atf1 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	atf1
Entrez Gene ID	325609
Full Name	activating transcription factor 1
Synonyms	wu:fc92c07,zgc:64099
General protein information	Preferred Names activating transcription factor 1 Names cyclic AMP-dependent transcription factor ATF-1
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_199723.1	NP_956017.1	cyclic AMP-dependent transcription factor ATF-1

Pathways from BioSystems

Homologies

	ATF1	XP_001083228.1
Canis lupus familiaris (dog)	ATF1	XP_005636893.1
Mus musculus (house mouse)	Atf1	NP_031523.3
Mus musculus (house mouse)	Gm1862	XP_001474867.1
Danio rerio (zebrafish)	atf1	NP_956017.1
Homo sapiens (human)	ATF1	NP_005162.1
Pan troglodytes (chimpanzee)	ATF1	XP_001152537.1
Gallus gallus (chicken)	ATF1	XP_004949775.1
Xenopus tropicalis (tropical clawed frog)	atf1	NP_001005828.1
Bos taurus (cattle)	ATF1	NP_001068757.1
Rattus norvegicus (Norway rat)	Atf1	NP_001094365.1

Gene Ontology
Bibliography

Related articles in PubMed

Comparative transcriptome analyses indicate molecular homology of zebrafish swimbladder and mammalian lung.
Zheng W, Wang Z, Collins JE, Andrews RM, Stemple D, Gong Z
PloS one6(8)e24019(2011)

CREB activity modulates neural cell proliferation, midbrain-hindbrain organization and patterning in zebrafish.
Dworkin S, Heath JK, deJong-Curtain TA, Hogan BM, Lieschke GJ, Malaterre J, Ramsay RG, Mantamadiotis T
Developmental biology307(1)127-41(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following atf1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the atf1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa36661	NM_199723.1 Latest version!	Danio rerio activating transcription factor 1 (atf1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

atf1 ( NM_199723.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_956017.1 Danio rerio activating transcription factor 1 (atf1), mRNA.

Price & Availability↑

CloneID	ODa36661
Clone ID Related Accession (Same CDS sequence)	NM_199723.1
Accession Version	NM_199723.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 915bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-17
Organism	Danio rerio(zebrafish)
Product	cyclic AMP-dependent transcription factor ATF-1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC053252.1. ##Evidence-Data-START## Transcript exon combination :: BC053252.1, EH433867.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGGAGGAGG TCCAGCACAA TAATGGCTCT GAGTCTCAAC CTGTTTCCGT CGCCACAACT 
ATAACTGCCT CTCACCTATC ACAGATTGCC CAGATGTCTC TGGGTGGTAA TCCAGTGGCT 
GTGGTTCAGC TGCCCAGCGG TCAGTTTCAA GTTCAAGGCG TGATTCAGTC AGCACAGTCA 
TCAGTTATCC AGTCTCCACC AGTACAATCA CAGGGCCAAG GGTCTGACAG TGACGATTCT 
CAGGAATCAA GCGACAGCGG AGCATCAAAT CAGAAGTCAA GAGAGATCTT AGCTCGGCGC 
CCATCTTACA GGAAGATCCT AAATGATCTG TCAGCGGAGG AGCTGGCAAC TCAGAATGAG 
GGAGAAGAGG AAAGTTCCAC CTCCTCTGCC ATAACAAGCG TCTCACTCCC GACCCCAATC 
TACCAGACAA GCACTGGCCA ATATATTGCG ATTTCATCCA ATGGCTCTCT TCAGCTGGCC 
AGTGCTGGTT CAGAGGGTGT ACAAGGCCTA CAGACTCTCA CCATGTCCAA CTCCAACCCA 
AGCCAGCCAA CTATACTGCA ATATGCTCAG ACTGCCGACG GACAACAGAT TCTGCTGCCT 
AGCAACCAGG TGGTTCTCCA AGGTGCAGGA GGAGAAATGC AAGCTTATCA GATCCGCTCC 
TCTTCCTCCT CGCTGCCTCA GACTGTTGTC ATGACTTCAC CTGTTATCAA CTCTCAGGGC 
AAGAGCGACG ACCCACAAAT GAAGAGAGAG ATACGGCTGG CCAAGAACAG GGAGGCAGCC 
AGAGAGTGTC GCCGAAAGAA AAAGGAGTAT GTGAAGTGTT TGGAGAACCG CGTGGCTGTG 
CTGGAGAATC AGAACAAGAC TCTTATCGAG GAGCTCAAGA CATTAAAGGA CCTGTACTGT 
GTTAAAACTG GCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_956017.1
CDS	160..1074
Translation	MEEVQHNNGSESQPVSVATTITASHLSQIAQMSLGGNPVAVVQLPSGQFQVQGVIQSAQSSVIQSPPVQSQGQGSDSDDSQESSDSGASNQKSREILARRPSYRKILNDLSAEELATQNEGEEESSTSSAITSVSLPTPIYQTSTGQYIAISSNGSLQLASAGSEGVQGLQTLTMSNSNPSQPTILQYAQTADGQQILLPSNQVVLQGAGGEMQAYQIRSSSSSLPQTVVMTSPVINSQGKSDDPQMKREIRLAKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCVKTG

Target ORF information:

RefSeq Version	NM_199723.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio activating transcription factor 1 (atf1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_199723.1

ORF Insert Sequence:

ATGGAGGAGG TCCAGCACAA TAATGGCTCT GAGTCTCAAC CTGTTTCCGT CGCCACAACT 
ATAACTGCCT CTCACCTATC ACAGATTGCC CAGATGTCTC TGGGTGGTAA TCCAGTGGCT 
GTGGTTCAGC TGCCCAGCGG TCAGTTTCAA GTTCAAGGCG TGATTCAGTC AGCACAGTCA 
TCAGTTATCC AGTCTCCACC AGTACAATCA CAGGGCCAAG GGTCTGACAG TGACGATTCT 
CAGGAATCAA GCGACAGCGG AGCATCAAAT CAGAAGTCAA GAGAGATCTT AGCTCGGCGC 
CCATCTTACA GGAAGATCCT AAATGATCTG TCAGCGGAGG AGCTGGCAAC TCAGAATGAG 
GGAGAAGAGG AAAGTTCCAC CTCCTCTGCC ATAACAAGCG TCTCACTCCC GACCCCAATC 
TACCAGACAA GCACTGGCCA ATATATTGCG ATTTCATCCA ATGGCTCTCT TCAGCTGGCC 
AGTGCTGGTT CAGAGGGTGT ACAAGGCCTA CAGACTCTCA CCATGTCCAA CTCCAACCCA 
AGCCAGCCAA CTATACTGCA ATATGCTCAG ACTGCCGACG GACAACAGAT TCTGCTGCCT 
AGCAACCAGG TGGTTCTCCA AGGTGCAGGA GGAGAAATGC AAGCTTATCA GATCCGCTCC 
TCTTCCTCCT CGCTGCCTCA GACTGTTGTC ATGACTTCAC CTGTTATCAA CTCTCAGGGC 
AAGAGCGACG ACCCACAAAT GAAGAGAGAG ATACGGCTGG CCAAGAACAG GGAGGCAGCC 
AGAGAGTGTC GCCGAAAGAA AAAGGAGTAT GTGAAGTGTT TGGAGAACCG CGTGGCTGTG 
CTGGAGAATC AGAACAAGAC TCTTATCGAG GAGCTCAAGA CATTAAAGGA CCTGTACTGT 
GTTAAAACTG GCTAG