| Gene Symbol | HPL |
| Entrez Gene ID | 101211324 |
| Full Name | allene oxide synthase, chloroplastic-like |
| Synonyms | HPL1 |
| Gene Type | protein-coding |
| Organism | Cucumis sativus(cucumber) |
ORF » Species Summary » Cucumis sativus » HPL cDNA ORF clone
| Gene Symbol | HPL |
| Entrez Gene ID | 101211324 |
| Full Name | allene oxide synthase, chloroplastic-like |
| Synonyms | HPL1 |
| Gene Type | protein-coding |
| Organism | Cucumis sativus(cucumber) |
| mRNA | Protein | Name |
|---|---|---|
| NM_001287470.1 | NP_001274399.1 | allene oxide synthase, chloroplastic-like |
| XM_031888324.1 | XP_031744184.1 | allene oxide synthase, chloroplastic-like isoform X1 |
| XM_011660234.1 | XP_011658536.1 | allene oxide synthase, chloroplastic-like isoform X1 |
| XM_011660234.2 | XP_011658536.1 | allene oxide synthase, chloroplastic-like isoform X1 |
Fatty acid 9- and 13-hydroperoxide lyases from cucumber.
Matsui K, Ujita C, Fujimoto S, Wilkinson J, Hiatt B, Knauf V, Kajiwara T, Feussner I
FEBS letters481(2)183-8(2000 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following HPL gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HPL cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OCu36539 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001287470.1 , XM_031888324.1 , XM_011660234.1 , XM_011660234.2 | |
| Accession Version | NM_001287470.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1437bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-12-21 | |
| Organism | Cucumis sativus(cucumber) | |
| Product | allene oxide synthase, chloroplastic-like | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from KF444440.1. ##Evidence-Data-START## Transcript exon combination :: CK755571.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00007319, SAMN01085195 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGGCTTCTT CCTCCCCTGA ACTTCCTCTC AAACCCATTC CCGGTGGCTA TGGCTTCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001274399.1 |
| CDS | 1..1437 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001287470.1 |
1 | ATGGCTTCTT CCTCCCCTGA ACTTCCTCTC AAACCCATTC CCGGTGGCTA TGGCTTCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCu36539 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001287470.1 , XM_031888324.1 , XM_011660234.1 , XM_011660234.2 | |
| Accession Version | XM_031888324.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1437bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-12-16 | |
| Organism | Cucumis sativus(cucumber) | |
| Product | allene oxide synthase, chloroplastic-like isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_026661.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Cucumis sativus Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCTTCTT CCTCCCCTGA ACTTCCTCTC AAACCCATTC CCGGTGGCTA TGGCTTCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_031744184.1 |
| CDS | 111..1547 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_031888324.1 |
1 | ATGGCTTCTT CCTCCCCTGA ACTTCCTCTC AAACCCATTC CCGGTGGCTA TGGCTTCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCu36539 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001287470.1 , XM_031888324.1 , XM_011660234.1 , XM_011660234.2 | |
| Accession Version | XM_011660234.1 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1437bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2015-03-22 | |
| Organism | Cucumis sativus(cucumber) | |
| Product | allene oxide synthase, chloroplastic-like isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_011953809.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Cucumis sativus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCTTCTT CCTCCCCTGA ACTTCCTCTC AAACCCATTC CCGGTGGCTA TGGCTTCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_011658536.1 |
| CDS | 63..1499 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_011660234.1 |
1 | ATGGCTTCTT CCTCCCCTGA ACTTCCTCTC AAACCCATTC CCGGTGGCTA TGGCTTCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCu36539 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001287470.1 , XM_031888324.1 , XM_011660234.1 , XM_011660234.2 | |
| Accession Version | XM_011660234.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1437bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-12-16 | |
| Organism | Cucumis sativus(cucumber) | |
| Product | allene oxide synthase, chloroplastic-like isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_026661.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 17, 2019 this sequence version replaced XM_011660234.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Cucumis sativus Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCTTCTT CCTCCCCTGA ACTTCCTCTC AAACCCATTC CCGGTGGCTA TGGCTTCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_011658536.1 |
| CDS | 100..1536 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_011660234.2 |
1 | ATGGCTTCTT CCTCCCCTGA ACTTCCTCTC AAACCCATTC CCGGTGGCTA TGGCTTCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Fatty acid 9- and 13-hydroperoxide lyases from cucumber. |