igsf11 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	igsf11
Entrez Gene ID	100004469
Full Name	immunoglobulin superfamily member 11
Synonyms	sc:d812,seurat
General protein information	Preferred Names immunoglobulin superfamily member 11 Names immunoglobulin superfamily member 11 immunoglobulin superfamily 11 seu
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001278822.1	NP_001265751.1	immunoglobulin superfamily member 11 precursor

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	IGSF11	XP_005639575.1
Bos taurus (cattle)	IGSF11	NP_001070389.1
Homo sapiens (human)	IGSF11	NP_001015887.1
Rattus norvegicus (Norway rat)	Igsf11	NP_001013138.1
Gallus gallus (chicken)	IGSF11	XP_416568.3
	IGSF11	XP_001103243.2
Danio rerio (zebrafish)	igsf11	NP_001265751.1
Pan troglodytes (chimpanzee)	IGSF11	XP_001161639.1
Mus musculus (house mouse)	Igsf11	NP_733548.2
Xenopus tropicalis (tropical clawed frog)	igsf11	XP_002936281.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

Molecular Physiology of an Extra-renal Cl(-) Uptake Mechanism for Body Fluid Cl(-) Homeostasis.
Wang YF, Yan JJ, Tseng YC, Chen RD, Hwang PP
International journal of biological sciences11(10)1190-203(2015)

B cells in teleost fish act as pivotal initiating APCs in priming adaptive immunity: an evolutionary perspective on the origin of the B-1 cell subset and B7 molecules.
Zhu LY, Lin AF, Shao T, Nie L, Dong WR, Xiang LX, Shao JZ
Journal of immunology (Baltimore, Md. : 1950)192(6)2699-714(2014 Mar)

Melanophore migration and survival during zebrafish adult pigment stripe development require the immunoglobulin superfamily adhesion molecule Igsf11.
Eom DS, Inoue S, Patterson LB, Gordon TN, Slingwine R, Kondo S, Watanabe M, Parichy DM
PLoS genetics8(8)e1002899(2012)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Igsf11 is the first instance of an immunoglobulin superfamily member functioning in pigment cell development and body patterning.
Title: Melanophore migration and survival during zebrafish adult pigment stripe development require the immunoglobulin superfamily adhesion molecule Igsf11.

The following igsf11 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the igsf11 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa05306	NM_001278822.1 Latest version!	Danio rerio immunoglobulin superfamily member 11 (igsf11), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

igsf11 ( NM_001278822.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001265751.1 Danio rerio immunoglobulin superfamily member 11 (igsf11), mRNA.

Price & Availability↑

CloneID	ODa05306
Clone ID Related Accession (Same CDS sequence)	NM_001278822.1
Accession Version	NM_001278822.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1329bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-08-05
Organism	Danio rerio(zebrafish)
Product	immunoglobulin superfamily member 11 precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JQ796184.1. On Jul 17, 2013 this sequence version replaced XM_001343732.4. ##Evidence-Data-START## Transcript exon combination :: JQ796184.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476729, SAMEA4476730 [ECO:0000348] ##Evidence-Data-END##

ATGCTGAAAT TTCATAATTC GGACCTATGG ATTGCTTGGC TGGTCTTCTT TTGTGTGAAC 
GTGTGTGTGT ATGCGCTAGA AGTGACGGTC AGTCAGAGCA GTGTCCAGGT GGCCAGAGGT 
CAGGCGGCCG TCTTGCCCTG TACTTTCAGC ACCAGCGCCG CTCTCAATAA TCTCTACATC 
ATATGGATGG TCACACCGCT AGCCAACGCC AACCAGCCGG AGCAGGTGAT CATCTACCAG 
AGTGGTCAGG TATTCAGTTT AGCCAATCAC ATGAATGGGC GTGTGGGTTT CGTGTCCACC 
ATGCCCAGCA CAAGTGCCTC CATCTTCATC AATAACACTC AGCTGTCGGA CACCGGGACG 
TACCAGTGCC TGGTCAACAA CCTGCCGGAC CGCGGAGGAC GCAATATAGG AGTGATCGGC 
CTGACGGTGC TCGTTCCTCC ATCCATCCCG TCGTGTCGTG TCCAGGGCTC TCTGGACGTG 
GGCAGTGATG TGATGCTGTT GTGCGGTTCG GATGAAGGAA TCCCGACGCC CACCTACGCC 
TGGGAGAAGC AGGAGTCGGT GCCCAAACTG CCCCACAATG CCATGCAAGA TCAGATGCAG 
GGAACGGTGA CGCTCAGAAA CATCAGCAGC AGCACATCTG GACTCTACCA GTGCACAGCA 
TCAAACGCCA TCGGGAGAAG CACCTGCGTC CTCAACCTGC AGGTCACCGC ACCTCAGCCT 
CAGAGTGTGG GTCTGATCGC GGGCACCATC GCCACTGGTG TTCTGGCTCT GATCATCTGC 
AGTTCGCTGG TGTTGGTCTC GCTCTTCTAC TGGAGGAACA AGAACAAATA TGAGGAGGAG 
GAGATTCCCA ATGAGATCAG GGAAGACGAT CTCCCTCCGA AGCGATCCTC ATCGGTGAAA 
GCGTTTCAGG CGGACGCCTC GTCTTCAGAG AACGACACTC TGACGTCCAC CAACACCTAC 
AACAGCCGCT ACTGGCACAA CCCCAAACCC AACTACGACA CCAACTCCTA CACACGCTAC 
AACGGCGACA CACGGCAGAC CTTCAGCGCC AGCGCCCCTG CAAGGCCAGC GTACACTAAC 
GGCAGCCACA CGCTGCCCCC GCCCAAAACT CTGGTGGTCA CCACGAACTC CGCGCCCTCA 
CCACCCGTCA TCGCCCGCAG CAATGGATCA CTAAGCTTGC GAACGCCCGC CGCTAGCACT 
ACGCCGGCGC CGGCGGCACA CGGACAGCAG CACACACACT CATACGCAGT CAGTCAAGCT 
ACGCTAGAGC GCATGGGTGC TGTACCCGTC ATGGTGCCCG CGCAGAGCAG AGCCGGCTCG 
CTCGTCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001265751.1
CDS	1..1329
Translation	MLKFHNSDLWIAWLVFFCVNVCVYALEVTVSQSSVQVARGQAAVLPCTFSTSAALNNLYIIWMVTPLANANQPEQVIIYQSGQVFSLANHMNGRVGFVSTMPSTSASIFINNTQLSDTGTYQCLVNNLPDRGGRNIGVIGLTVLVPPSIPSCRVQGSLDVGSDVMLLCGSDEGIPTPTYAWEKQESVPKLPHNAMQDQMQGTVTLRNISSSTSGLYQCTASNAIGRSTCVLNLQVTAPQPQSVGLIAGTIATGVLALIICSSLVLVSLFYWRNKNKYEEEEIPNEIREDDLPPKRSSSVKAFQADASSSENDTLTSTNTYNSRYWHNPKPNYDTNSYTRYNGDTRQTFSASAPARPAYTNGSHTLPPPKTLVVTTNSAPSPPVIARSNGSLSLRTPAASTTPAPAAHGQQHTHSYAVSQATLERMGAVPVMVPAQSRAGSLV

Target ORF information:

RefSeq Version	NM_001278822.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio immunoglobulin superfamily member 11 (igsf11), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001278822.1

ORF Insert Sequence:

ATGCTGAAAT TTCATAATTC GGACCTATGG ATTGCTTGGC TGGTCTTCTT TTGTGTGAAC 
GTGTGTGTGT ATGCGCTAGA AGTGACGGTC AGTCAGAGCA GTGTCCAGGT GGCCAGAGGT 
CAGGCGGCCG TCTTGCCCTG TACTTTCAGC ACCAGCGCCG CTCTCAATAA TCTCTACATC 
ATATGGATGG TCACACCGCT AGCCAACGCC AACCAGCCGG AGCAGGTGAT CATCTACCAG 
AGTGGTCAGG TATTCAGTTT AGCCAATCAC ATGAATGGGC GTGTGGGTTT CGTGTCCACC 
ATGCCCAGCA CAAGTGCCTC CATCTTCATC AATAACACTC AGCTGTCGGA CACCGGGACG 
TACCAGTGCC TGGTCAACAA CCTGCCGGAC CGCGGAGGAC GCAATATAGG AGTGATCGGC 
CTGACGGTGC TCGTTCCTCC ATCCATCCCG TCGTGTCGTG TCCAGGGCTC TCTGGACGTG 
GGCAGTGATG TGATGCTGTT GTGCGGTTCG GATGAAGGAA TCCCGACGCC CACCTACGCC 
TGGGAGAAGC AGGAGTCGGT GCCCAAACTG CCCCACAATG CCATGCAAGA TCAGATGCAG 
GGAACGGTGA CGCTCAGAAA CATCAGCAGC AGCACATCTG GACTCTACCA GTGCACAGCA 
TCAAACGCCA TCGGGAGAAG CACCTGCGTC CTCAACCTGC AGGTCACCGC ACCTCAGCCT 
CAGAGTGTGG GTCTGATCGC GGGCACCATC GCCACTGGTG TTCTGGCTCT GATCATCTGC 
AGTTCGCTGG TGTTGGTCTC GCTCTTCTAC TGGAGGAACA AGAACAAATA TGAGGAGGAG 
GAGATTCCCA ATGAGATCAG GGAAGACGAT CTCCCTCCGA AGCGATCCTC ATCGGTGAAA 
GCGTTTCAGG CGGACGCCTC GTCTTCAGAG AACGACACTC TGACGTCCAC CAACACCTAC 
AACAGCCGCT ACTGGCACAA CCCCAAACCC AACTACGACA CCAACTCCTA CACACGCTAC 
AACGGCGACA CACGGCAGAC CTTCAGCGCC AGCGCCCCTG CAAGGCCAGC GTACACTAAC 
GGCAGCCACA CGCTGCCCCC GCCCAAAACT CTGGTGGTCA CCACGAACTC CGCGCCCTCA 
CCACCCGTCA TCGCCCGCAG CAATGGATCA CTAAGCTTGC GAACGCCCGC CGCTAGCACT 
ACGCCGGCGC CGGCGGCACA CGGACAGCAG CACACACACT CATACGCAGT CAGTCAAGCT 
ACGCTAGAGC GCATGGGTGC TGTACCCGTC ATGGTGCCCG CGCAGAGCAG AGCCGGCTCG 
CTCGTCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

Molecular Physiology of an Extra-renal Cl(-) Uptake Mechanism for Body Fluid Cl(-) Homeostasis.
International journal of biological sciences11(10)1190-203(2015)
Wang YF,Yan JJ,Tseng YC,Chen RD,Hwang PP

B cells in teleost fish act as pivotal initiating APCs in priming adaptive immunity: an evolutionary perspective on the origin of the B-1 cell subset and B7 molecules.
Journal of immunology (Baltimore, Md. : 1950)192(6)2699-714(2014 Mar)
Zhu LY,Lin AF,Shao T,Nie L,Dong WR,Xiang LX,Shao JZ

Melanophore migration and survival during zebrafish adult pigment stripe development require the immunoglobulin superfamily adhesion molecule Igsf11.
PLoS genetics8(8)e1002899(2012)
Eom DS,Inoue S,Patterson LB,Gordon TN,Slingwine R,Kondo S,Watanabe M,Parichy DM