pou3f1 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	pou3f1
Entrez Gene ID	30398
Full Name	POU class 3 homeobox 1
Synonyms	pou50,wu:fc09d06,zp-50,zp50,zp50pou
General protein information	Preferred Names POU class 3 homeobox 1 Names POU domain, class 3, transcription factor 1 Oct-6 POU domain gene 50 POU domain protein 50 POU domain protein ZP-50
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_131161.1	NP_571236.1	POU domain, class 3, transcription factor 1

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	POU3F1	XP_003639548.1
Mus musculus (house mouse)	Pou3f1	NP_035271.1
Danio rerio (zebrafish)	pou3f1	NP_571236.1
Gallus gallus (chicken)	POU3F1	NP_001026755.1
Xenopus tropicalis (tropical clawed frog)	pou3f1	NP_001016504.1

Gene Ontology
Bibliography

Related articles in PubMed

Pnrc2 regulates 3'UTR-mediated decay of segmentation clock-associated transcripts during zebrafish segmentation.
Gallagher TL, Tietz KT, Morrow ZT, McCammon JM, Goldrich ML, Derr NL, Amacher SL
Developmental biology429(1)225-239(2017 09)

Time point-based integrative analyses of deep-transcriptome identify four signal pathways in blastemal regeneration of zebrafish lower jaw.
Zhang H, Wang X, Lyu K, Gao S, Wang G, Fan C, Zhang XA, Yan J
Stem cells (Dayton, Ohio)33(3)806-18(2015 Mar)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The expression of the zebrafish Oct-6 protein is consistent with the notion that it functions as a 'competence factor' in promyelin cells to execute the myelination program.
Title: Comparison of sequence and function of the Oct-6 genes in zebrafish, chicken and mouse.

The following pou3f1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the pou3f1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa00767	NM_131161.1 Latest version!	Danio rerio POU class 3 homeobox 1 (pou3f1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

pou3f1 ( NM_131161.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_571236.1 Danio rerio POU class 3 homeobox 1 (pou3f1), mRNA.

Price & Availability↑

CloneID	ODa00767
Clone ID Related Accession (Same CDS sequence)	NM_131161.1
Accession Version	NM_131161.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1107bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2020-01-04
Organism	Danio rerio(zebrafish)
Product	POU domain, class 3, transcription factor 1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from X96422.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: X96422.1 [ECO:0000332] ##Evidence-Data-END##

ATGGCGACAA CAGCTCAGTA TATTCCGCGG AATAACTCAT TGCCTTCGAA CCCGCTAATG 
CATCCGGATT CAGACAGGAT GCACCAGGGG ACGACCTACA GAGAGGTGCA GAAAATGATG 
CACCACGAGT ACTTACAAGG GCTAGCGACC AACACGGGAC ATCCGATGAG CCTAACGCAC 
CACCAGTGGC TGCCAACCTC CAACACCGAC TGGACCAGCG GCACCCACAT CGGACAAGCA 
GAGCACAACA AAGCCAGCGT GCAGAGCAGG GAAGACCTGG GCAACGGCTA TCACAGATCG 
CATCTGGTCC ATCAGCCGAC GCAAAACAGT CACCACGGCT CATGGGCACC GACCACAACG 
CACCACTTAT CCCCGCTCTC TCCCGCCTCC AATGGTCACC AGTCTCTGGT TTACTCGCAG 
ACGGGCTACA CCATGCTCAG CCCCCAGCCT TCGCTGCACC ACGGCTTGCG GGACCCGCTC 
CACGACGACG CGGGCAGCCA CGACAACCAG ATGGAGTCGC CCCAGCAGCC GTTCAGCCAC 
CACCAGGACC ACTCGGACGA AGACGCCCCC AGCTCCGACG ACCTGGAGCA GTTCGCCAAA 
CAGTTCAAGC AGAGGCGCAT CAAACTTGGG TTTACGCAGG CGGACGTGGG CTTAGCTCTG 
GGCACGCTCT ACGGAAACGT CTTTTCCCAG ACCACCATCT GTAGATTTGA GGCTCTCCAA 
CTGAGTTTCA AGAACATGTG CAAACTTAAG CCTCTGCTAA ACAAATGGCT CGAGGAGACA 
GATTCAAACA CTGGCAGTCC CACGAATTTA GACAAGATTG CAGCACAGGG CCGGAAACGA 
AAGAAGAGGA CCTCCATCGA AGTCGGAGTG AAAGGGGCAC TGGAGAACCA TTTCTTAAAG 
TGTCCTAAGC CCTCAGCCCA CGAAATCACC ACTTTAGCGG GCACTCTGCA GTTGGAAAAA 
GAGGTTGTGC GCGTGTGGTT TTGCAACAGA AGACAGAAAG AGAAAAGAAT GACACCGGTG 
GGGGTCCCTC ATCCAACCAT GGAGGACGTT TACTCACAAG CGGAGACACC CCCTCTCCAT 
CACACGCTAC AGAGTCCTGT CCAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_571236.1
CDS	113..1219
Translation	MATTAQYIPRNNSLPSNPLMHPDSDRMHQGTTYREVQKMMHHEYLQGLATNTGHPMSLTHHQWLPTSNTDWTSGTHIGQAEHNKASVQSREDLGNGYHRSHLVHQPTQNSHHGSWAPTTTHHLSPLSPASNGHQSLVYSQTGYTMLSPQPSLHHGLRDPLHDDAGSHDNQMESPQQPFSHHQDHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDSNTGSPTNLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITTLAGTLQLEKEVVRVWFCNRRQKEKRMTPVGVPHPTMEDVYSQAETPPLHHTLQSPVQ

Target ORF information:

RefSeq Version	NM_131161.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio POU class 3 homeobox 1 (pou3f1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_131161.1

ORF Insert Sequence:

ATGGCGACAA CAGCTCAGTA TATTCCGCGG AATAACTCAT TGCCTTCGAA CCCGCTAATG 
CATCCGGATT CAGACAGGAT GCACCAGGGG ACGACCTACA GAGAGGTGCA GAAAATGATG 
CACCACGAGT ACTTACAAGG GCTAGCGACC AACACGGGAC ATCCGATGAG CCTAACGCAC 
CACCAGTGGC TGCCAACCTC CAACACCGAC TGGACCAGCG GCACCCACAT CGGACAAGCA 
GAGCACAACA AAGCCAGCGT GCAGAGCAGG GAAGACCTGG GCAACGGCTA TCACAGATCG 
CATCTGGTCC ATCAGCCGAC GCAAAACAGT CACCACGGCT CATGGGCACC GACCACAACG 
CACCACTTAT CCCCGCTCTC TCCCGCCTCC AATGGTCACC AGTCTCTGGT TTACTCGCAG 
ACGGGCTACA CCATGCTCAG CCCCCAGCCT TCGCTGCACC ACGGCTTGCG GGACCCGCTC 
CACGACGACG CGGGCAGCCA CGACAACCAG ATGGAGTCGC CCCAGCAGCC GTTCAGCCAC 
CACCAGGACC ACTCGGACGA AGACGCCCCC AGCTCCGACG ACCTGGAGCA GTTCGCCAAA 
CAGTTCAAGC AGAGGCGCAT CAAACTTGGG TTTACGCAGG CGGACGTGGG CTTAGCTCTG 
GGCACGCTCT ACGGAAACGT CTTTTCCCAG ACCACCATCT GTAGATTTGA GGCTCTCCAA 
CTGAGTTTCA AGAACATGTG CAAACTTAAG CCTCTGCTAA ACAAATGGCT CGAGGAGACA 
GATTCAAACA CTGGCAGTCC CACGAATTTA GACAAGATTG CAGCACAGGG CCGGAAACGA 
AAGAAGAGGA CCTCCATCGA AGTCGGAGTG AAAGGGGCAC TGGAGAACCA TTTCTTAAAG 
TGTCCTAAGC CCTCAGCCCA CGAAATCACC ACTTTAGCGG GCACTCTGCA GTTGGAAAAA 
GAGGTTGTGC GCGTGTGGTT TTGCAACAGA AGACAGAAAG AGAAAAGAAT GACACCGGTG 
GGGGTCCCTC ATCCAACCAT GGAGGACGTT TACTCACAAG CGGAGACACC CCCTCTCCAT 
CACACGCTAC AGAGTCCTGT CCAGTGA