irf2bpl cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	irf2bpl
Entrez Gene ID	324723
Full Name	interferon regulatory factor 2 binding protein-like
Synonyms	wu:fc39d10,wu:fj46f11,zgc:73290,zgc:77204
General protein information	Preferred Names interferon regulatory factor 2 binding protein-like Names interferon regulatory factor 2-binding protein-like
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_212687.1	NP_997852.1	interferon regulatory factor 2-binding protein-like

Pathways from BioSystems

Homologies

Bos taurus (cattle)	IRF2BPL	XP_002691170.1
Mus musculus (house mouse)	Irf2bpl	NP_665835.1
Danio rerio (zebrafish)	irf2bpl	NP_997852.1
Homo sapiens (human)	IRF2BPL	NP_078772.1
Pan troglodytes (chimpanzee)	IRF2BPL	XP_510088.3
	IRF2BPL	NP_001040589.1
Canis lupus familiaris (dog)	IRF2BPL	XP_005623753.1
Rattus norvegicus (Norway rat)	Irf2bpl	NP_001012488.1
Gallus gallus (chicken)	C14ORF4	XP_426978.4
Xenopus tropicalis (tropical clawed frog)	irf2bpl	NP_001123823.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Contrasted innate responses to two viruses in zebrafish: insights into the ancestral repertoire of vertebrate IFN-stimulated genes.
Briolat V, Jouneau L, Carvalho R, Palha N, Langevin C, Herbomel P, Schwartz O, Spaink HP, Levraud JP, Boudinot P
Journal of immunology (Baltimore, Md. : 1950)192(9)4328-41(2014 May)

Coherent but overlapping expression of microRNAs and their targets during vertebrate development.
Shkumatava A, Stark A, Sive H, Bartel DP
Genes & development23(4)466-81(2009 Feb)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following irf2bpl gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the irf2bpl cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa04697	NM_212687.1 Latest version!	Danio rerio interferon regulatory factor 2 binding protein-like (irf2bpl), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

irf2bpl ( NM_212687.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_997852.1 Danio rerio interferon regulatory factor 2 binding protein-like (irf2bpl), mRNA.

Price & Availability↑

CloneID	ODa04697
Clone ID Related Accession (Same CDS sequence)	NM_212687.1
Accession Version	NM_212687.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1989bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	interferon regulatory factor 2-binding protein-like
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC060929.1. ##Evidence-Data-START## Transcript exon combination :: BC060929.1 [ECO:0000332] ##Evidence-Data-END##

ATGTCTTCGG CGCAGGTCTC CTCGTCGAGG AGACAGTCGT GTTATCTGTG CGACCTGCCG 
CGCATGCCGT GGGCGATGAT TTGGGATTTT ACGGAGCCCG TGTGCAGGGG TTGCGTGAAT 
TACGAGGGCG CGGATCGGAT CGAGTTTGTT ATCGAGACCG CGCGCCATCT CAAGCGGGCT 
CATGGCTTCC AGGAGGGGAG ATCCCCGGGT CCAGCGCCGC CGCCTGCGGT CAAAGCACAA 
GCGGGCATGT CATCCAAGGA GTCTGTGCAG ATGAACCATG TGGACGGCTC GTCTAAATCG 
CAACAGCAGC AGCAGCAGCA GCAACAACAA CAGTCCGGCT TGGACCGATA CGCGCTCGCC 
ACCGAAAGAT CACGCTTTGA TTATTCCAGC ATCGGCGCGC ACAGGCTTCC GAACGGGCTC 
GGTGGACCGA ACGGCTTCCC CAAATCAGAC GACGGACCCC CCGAGCTTAA CCGACAGAGC 
CCGAACTCGC GTCGCAATCA CGGGCTGGTG GCGGTGTCGG GGCAGATGAG CGTGCCGCCG 
AACCTCCTCC CGCAGACGCT CCTGAACGGC CCACCGTCGT CGGCGAGTAT AGCGCAGCAC 
AGCCTTTCCG GACGAGCCCC TCCAGCCCCG GCCAGCATCG GACCCGCGCT CGCGCTCTCT 
GAACAAGGTA AACGACCCGG CTCGGTGTCC AGCACGGACC AAGAGAGAGA TCTGAAAGAG 
AAACAGCGTA ACGCTGAAGC TTTGACTGAA CTCGGTGAAA GTTTGAGGAA CAGGTCAGAG 
GAATGGACGA ATAAACCCAA AATAGTGAGA GACACACTGA TCACGCTTTC TAATTGCACT 
CCTTTTGACG TGAGGTTCAA GAAAGACCAT TCACTTCTAG GTAGAGTGTT TGCATTCGAT 
GCCACTTCCA AGCCCGGCAT GGACTATGAG CTGAAAATCT TTATTGAGTA TCCCAGTGGA 
TCTGGGAATG TGTTTTCCAG TGCGTCCGGT GTGGCTAAAC AGATGTACCA GGACTGCATG 
AAAGACTTTG GCAGAGGGCT TTCTTCTGGT TTTAAGTACC TGGAATATGA GAAAAAGCAT 
AGCTCTGGTG ACTGGAGGCT GCTGGGTGAT TTACTCCCAG AGTCTGTGCG TTTCTTTAAG 
GAGGGGCTCG GGGGAGAAAT GCTTCCTCAG CCTTACATTG ATGCCAGCTG CCCTCTGCTG 
CCCTCGGCGC TGGTCAACAT GCCTCGGGCT GTGGCGTCGG GAAGTGCGCT AAGAACGGGT 
GTTCGTAAAC GCAAAGCCTC CCCAGAACCA GACTCAGCGG AGGGCGAGCA GCAGAGACAG 
CAGTGGATGG CGAGTCAGAG CGAGGCACTT AAACTGACCA TGGCATCAGG CTCTTTCGCA 
GCCTCTCACG GCGGACCTCC ACCATTGGGG TCAGTACACT CTAGCCGAGC CACCCCACCC 
GAATCAGCCC CCCAGAACGG ACAATCCCCC ATGGCTGCGC TTATGTCGGT GGCAGACACT 
TTGGGTAATG CACACTCACC AAAGGACAGC AATTCTGTGC ACTCCACCAC ATCCACCCGA 
CATAACAGTA GCAGTCCAGT CTCCCCCGCC TCGGTCTCCG GACAGCGCCG TTTGGCATCC 
AGGAATGGGG AGATGGGTCT CTCCGGGACG CCGTCCCAAT CGGGTTCGCA TCAGGGCATG 
GATCAGGTGC ATCCTCAGAA CATTCCAGAC TCACCCATGG CCAATAACGG ACCCTTGTGT 
TGTACTATCT GCCACGAACG TTTAGAAGAC ACACACTTCG TACAGTGCCC GTCAGTTCCC 
AACCACAAGT TTTGTTTCCC GTGTTCCAGG GAGAGCATTA AAGCGCAGGG GGCAACAGGA 
GAGGTGTACT GCCCCAGCGG AGAGAAATGT CCCCTGGTAG GGTCAAACGT GCCTTGGGCT 
TTCATGCAAG GCGAGATAGC AACCATTTTA GCTGGGGATG TTAAGGTAAA GAAGGAAAGA 
GACCCTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_997852.1
CDS	77..2065
Translation	MSSAQVSSSRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRIEFVIETARHLKRAHGFQEGRSPGPAPPPAVKAQAGMSSKESVQMNHVDGSSKSQQQQQQQQQQQSGLDRYALATERSRFDYSSIGAHRLPNGLGGPNGFPKSDDGPPELNRQSPNSRRNHGLVAVSGQMSVPPNLLPQTLLNGPPSSASIAQHSLSGRAPPAPASIGPALALSEQGKRPGSVSSTDQERDLKEKQRNAEALTELGESLRNRSEEWTNKPKIVRDTLITLSNCTPFDVRFKKDHSLLGRVFAFDATSKPGMDYELKIFIEYPSGSGNVFSSASGVAKQMYQDCMKDFGRGLSSGFKYLEYEKKHSSGDWRLLGDLLPESVRFFKEGLGGEMLPQPYIDASCPLLPSALVNMPRAVASGSALRTGVRKRKASPEPDSAEGEQQRQQWMASQSEALKLTMASGSFAASHGGPPPLGSVHSSRATPPESAPQNGQSPMAALMSVADTLGNAHSPKDSNSVHSTTSTRHNSSSPVSPASVSGQRRLASRNGEMGLSGTPSQSGSHQGMDQVHPQNIPDSPMANNGPLCCTICHERLEDTHFVQCPSVPNHKFCFPCSRESIKAQGATGEVYCPSGEKCPLVGSNVPWAFMQGEIATILAGDVKVKKERDP

Target ORF information:

RefSeq Version	NM_212687.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio interferon regulatory factor 2 binding protein-like (irf2bpl), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_212687.1

ORF Insert Sequence:

ATGTCTTCGG CGCAGGTCTC CTCGTCGAGG AGACAGTCGT GTTATCTGTG CGACCTGCCG 
CGCATGCCGT GGGCGATGAT TTGGGATTTT ACGGAGCCCG TGTGCAGGGG TTGCGTGAAT 
TACGAGGGCG CGGATCGGAT CGAGTTTGTT ATCGAGACCG CGCGCCATCT CAAGCGGGCT 
CATGGCTTCC AGGAGGGGAG ATCCCCGGGT CCAGCGCCGC CGCCTGCGGT CAAAGCACAA 
GCGGGCATGT CATCCAAGGA GTCTGTGCAG ATGAACCATG TGGACGGCTC GTCTAAATCG 
CAACAGCAGC AGCAGCAGCA GCAACAACAA CAGTCCGGCT TGGACCGATA CGCGCTCGCC 
ACCGAAAGAT CACGCTTTGA TTATTCCAGC ATCGGCGCGC ACAGGCTTCC GAACGGGCTC 
GGTGGACCGA ACGGCTTCCC CAAATCAGAC GACGGACCCC CCGAGCTTAA CCGACAGAGC 
CCGAACTCGC GTCGCAATCA CGGGCTGGTG GCGGTGTCGG GGCAGATGAG CGTGCCGCCG 
AACCTCCTCC CGCAGACGCT CCTGAACGGC CCACCGTCGT CGGCGAGTAT AGCGCAGCAC 
AGCCTTTCCG GACGAGCCCC TCCAGCCCCG GCCAGCATCG GACCCGCGCT CGCGCTCTCT 
GAACAAGGTA AACGACCCGG CTCGGTGTCC AGCACGGACC AAGAGAGAGA TCTGAAAGAG 
AAACAGCGTA ACGCTGAAGC TTTGACTGAA CTCGGTGAAA GTTTGAGGAA CAGGTCAGAG 
GAATGGACGA ATAAACCCAA AATAGTGAGA GACACACTGA TCACGCTTTC TAATTGCACT 
CCTTTTGACG TGAGGTTCAA GAAAGACCAT TCACTTCTAG GTAGAGTGTT TGCATTCGAT 
GCCACTTCCA AGCCCGGCAT GGACTATGAG CTGAAAATCT TTATTGAGTA TCCCAGTGGA 
TCTGGGAATG TGTTTTCCAG TGCGTCCGGT GTGGCTAAAC AGATGTACCA GGACTGCATG 
AAAGACTTTG GCAGAGGGCT TTCTTCTGGT TTTAAGTACC TGGAATATGA GAAAAAGCAT 
AGCTCTGGTG ACTGGAGGCT GCTGGGTGAT TTACTCCCAG AGTCTGTGCG TTTCTTTAAG 
GAGGGGCTCG GGGGAGAAAT GCTTCCTCAG CCTTACATTG ATGCCAGCTG CCCTCTGCTG 
CCCTCGGCGC TGGTCAACAT GCCTCGGGCT GTGGCGTCGG GAAGTGCGCT AAGAACGGGT 
GTTCGTAAAC GCAAAGCCTC CCCAGAACCA GACTCAGCGG AGGGCGAGCA GCAGAGACAG 
CAGTGGATGG CGAGTCAGAG CGAGGCACTT AAACTGACCA TGGCATCAGG CTCTTTCGCA 
GCCTCTCACG GCGGACCTCC ACCATTGGGG TCAGTACACT CTAGCCGAGC CACCCCACCC 
GAATCAGCCC CCCAGAACGG ACAATCCCCC ATGGCTGCGC TTATGTCGGT GGCAGACACT 
TTGGGTAATG CACACTCACC AAAGGACAGC AATTCTGTGC ACTCCACCAC ATCCACCCGA 
CATAACAGTA GCAGTCCAGT CTCCCCCGCC TCGGTCTCCG GACAGCGCCG TTTGGCATCC 
AGGAATGGGG AGATGGGTCT CTCCGGGACG CCGTCCCAAT CGGGTTCGCA TCAGGGCATG 
GATCAGGTGC ATCCTCAGAA CATTCCAGAC TCACCCATGG CCAATAACGG ACCCTTGTGT 
TGTACTATCT GCCACGAACG TTTAGAAGAC ACACACTTCG TACAGTGCCC GTCAGTTCCC 
AACCACAAGT TTTGTTTCCC GTGTTCCAGG GAGAGCATTA AAGCGCAGGG GGCAACAGGA 
GAGGTGTACT GCCCCAGCGG AGAGAAATGT CCCCTGGTAG GGTCAAACGT GCCTTGGGCT 
TTCATGCAAG GCGAGATAGC AACCATTTTA GCTGGGGATG TTAAGGTAAA GAAGGAAAGA 
GACCCTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Contrasted innate responses to two viruses in zebrafish: insights into the ancestral repertoire of vertebrate IFN-stimulated genes.
Journal of immunology (Baltimore, Md. : 1950)192(9)4328-41(2014 May)
Briolat V,Jouneau L,Carvalho R,Palha N,Langevin C,Herbomel P,Schwartz O,Spaink HP,Levraud JP,Boudinot P

Coherent but overlapping expression of microRNAs and their targets during vertebrate development.
Genes & development23(4)466-81(2009 Feb)
Shkumatava A,Stark A,Sive H,Bartel DP