prtfdc1b cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	prtfdc1b
Entrez Gene ID	30765
Full Name	phosphoribosyl transferase domain containing 1
Synonyms	HPRT,hprt1,hprt1l,zgc:55561,zgc:86771
General protein information	Preferred Names phosphoribosyl transferase domain containing 1 Names phosphoribosyl transferase domain containing 1 HHGP protein
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_199518.3	NP_955812.2	phosphoribosyl transferase domain containing 1

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	PRTFDC1	XP_507700.1
Rattus norvegicus (Norway rat)	Prtfdc1	NP_001099597.1
Gallus gallus (chicken)	PRTFDC1	NP_001186514.1
Danio rerio (zebrafish)	LOC100334391	XP_002666638.2
Canis lupus familiaris (dog)	PRTFDC1	XP_005617043.1
Homo sapiens (human)	PRTFDC1	NP_064585.1
	LOC712819	XP_001101923.2
Bos taurus (cattle)	PRTFDC1	XP_003586817.2
Danio rerio (zebrafish)	prtfdc1	NP_955812.2
Xenopus tropicalis (tropical clawed frog)	prtfdc1	NP_001096362.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Junb controls lymphatic vascular development in zebrafish via miR-182.
Kiesow K, Bennewitz K, Miranda LG, Stoll SJ, Hartenstein B, Angel P, Kroll J, Schorpp-Kistner M
Scientific reports515007(2015 Oct)

Proteomic analysis of three gonad types of swamp eel reveals genes differentially expressed during sex reversal.
Sheng Y, Zhao W, Song Y, Li Z, Luo M, Lei Q, Cheng H, Zhou R
Scientific reports510176(2015 May)

The Rac1 regulator ELMO1 controls vascular morphogenesis in zebrafish.
Epting D, Wendik B, Bennewitz K, Dietz CT, Driever W, Kroll J
Circulation research107(1)45-55(2010 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following prtfdc1b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the prtfdc1b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa01058	NM_199518.3 Latest version!	Danio rerio phosphoribosyl transferase domain containing 1b (prtfdc1b), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

prtfdc1b ( NM_199518.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_955812.2 Danio rerio phosphoribosyl transferase domain containing 1b (prtfdc1b), mRNA.

Price & Availability↑

CloneID	ODa01058
Clone ID Related Accession (Same CDS sequence)	NM_199518.3
Accession Version	NM_199518.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 678bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-10-06
Organism	Danio rerio(zebrafish)
Product	phosphoribosyl transferase domain containing 1
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL726264.1 and CU914162.5. On Apr 12, 2014 this sequence version replaced NM_199518.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BC071440.1, GFIL01031556.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGGCAGGAT GGGAACGCAA ACAAACAGAC GTGGAAAAAG GAATTGTGAT CCCAGATGAC 
TGGCCTGGAT ACCCGCTGGA CCTGTTTACA TTTCCTGAGC ATTACTCCGA GGATCTGGAC 
TGTGTCTACA TTCCACACGG TGTTATCATG GACAGGATAG AGAGGTTGGC AAGAAATATC 
ATGGATGATC TTGGGGACCA TGACATTGTT GTCCTGTGCG TGCTAAAGGG AGGATATCAG 
TTCTGTGCTG ACCTGGTGGA CTGCATTAAA GTCCTGTGTT GCAACTCCAA CAAGACCCTT 
CCCATGAGGG TGGACTTCAT ACGACTCAAG AGCTACCTGA ACGATCAGTC AACCGAAGAT 
CTCCACATAG AAGGGGCAGA GAACCTGTCT GCGCTCAGTG GAAAGAATGT CCTGATAGTG 
GAGGCCATTG TGGACACTGG GAAGACCATG AAGGCTCTTC TGGATCACGT TGAAGCCTTC 
AAGCCTAAGA TGATAAAAGT AGCTGGATTG CTGGTGAAAA GAGTGGCCAG TAAGACAGGA 
TATCTGCCAG ACTATGTGGG ATTTGAGATC TCCAATCGTT TTGTGGTCGG CTATGCCTTG 
GATTACAATG AATACTTCAG AGACCTCAAT CACATCTGTG TGATTAGTGA CAGTGGGAAA 
CAGAAATACA AGATCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_955812.2
CDS	59..736
Translation	MAGWERKQTDVEKGIVIPDDWPGYPLDLFTFPEHYSEDLDCVYIPHGVIMDRIERLARNIMDDLGDHDIVVLCVLKGGYQFCADLVDCIKVLCCNSNKTLPMRVDFIRLKSYLNDQSTEDLHIEGAENLSALSGKNVLIVEAIVDTGKTMKALLDHVEAFKPKMIKVAGLLVKRVASKTGYLPDYVGFEISNRFVVGYALDYNEYFRDLNHICVISDSGKQKYKI

Target ORF information:

RefSeq Version	NM_199518.3
Organism	Danio rerio(zebrafish)
Definition	Danio rerio phosphoribosyl transferase domain containing 1b (prtfdc1b), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_199518.3

ORF Insert Sequence:

ATGGCAGGAT GGGAACGCAA ACAAACAGAC GTGGAAAAAG GAATTGTGAT CCCAGATGAC 
TGGCCTGGAT ACCCGCTGGA CCTGTTTACA TTTCCTGAGC ATTACTCCGA GGATCTGGAC 
TGTGTCTACA TTCCACACGG TGTTATCATG GACAGGATAG AGAGGTTGGC AAGAAATATC 
ATGGATGATC TTGGGGACCA TGACATTGTT GTCCTGTGCG TGCTAAAGGG AGGATATCAG 
TTCTGTGCTG ACCTGGTGGA CTGCATTAAA GTCCTGTGTT GCAACTCCAA CAAGACCCTT 
CCCATGAGGG TGGACTTCAT ACGACTCAAG AGCTACCTGA ACGATCAGTC AACCGAAGAT 
CTCCACATAG AAGGGGCAGA GAACCTGTCT GCGCTCAGTG GAAAGAATGT CCTGATAGTG 
GAGGCCATTG TGGACACTGG GAAGACCATG AAGGCTCTTC TGGATCACGT TGAAGCCTTC 
AAGCCTAAGA TGATAAAAGT AGCTGGATTG CTGGTGAAAA GAGTGGCCAG TAAGACAGGA 
TATCTGCCAG ACTATGTGGG ATTTGAGATC TCCAATCGTT TTGTGGTCGG CTATGCCTTG 
GATTACAATG AATACTTCAG AGACCTCAAT CACATCTGTG TGATTAGTGA CAGTGGGAAA 
CAGAAATACA AGATCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Junb controls lymphatic vascular development in zebrafish via miR-182.
Scientific reports515007(2015 Oct)
Kiesow K,Bennewitz K,Miranda LG,Stoll SJ,Hartenstein B,Angel P,Kroll J,Schorpp-Kistner M

Proteomic analysis of three gonad types of swamp eel reveals genes differentially expressed during sex reversal.
Scientific reports510176(2015 May)
Sheng Y,Zhao W,Song Y,Li Z,Luo M,Lei Q,Cheng H,Zhou R

The Rac1 regulator ELMO1 controls vascular morphogenesis in zebrafish.
Circulation research107(1)45-55(2010 Jul)
Epting D,Wendik B,Bennewitz K,Dietz CT,Driever W,Kroll J