UPF2 cDNA ORF clone, Cuculus canorus(common cuckoo)

Gene
Clones
gRNAs

Summary

Gene Symbol	UPF2
Entrez Gene ID	104066295
Full Name	UPF2, regulator of nonsense mediated mRNA decay
Gene Type	protein-coding
Organism	Cuculus canorus(common cuckoo)

mRNA and Protein(s)

mRNA	Protein	Name
XM_009568882.1	XP_009567177.1	regulator of nonsense transcripts 2

Pathways from BioSystems
Gene Ontology

The following UPF2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the UPF2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCu38153	XM_009568882.1 Latest version!	Cuculus canorus UPF2 regulator of nonsense transcripts homolog (yeast) (UPF2), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$713.30 $1019.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

UPF2 ( XM_009568882.1 ) cDNA ORF clone, Cuculus canorus(common cuckoo) -> XP_009567177.1 Cuculus canorus UPF2 regulator of nonsense transcripts homolog (yeast) (UPF2), mRNA.

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CloneID	OCu38153
Clone ID Related Accession (Same CDS sequence)	XM_009568882.1
Accession Version	XM_009568882.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3816bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2014-10-13
Organism	Cuculus canorus(common cuckoo)
Product	regulator of nonsense transcripts 2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_009243668.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Cuculus canorus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCAGCTG AGCGCAAAAA GCCAGCAAAC ATGGAAGAAA AAGAATCTCC GCTAAATAAT 
AAAGACAGAG AATTTAGTGA AAGGCGACCA GTGAGCACTA GGGAGAAACC AAAAGAAGAT 
GCCAAGGTTG GTGTGAAGAG AGAGACTTTA AAGGTTCCTG AAGACAAAAA GAAAAAACTG 
GATGAGGATA AAAAGAAAAA AGAAGATAAG GAGCGGAAGA AAAAAGAGGA GGATAAAGTA 
AAGGCAGAAG AAGAGCAAAA GAAGAAAGAA GAAGAAGAAA AGAAGAAACT TGAAGAAGAA 
GAGAAAAAGA AACAAGAGGA GGAAGAGAAA AAGAAACAAG AAGAAGCAGC TGCTCAACTG 
AAAGAAAAAG AGGAAGCACA TCAGCTCCAT CAGGAGGCTT GGGAGCGTCA TCAGGCAAGA 
AAAGAGCTTC GCAGCAAAAA CCAGAATGCA CCAGACAATC GTCCTGAGGA AAACTTCTTC 
AGCAGACTAG ATTCCAGTCT CAAGAAGAAC ACAGCTTTTG TTAAGAAGCT AAAAACCATT 
ACAGAGCAAC AAAGGGACTC CTTGTCCCAT GACTTTAATA GCCTGAATTT AAGCAAGTAC 
ATTGCAGAAG CAGTAGCTTC TATTGTGGAA GCCAAACTGA AAATCTCAGA TGTAAACTGC 
GCTGTGCACT TGTGTTCCCT CTTTCACCAG CGCTATGCTG ATTTTGCTCC TTCATTACTT 
CAGGCTTGGA AAAAACATTT TGAAGCAAGG AAAGAAGAAA AGACTCCCAA CATTACCAAG 
TTAAGGACTG ATTTGCGTTT CATTGCAGAA TTGACAATAG TTGGGATTTT CACTGACAAG 
GAAGGTCTGT CTTTAATCTA TGAGCAGCTT AAAAATATTA TTAACGCTGA TCGAGAATCC 
CACACTCATG TTTCTGTGGT TATCAGCTTT TGTCGGCACT GTGGAGATGA CATTGCTGGT 
TTGGTACCGA GGAAAGTAAA AACTGTTGCA GAGAAGTTTA ACTTGAGCTT TCCTCCTAGT 
GAGATAATTA GCCCAGAGAA ACAACAGCCA TTCCAGAATT TGTTGAAGGA ATACTTTACG 
TCTTTGACCA AACACCTGAA AAGGGACCAC AGGGAGCTAC AAAATATTGA AAGACAAAAC 
AGGCGCATTC TACACTCCAA AGGAGAGCTG AGTGAAGATA GGCACAAGCA ATATGAGGAA 
TTTGCGATGT CATATCAGAA GCTGTTGGCA AATTCTCAAT CTCTGGCTGA TCTTTTGGAT 
GAAAATATGC CTGACCTTCC CCAAGAGAAA CCAACACCTG AGGAACATGG ACCTGGTATC 
GATATTTTCA CACCAGGAAA GCCAGGAGAA TATGACCTGG AGGGGGGTAT CTGGGAAGAT 
GAAGATGCTA GAAACTTCTA TGAGAATCTC ATCGACTTAA AGGCTTTTGT GCCAGCAATT 
TTGTTTAAGG ATAATGAAAA ATGTTCTCAG AACAAGGATT CCGGCAAAGA TGAATCAAGA 
GATTCAAAAG ATGCTAAAGA TAATAAGGAA GCACCTGGGA GTGAGGATTT GGAGTTGGAG 
CTGGAGAACC TGGATATTAA TGATGATCCT CTGGAGCTGG ACTGTGGAGA TGAGGCAGAA 
GATCTTACAA AAAAGCTGCT CGATGAGCAA GAACAAGAGG ATGAAGAAGC GAGTACTGGA 
TCTCATTTAA AACTTATAGT AGATGCTTTT CTTCAGCAGC TTCCAAATTG TGTCAACAGA 
GACCTCATAG ACAAGGCGGC AATGGATTTT TGCATGAATA TGAATACAAA AGCCAACAGA 
AGAAAACTAG TACGAGCACT TTTCATAGTT CCTAGGCAAA GGTTGGATTT GCTACCATTT 
TATGCAAGAC TGGTTGCCAC ACTGCATCCC TGTATGTCTG ATGTAGCAGA GGATCTTTGT 
TCCATGCTGA AAGGGGATTT CAGGTTTCAC GTAAGAAAAA AGGACCAGAT CAACATTGAG 
ACAAAGAATA AAACCGTGAG ATTTATTGGT GAGCTTACAA AGTTTAAGAT GTTCTCCAAG 
AACGATACTC TCCACTGTTT GAAGATGCTT CTGTCAGACT TTTCTCATCA CCATATTGAA 
ATGGCATGTA CTCTGCTGGA AACCTGTGGA AGATTCCTCT TCAGATCGCC AGAATCTCAC 
TTAAGAACCA GTGTTCTTCT GGAACAAATG ATGAGAAAAA AACAAGCAAT GCATCTTGAT 
GCGCGCTATG TTACAATGGT AGAAAATGCC TATTACTACT GTAATCCCCC TCCAGCTGAA 
AAAACTGTGA AGAAAAAACG TCCTCCTTTG CAGGAATATA TTCGTAAGCT TCTTTACAAG 
GATCTCTCCA AGGTCACCAC AGAGAAGGTC CTGAGACAGA TGCGCAAGCT GCCTTGGCAG 
GATGCGGAAG TAAAAGACTA TGTAATATGC TGTATGATCA ACATCTGGAA TGTGAAATAC 
AATAGCATTC ACTGTGTAGC CAACCTCTTG GCGGGGTTAG TTCTTTACCA AGAGGATGTT 
GGAATTCATG TTGTGGATGG AGTGCTAGAG GATATTCGAC TAGGAATGGA GGTTAACCAG 
CCAAAGTTTA ACCAACGGCG AATCAGCAGT GCTAAGTTTT TGGGGGAGCT CTACAATTAT 
CGAATGGTGG AATCAGCTGT AATATTTCGA ACTCTGTATT CTTTCACATC ATTTGGTGTG 
AACCCTGATG GTAGCCCTAG TCCACTGGAC CCTCCAGAGC ATCTTTTCAG AATCAGACTA 
GTCTGTACAA TCCTCGACAC CTGTGGGCAG TATTTTGACA GAGGATCCAG CAAACGAAAA 
CTTGATTGCT TCCTTGTATA CTTTCAGCGG TATGTTTGGT GGAAAAAAAG CCTGGACGTT 
TGGACAAAAG ACCACCCATT TCCTATAGAC ATAGACTATA TGATCAGTGA TACACTGGAA 
CTGCTGAGAC CAAAGATAAA GCTTTGCAGT TCTCTGGAAG AAGCTGTCAG ACAGGTGCAA 
GACTTGGAAC GAGAATTCTT AATAAAATTA GGAATTGTGA ATGACAAAGA TTCCAAAGAT 
TCTATTACGG AAGGAGAGAA CCTGGAAGAG GATGAAGAGG AGGAGGAAGG TGGAGCAGAG 
ACAGAGGAAC AGTCTGGAAA TGAAAGTGAA GTAAATGAGC CAGAAGAAGA GGAGGGCTCT 
GACAATGAGG AGGAGGAAGG TGAAGAAGAG GAAGAAGAAA ACACAGATTA CCTTACAGAC 
TCCAATAAGG AAAATGAAAC GGATGAGGAG AATACAGAAG TAATGATTAA AGGAGGAGGA 
CTTAAGCATG TCCCTTGTGC TGAAGATGAG GACTTCATTC AGGCGTTGGA TAAAATGATG 
CTGGAAAATC TTCAGCAACG GAGTGGTGAA TCTGTGAAAG TACATCAGTT GGATGTTGCT 
ATTCCTCTGC ATCTCAAAAG TCAGCTCAAG AAGGGTCCTC CACTTGGAAG TGGGGAAGGA 
GAGTCAGAGT CTGGAGACAC AATGCCGTTT GTCATGTTAA CACGAAAGGG CAACAAACAA 
CAGTTTAAGA TCCTAAACGT TCCAATGTCT TCCCAACTTG CTGCAAACCA TTGGAACCAA 
CAGCAAGCTG AACAGGAGGA GAGAATGAGG ATGAAAAAGC TCACTTTGGA TATCAATGAG 
CGGCAAGAAC AAGAGGACTA CCAGGAAATG TTGCAGTCTC TGGCACAGCG TCCAGCTCCA 
GCAAATACTA ATCGTGAACG ACGGCCTCGT TACCAGCATC CGAAGGGAGC ACCTAATGCA 
GATCTAATCT TTAAAACTGG TGGGAGGAGA CGTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009567177.1
CDS	7..3822
Translation	MPAERKKPANMEEKESPLNNKDREFSERRPVSTREKPKEDAKVGVKRETLKVPEDKKKKLDEDKKKKEDKERKKKEEDKVKAEEEQKKKEEEEKKKLEEEEKKKQEEEEKKKQEEAAAQLKEKEEAHQLHQEAWERHQARKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTITEQQRDSLSHDFNSLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLLQAWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRESHTHVSVVISFCRHCGDDIAGLVPRKVKTVAEKFNLSFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQEKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAILFKDNEKCSQNKDSGKDESRDSKDAKDNKEAPGSEDLELELENLDINDDPLELDCGDEAEDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRRKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLKGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFSKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYIRKLLYKDLSKVTTEKVLRQMRKLPWQDAEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVNPDGSPSPLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLDVWTKDHPFPIDIDYMISDTLELLRPKIKLCSSLEEAVRQVQDLEREFLIKLGIVNDKDSKDSITEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNEEEEGEEEEEENTDYLTDSNKENETDEENTEVMIKGGGLKHVPCAEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAIPLHLKSQLKKGPPLGSGEGESESGDTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNADLIFKTGGRRR

Target ORF information:

RefSeq Version	XM_009568882.1
Organism	Cuculus canorus(common cuckoo)
Definition	Cuculus canorus UPF2 regulator of nonsense transcripts homolog (yeast) (UPF2), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009568882.1

ORF Insert Sequence:

ATGCCAGCTG AGCGCAAAAA GCCAGCAAAC ATGGAAGAAA AAGAATCTCC GCTAAATAAT 
AAAGACAGAG AATTTAGTGA AAGGCGACCA GTGAGCACTA GGGAGAAACC AAAAGAAGAT 
GCCAAGGTTG GTGTGAAGAG AGAGACTTTA AAGGTTCCTG AAGACAAAAA GAAAAAACTG 
GATGAGGATA AAAAGAAAAA AGAAGATAAG GAGCGGAAGA AAAAAGAGGA GGATAAAGTA 
AAGGCAGAAG AAGAGCAAAA GAAGAAAGAA GAAGAAGAAA AGAAGAAACT TGAAGAAGAA 
GAGAAAAAGA AACAAGAGGA GGAAGAGAAA AAGAAACAAG AAGAAGCAGC TGCTCAACTG 
AAAGAAAAAG AGGAAGCACA TCAGCTCCAT CAGGAGGCTT GGGAGCGTCA TCAGGCAAGA 
AAAGAGCTTC GCAGCAAAAA CCAGAATGCA CCAGACAATC GTCCTGAGGA AAACTTCTTC 
AGCAGACTAG ATTCCAGTCT CAAGAAGAAC ACAGCTTTTG TTAAGAAGCT AAAAACCATT 
ACAGAGCAAC AAAGGGACTC CTTGTCCCAT GACTTTAATA GCCTGAATTT AAGCAAGTAC 
ATTGCAGAAG CAGTAGCTTC TATTGTGGAA GCCAAACTGA AAATCTCAGA TGTAAACTGC 
GCTGTGCACT TGTGTTCCCT CTTTCACCAG CGCTATGCTG ATTTTGCTCC TTCATTACTT 
CAGGCTTGGA AAAAACATTT TGAAGCAAGG AAAGAAGAAA AGACTCCCAA CATTACCAAG 
TTAAGGACTG ATTTGCGTTT CATTGCAGAA TTGACAATAG TTGGGATTTT CACTGACAAG 
GAAGGTCTGT CTTTAATCTA TGAGCAGCTT AAAAATATTA TTAACGCTGA TCGAGAATCC 
CACACTCATG TTTCTGTGGT TATCAGCTTT TGTCGGCACT GTGGAGATGA CATTGCTGGT 
TTGGTACCGA GGAAAGTAAA AACTGTTGCA GAGAAGTTTA ACTTGAGCTT TCCTCCTAGT 
GAGATAATTA GCCCAGAGAA ACAACAGCCA TTCCAGAATT TGTTGAAGGA ATACTTTACG 
TCTTTGACCA AACACCTGAA AAGGGACCAC AGGGAGCTAC AAAATATTGA AAGACAAAAC 
AGGCGCATTC TACACTCCAA AGGAGAGCTG AGTGAAGATA GGCACAAGCA ATATGAGGAA 
TTTGCGATGT CATATCAGAA GCTGTTGGCA AATTCTCAAT CTCTGGCTGA TCTTTTGGAT 
GAAAATATGC CTGACCTTCC CCAAGAGAAA CCAACACCTG AGGAACATGG ACCTGGTATC 
GATATTTTCA CACCAGGAAA GCCAGGAGAA TATGACCTGG AGGGGGGTAT CTGGGAAGAT 
GAAGATGCTA GAAACTTCTA TGAGAATCTC ATCGACTTAA AGGCTTTTGT GCCAGCAATT 
TTGTTTAAGG ATAATGAAAA ATGTTCTCAG AACAAGGATT CCGGCAAAGA TGAATCAAGA 
GATTCAAAAG ATGCTAAAGA TAATAAGGAA GCACCTGGGA GTGAGGATTT GGAGTTGGAG 
CTGGAGAACC TGGATATTAA TGATGATCCT CTGGAGCTGG ACTGTGGAGA TGAGGCAGAA 
GATCTTACAA AAAAGCTGCT CGATGAGCAA GAACAAGAGG ATGAAGAAGC GAGTACTGGA 
TCTCATTTAA AACTTATAGT AGATGCTTTT CTTCAGCAGC TTCCAAATTG TGTCAACAGA 
GACCTCATAG ACAAGGCGGC AATGGATTTT TGCATGAATA TGAATACAAA AGCCAACAGA 
AGAAAACTAG TACGAGCACT TTTCATAGTT CCTAGGCAAA GGTTGGATTT GCTACCATTT 
TATGCAAGAC TGGTTGCCAC ACTGCATCCC TGTATGTCTG ATGTAGCAGA GGATCTTTGT 
TCCATGCTGA AAGGGGATTT CAGGTTTCAC GTAAGAAAAA AGGACCAGAT CAACATTGAG 
ACAAAGAATA AAACCGTGAG ATTTATTGGT GAGCTTACAA AGTTTAAGAT GTTCTCCAAG 
AACGATACTC TCCACTGTTT GAAGATGCTT CTGTCAGACT TTTCTCATCA CCATATTGAA 
ATGGCATGTA CTCTGCTGGA AACCTGTGGA AGATTCCTCT TCAGATCGCC AGAATCTCAC 
TTAAGAACCA GTGTTCTTCT GGAACAAATG ATGAGAAAAA AACAAGCAAT GCATCTTGAT 
GCGCGCTATG TTACAATGGT AGAAAATGCC TATTACTACT GTAATCCCCC TCCAGCTGAA 
AAAACTGTGA AGAAAAAACG TCCTCCTTTG CAGGAATATA TTCGTAAGCT TCTTTACAAG 
GATCTCTCCA AGGTCACCAC AGAGAAGGTC CTGAGACAGA TGCGCAAGCT GCCTTGGCAG 
GATGCGGAAG TAAAAGACTA TGTAATATGC TGTATGATCA ACATCTGGAA TGTGAAATAC 
AATAGCATTC ACTGTGTAGC CAACCTCTTG GCGGGGTTAG TTCTTTACCA AGAGGATGTT 
GGAATTCATG TTGTGGATGG AGTGCTAGAG GATATTCGAC TAGGAATGGA GGTTAACCAG 
CCAAAGTTTA ACCAACGGCG AATCAGCAGT GCTAAGTTTT TGGGGGAGCT CTACAATTAT 
CGAATGGTGG AATCAGCTGT AATATTTCGA ACTCTGTATT CTTTCACATC ATTTGGTGTG 
AACCCTGATG GTAGCCCTAG TCCACTGGAC CCTCCAGAGC ATCTTTTCAG AATCAGACTA 
GTCTGTACAA TCCTCGACAC CTGTGGGCAG TATTTTGACA GAGGATCCAG CAAACGAAAA 
CTTGATTGCT TCCTTGTATA CTTTCAGCGG TATGTTTGGT GGAAAAAAAG CCTGGACGTT 
TGGACAAAAG ACCACCCATT TCCTATAGAC ATAGACTATA TGATCAGTGA TACACTGGAA 
CTGCTGAGAC CAAAGATAAA GCTTTGCAGT TCTCTGGAAG AAGCTGTCAG ACAGGTGCAA 
GACTTGGAAC GAGAATTCTT AATAAAATTA GGAATTGTGA ATGACAAAGA TTCCAAAGAT 
TCTATTACGG AAGGAGAGAA CCTGGAAGAG GATGAAGAGG AGGAGGAAGG TGGAGCAGAG 
ACAGAGGAAC AGTCTGGAAA TGAAAGTGAA GTAAATGAGC CAGAAGAAGA GGAGGGCTCT 
GACAATGAGG AGGAGGAAGG TGAAGAAGAG GAAGAAGAAA ACACAGATTA CCTTACAGAC 
TCCAATAAGG AAAATGAAAC GGATGAGGAG AATACAGAAG TAATGATTAA AGGAGGAGGA 
CTTAAGCATG TCCCTTGTGC TGAAGATGAG GACTTCATTC AGGCGTTGGA TAAAATGATG 
CTGGAAAATC TTCAGCAACG GAGTGGTGAA TCTGTGAAAG TACATCAGTT GGATGTTGCT 
ATTCCTCTGC ATCTCAAAAG TCAGCTCAAG AAGGGTCCTC CACTTGGAAG TGGGGAAGGA 
GAGTCAGAGT CTGGAGACAC AATGCCGTTT GTCATGTTAA CACGAAAGGG CAACAAACAA 
CAGTTTAAGA TCCTAAACGT TCCAATGTCT TCCCAACTTG CTGCAAACCA TTGGAACCAA 
CAGCAAGCTG AACAGGAGGA GAGAATGAGG ATGAAAAAGC TCACTTTGGA TATCAATGAG 
CGGCAAGAAC AAGAGGACTA CCAGGAAATG TTGCAGTCTC TGGCACAGCG TCCAGCTCCA 
GCAAATACTA ATCGTGAACG ACGGCCTCGT TACCAGCATC CGAAGGGAGC ACCTAATGCA 
GATCTAATCT TTAAAACTGG TGGGAGGAGA CGTTGA