTAC 
CCAGAAGCCT TTGTCCCCGA TCTCTCGCCA GTCAAGTTTG GAGCTCTCAA GAATAGAGGA 
GCACAACAAT GTCTGGATGT CGGAGAAAGT AACAATGGGG GAAAGCCTGT GATTATGTAT 
ACTTGTCACA ACATGGGTGG TAATCAGTAT TTTGAATACA CGTCACATAA GGAGCTAAGG 
CATAACATAG GAAAGCAGCT GTGTCTGCAA GCGTCTCCTT ACCCAGAGCC GGTGAAGATC 
GAGCTTTGTA CACTGAAGGG CAAAGGCAGT AGTTTGGCTC CTGAACAAGA ATGGCTGATC 
ACAGAGGAGC AACTCTTGAA AAATCCGTCC TCTGGAAAAT GCCTCCATAA GAAGGGAGAC 
AAGATCTTAA TGAGTCCCTG CAACCCAGAC GACCATCATC AGCAGTGGGC TTTCAGCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_998361.1
CDS	159..2018
Translation	MRLRRRLSPLKLAIVGGTLFMLILVVLQRDVNSGALQDPWLQDLSNKKERVFEMVRGAVNNFAFQIGAPVRPSVEVQPTPDRNCPSGFYTQRELKPWIERPPENPQAPGADGVPFQYDRMTKEEEKEKQEGMTRHCFNQFASDRISLHRTLGDDTRPPECVDRKFRRCPALPTTSVIIVFHNEAWSTLLRTVYSVLHTSPAAFLKEIIMVDDASTAEHLHGKLEEYVKALKIVKVVRQPERKGLITARLLGASKAEGEILTFLDAHCECFHGWLEPLLARIVEEPTAVVSPEITTIDLNTFQFHKPVATARAHNRGNFDWSLTFGWEGIPDYENAKRKDETYPVKTPTFAGGLFSISKAYFEKIGTYDDKMEIWGGENVEMSFRVWQCGGQLEIIPCSVVGHVFRTKSPHTFPKGTEVITRNQVRLAEVWMDDYKLIFYRRSQSAAKMAKEKGFGDISDRLKLREDLQCKNFSWYLSNVYPEAFVPDLSPVKFGALKNRGAQQCLDVGESNNGGKPVIMYTCHNMGGNQYFEYTSHKELRHNIGKQLCLQASPYPEPVKIELCTLKGKGSSLAPEQEWLITEEQLLKNPSSGKCLHKKGDKILMSPCNPDDHHQQWAFS

Target ORF information:

RefSeq Version	NM_213196.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) (galnt6), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_213196.1

ORF Insert Sequence:

ATGCGTTTAA GGCGTCGTCT TTCGCCCCTG AAGCTTGCCA TTGTCGGTGG GACACTTTTT 
ATGCTCATTC TAGTGGTGCT CCAGAGAGAC GTTAACAGCG GTGCTCTTCA GGACCCCTGG 
CTGCAAGATC TCTCCAACAA AAAGGAGAGG GTGTTCGAGA TGGTCCGCGG GGCTGTCAAT 
AACTTTGCCT TCCAAATAGG AGCCCCTGTG CGTCCATCAG TGGAAGTACA ACCCACCCCG 
GACCGAAACT GCCCATCTGG CTTCTACACT CAGCGGGAGC TTAAACCATG GATTGAGAGG 
CCTCCTGAAA ACCCTCAAGC CCCAGGAGCC GATGGTGTAC CTTTCCAGTA TGACCGGATG 
ACCAAAGAGG AGGAGAAGGA GAAGCAGGAG GGCATGACCA GACACTGCTT TAACCAATTC 
GCCAGTGACC GAATCTCCTT GCACCGCACT CTTGGAGATG ACACCCGTCC GCCTGAGTGT 
GTCGATCGCA AGTTTCGTCG ATGTCCTGCT CTTCCCACCA CCAGCGTGAT CATCGTGTTT 
CATAATGAAG CATGGTCAAC ACTACTGCGC ACTGTGTACA GCGTTCTGCA CACCTCCCCA 
GCGGCCTTTC TCAAAGAAAT CATAATGGTG GATGACGCCA GCACTGCAGA ACACCTTCAT 
GGAAAGCTGG AGGAGTATGT GAAAGCACTG AAGATCGTGA AGGTGGTGCG TCAGCCCGAG 
AGGAAAGGCC TGATCACAGC GAGGCTTCTT GGAGCAAGTA AAGCTGAAGG AGAAATTCTC 
ACGTTCTTGG ACGCTCACTG TGAGTGTTTC CATGGCTGGC TCGAGCCTCT TCTTGCTCGA 
ATTGTCGAAG AGCCCACGGC CGTTGTGAGC CCTGAGATCA CAACCATCGA TTTAAACACT 
TTCCAGTTCC ACAAACCTGT GGCGACGGCT CGTGCACATA ACAGGGGCAA CTTTGACTGG 
AGTCTTACTT TTGGCTGGGA GGGAATTCCA GATTATGAGA ACGCTAAACG CAAGGATGAG 
ACCTACCCTG TAAAAACTCC AACATTTGCT GGTGGCTTGT TCTCTATATC TAAGGCCTAC 
TTTGAGAAAA TTGGGACGTA TGATGACAAA ATGGAGATCT GGGGTGGTGA AAATGTCGAG 
ATGTCTTTCA GGGTATGGCA GTGTGGTGGA CAGTTGGAAA TAATCCCCTG CTCTGTCGTT 
GGTCATGTGT TTCGCACCAA GAGTCCTCAC ACCTTCCCCA AAGGTACAGA GGTCATTACA 
CGTAACCAGG TGCGCTTGGC GGAGGTGTGG ATGGACGACT ACAAGCTGAT TTTCTACAGA 
CGCAGCCAAA GCGCAGCTAA AATGGCCAAA GAAAAAGGCT TTGGGGATAT TTCTGACCGT 
CTGAAACTCC GAGAAGATTT ACAGTGCAAG AACTTTTCCT GGTACCTATC CAATGTCTAC 
CCAGAAGCCT TTGTCCCCGA TCTCTCGCCA GTCAAGTTTG GAGCTCTCAA GAATAGAGGA 
GCACAACAAT GTCTGGATGT CGGAGAAAGT AACAATGGGG GAAAGCCTGT GATTATGTAT 
ACTTGTCACA ACATGGGTGG TAATCAGTAT TTTGAATACA CGTCACATAA GGAGCTAAGG 
CATAACATAG GAAAGCAGCT GTGTCTGCAA GCGTCTCCTT ACCCAGAGCC GGTGAAGATC 
GAGCTTTGTA CACTGAAGGG CAAAGGCAGT AGTTTGGCTC CTGAACAAGA ATGGCTGATC 
ACAGAGGAGC AACTCTTGAA AAATCCGTCC TCTGGAAAAT GCCTCCATAA GAAGGGAGAC 
AAGATCTTAA TGAGTCCCTG CAACCCAGAC GACCATCATC AGCAGTGGGC TTTCAGCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

A live zebrafish-based screening system for human nuclear receptor ligand and cofactor discovery.
PloS one5(3)e9797(2010 Mar)
Tiefenbach J,Moll PR,Nelson MR,Hu C,Baev L,Kislinger T,Krause HM