COL6A1 cDNA ORF clone, Crocodylus porosus(Australian saltwater crocodile)

Gene
Clones
gRNAs

Summary

Gene Symbol	COL6A1
Entrez Gene ID	109322751
Full Name	collagen type VI alpha 1 chain
Gene Type	protein-coding
Organism	Crocodylus porosus(Australian saltwater crocodile)

mRNA and Protein(s)

mRNA	Protein	Name
XM_019553918.1	XP_019409463.1	collagen alpha-1(VI) chain

Pathways from BioSystems
Gene Ontology

The following COL6A1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the COL6A1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCr84169	XM_019553918.1 Latest version!	Crocodylus porosus collagen type VI alpha 1 chain (COL6A1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$629.30 $899.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

COL6A1 ( XM_019553918.1 ) cDNA ORF clone, Crocodylus porosus(Australian saltwater crocodile) -> XP_019409463.1 Crocodylus porosus collagen type VI alpha 1 chain (COL6A1), mRNA.

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CloneID	OCr84169
Clone ID Related Accession (Same CDS sequence)	XM_019553918.1
Accession Version	XM_019553918.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3069bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-12-19
Organism	Crocodylus porosus(Australian saltwater crocodile)
Product	collagen alpha-1(VI) chain
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017728949.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Crocodylus porosus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAGGTTAA GAACGTTTTT GTTCACTTTC CTACTTGAAG TCTGTTTCCT ATGGAAAGGG 
GCACTGGCTC AGCAAACAGA ACTATCCACT ACAGTTGTGA AATTTGAAGA TTGCCCTGTG 
GATCTGTTTT TTGTTCTGGA TACCTCAGAA AGTGTTGCTT TAAGGGTGAA GCCAATTGGA 
GATTTGGTCG ACCAAGTGAA AGACTTTACC AACCGGTTCA TTGATAAGTT AACAGACAGG 
TATTACCGAT GTGACCGGAA CCTGGTGTGG AATGCTGGAG CTCTGCATTA CAGTGACGAA 
GTGCAGCTAA TAAAGGGGCT CACCCGTATG CCCAATGACA AGGATGACCT GAAGAGGAGA 
GTGTCTGAAG TGAAGTATAT TGGGAAGGGT ACCTACACAG ACTGTGCCAT CAAAAGAGGG 
ATTGAGGAGG TGCTGATCAG TGGTTCTAAT CACAAGGAGA ATAAATACCT GATTGTGGTG 
ACGGATGGTC ATCCCCTGGA GGGGTACAAG GAGCCTTGTG GAGGACTAGA GGATGCTGCT 
AATGAAGCCA AACATCTGGG GATTAAAGTG TTCTCTGTGG CCATTTCGCC TGACCATCTG 
GAGCCAAGGC TGAGTGTAAT TGCTACAGAC AACAACTATC GTCGCAATTT TACAGCAACG 
AGCCTTATAC AGGCCCCGGC TGACACTGAA AACACAATTG ACACCATCAT TGATATGATT 
AAAAATAATG TGGAACAAGT GTGCTGCTCC TATGAGTGCC AGCCTGCTAG AGGGCCTCCA 
GGGCCACCTG GGGACCCAGG ATATGAGGGG GAGAGAGGAA AGCCAGGTCT TCCTGGTGAG 
AAAGGAGACC CGGGAGTGCC TGGACCACCA GGAGACCTTG GACCTGTTGG CTACCAGGGG 
ATGAAGGGAG ACAAAGGTAG TCGAGGAGAG AAGGGTTTCA GAGGATCCAA GGGAGGCAAG 
GGAGAGAAGG GCAGGCGTGG TATTGATGGT ATTGATGGCA TGAAGGGTGA AGCTGGATAT 
CCTGGGTTAC CAGGCTGCAA AGGATCTCCA GGATTTGATG GATCACAAGG CCCTCCTGGA 
CCAAAGGGAG ACCCTGGTGC TTATGGCCTC AAAGGATCAA AGGGAGAGCC TGGAGTTAAT 
GGAAAAGCTG GTAGGCCAGG AAATACTGGA AACTCTGGAG AAAAGGGTCC ACCTGGGAGT 
GTTGGTCCCC CTGGAGAGAA AGGGGAGCTG GGGGATGAGG GAGCTCCTGG TCAGGATGGC 
CCTCCTGGAG AAAGGGGCGG TACTGGAGAG AGAGGCCCGC AGGGCACGTC TGGCCCTCGG 
GGGCCAAGAG GAGACAAGGG TGAGCCTGGC CCTCAGGGTG ACCAAGGGCG AGAAGGACCT 
CTTGGACCAT CTGGAGATCC GGGTGAGGCT GGGCCACTTG GACCCAAGGG GTACCGAGGA 
GAGGAAGGAA CTGTTGGACC TGAGGGCCCT AAAGGAGGTC CTGGAGCACC TGGATTGCGT 
GGAGAACCTG GTTTGATAGG TGAAAGGGGA GAAGATGGCA TTCCAGGAAA TGGCACAATT 
GGTTTTCCTG GCTTACCAGG TTATCCAGGG GACAAAGGAA ATCCTGGCAT TAATGGCACA 
AAGGGATATC CAGGTCCTAG AGGTGATGAG GGAGACGCTG GAGAACCTGG GACTGATAAC 
TTAGTGCCTG GTGACAGAGG TCCCAAAGGA GCAAAAGGTC ACAGAGGTCC TGAAGGACCC 
CCAGGACCTC CTGGACCCGG GGGGCCTCCA GGCCCAGATG AATGTGAAAT TTTAGACATC 
ATAATGAAAA TGTGCTCTTG CTGTGAGTGC ACATGCGGCC CTATCGATCT TCTTTTCGTA 
TTGGACAGTT CAGAGAGTAT CGGCCTGCAA AACTTCCAGA TTGCCAAGGA TTTCATCATT 
AAAGTCATTG ACAGGCTGAG TAAAGATGAA CGTGTAAAGT TTGAGGCTGG GGAGTCACAG 
GTGGGCGTTG TGCAGTACAG CCATGACAAC ACCCAGGAGC TGGTGAAAAT GGGTGATGAC 
AACATTGGCA ACATCGGAGC CTTGAAGCAA GCTGTGAAGA ACCTGAGGTG GATAGCTGGT 
GGGACCTACA CCGGAGAAGC CCTGCAGTTC ACCAAGGATA ACCTGTTGTC ACGGTTTACC 
ACAGACAAGA GGGTTGCCAT CGTCATCACA GATGGCCGGT CAGACACCCT GCGCGACCCC 
GCCTCACTCT CCTCACTCTG TGATGTCACC CAGGTGGTTT CTCTTGGGAT TGGCGATATT 
TTCCGCACGG CCCCTAACTC TGAGCAGTTA GGGGTAATTT CTTGTCAAGG CACATCCCAA 
AAACCAGGAC TATCTGTTCA AAGAGACAAC TATGCTGAAC TGTTAGAAGA CAGTTTTCTG 
CAAAACATTA CCGCACATGT CTGTAAAGAA AAGAAATGTC CAGACTACAC CTGCCCAATC 
ACTTTTGCAG GGTCAGCTGA TATCACACTC CTGGTGGATG GCTCCACCAG TGTCGGGAGT 
AGGAACTTTG AGGTCTCCAA GTCGTTTGTG AAGCGGCTGG CAGAGAGGTT CCTGTCGGCA 
AAAAAGGGTT TGGGTGACTC AGTGCGCGTC TCAGTTGTTC AGTACAGTGG TAAAGGACAG 
CAGAAAAATG AGGTGGAGTT CTCACAGAAC TACACAGTGA TTGCCGATGC AGTTGATAAA 
ATGCAGTACA TGAATGACGC CACAGATGTC AATGCAGCCA TCAGGTATGT CACCAATGTG 
TATCGGCAGA CTTCCCCGTC TGGTGTCAAG AAGAGTGTCC TGATCTTCTC AGATGGTAAC 
TCCCAAGGGA TCAAAGAAAC AGACATAGAG AAGGCAGTGC AAGATGCTCT GAATCAAGGC 
CTTGAGATCT ATGTGCTAGC GGTGGGCAAC CAAGTCAATG AGCCAAACAT CCGCGCCCTT 
GTCACTGGGA AGAGCAGAGT TTATGACGTG AGCTATGGGG AGCGCCATCT CTTCAGACTG 
CCTGACTACC ATTCCCTGCT GCGTGGTGTC TTCTACCAAA CAGTCTCCAG GAAGATAGCT 
GTTGACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_019409463.1
CDS	191..3259
Translation	MRLRTFLFTFLLEVCFLWKGALAQQTELSTTVVKFEDCPVDLFFVLDTSESVALRVKPIGDLVDQVKDFTNRFIDKLTDRYYRCDRNLVWNAGALHYSDEVQLIKGLTRMPNDKDDLKRRVSEVKYIGKGTYTDCAIKRGIEEVLISGSNHKENKYLIVVTDGHPLEGYKEPCGGLEDAANEAKHLGIKVFSVAISPDHLEPRLSVIATDNNYRRNFTATSLIQAPADTENTIDTIIDMIKNNVEQVCCSYECQPARGPPGPPGDPGYEGERGKPGLPGEKGDPGVPGPPGDLGPVGYQGMKGDKGSRGEKGFRGSKGGKGEKGRRGIDGIDGMKGEAGYPGLPGCKGSPGFDGSQGPPGPKGDPGAYGLKGSKGEPGVNGKAGRPGNTGNSGEKGPPGSVGPPGEKGELGDEGAPGQDGPPGERGGTGERGPQGTSGPRGPRGDKGEPGPQGDQGREGPLGPSGDPGEAGPLGPKGYRGEEGTVGPEGPKGGPGAPGLRGEPGLIGERGEDGIPGNGTIGFPGLPGYPGDKGNPGINGTKGYPGPRGDEGDAGEPGTDNLVPGDRGPKGAKGHRGPEGPPGPPGPGGPPGPDECEILDIIMKMCSCCECTCGPIDLLFVLDSSESIGLQNFQIAKDFIIKVIDRLSKDERVKFEAGESQVGVVQYSHDNTQELVKMGDDNIGNIGALKQAVKNLRWIAGGTYTGEALQFTKDNLLSRFTTDKRVAIVITDGRSDTLRDPASLSSLCDVTQVVSLGIGDIFRTAPNSEQLGVISCQGTSQKPGLSVQRDNYAELLEDSFLQNITAHVCKEKKCPDYTCPITFAGSADITLLVDGSTSVGSRNFEVSKSFVKRLAERFLSAKKGLGDSVRVSVVQYSGKGQQKNEVEFSQNYTVIADAVDKMQYMNDATDVNAAIRYVTNVYRQTSPSGVKKSVLIFSDGNSQGIKETDIEKAVQDALNQGLEIYVLAVGNQVNEPNIRALVTGKSRVYDVSYGERHLFRLPDYHSLLRGVFYQTVSRKIAVD

Target ORF information:

RefSeq Version	XM_019553918.1
Organism	Crocodylus porosus(Australian saltwater crocodile)
Definition	Crocodylus porosus collagen type VI alpha 1 chain (COL6A1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_019553918.1

ORF Insert Sequence:

ATGAGGTTAA GAACGTTTTT GTTCACTTTC CTACTTGAAG TCTGTTTCCT ATGGAAAGGG 
GCACTGGCTC AGCAAACAGA ACTATCCACT ACAGTTGTGA AATTTGAAGA TTGCCCTGTG 
GATCTGTTTT TTGTTCTGGA TACCTCAGAA AGTGTTGCTT TAAGGGTGAA GCCAATTGGA 
GATTTGGTCG ACCAAGTGAA AGACTTTACC AACCGGTTCA TTGATAAGTT AACAGACAGG 
TATTACCGAT GTGACCGGAA CCTGGTGTGG AATGCTGGAG CTCTGCATTA CAGTGACGAA 
GTGCAGCTAA TAAAGGGGCT CACCCGTATG CCCAATGACA AGGATGACCT GAAGAGGAGA 
GTGTCTGAAG TGAAGTATAT TGGGAAGGGT ACCTACACAG ACTGTGCCAT CAAAAGAGGG 
ATTGAGGAGG TGCTGATCAG TGGTTCTAAT CACAAGGAGA ATAAATACCT GATTGTGGTG 
ACGGATGGTC ATCCCCTGGA GGGGTACAAG GAGCCTTGTG GAGGACTAGA GGATGCTGCT 
AATGAAGCCA AACATCTGGG GATTAAAGTG TTCTCTGTGG CCATTTCGCC TGACCATCTG 
GAGCCAAGGC TGAGTGTAAT TGCTACAGAC AACAACTATC GTCGCAATTT TACAGCAACG 
AGCCTTATAC AGGCCCCGGC TGACACTGAA AACACAATTG ACACCATCAT TGATATGATT 
AAAAATAATG TGGAACAAGT GTGCTGCTCC TATGAGTGCC AGCCTGCTAG AGGGCCTCCA 
GGGCCACCTG GGGACCCAGG ATATGAGGGG GAGAGAGGAA AGCCAGGTCT TCCTGGTGAG 
AAAGGAGACC CGGGAGTGCC TGGACCACCA GGAGACCTTG GACCTGTTGG CTACCAGGGG 
ATGAAGGGAG ACAAAGGTAG TCGAGGAGAG AAGGGTTTCA GAGGATCCAA GGGAGGCAAG 
GGAGAGAAGG GCAGGCGTGG TATTGATGGT ATTGATGGCA TGAAGGGTGA AGCTGGATAT 
CCTGGGTTAC CAGGCTGCAA AGGATCTCCA GGATTTGATG GATCACAAGG CCCTCCTGGA 
CCAAAGGGAG ACCCTGGTGC TTATGGCCTC AAAGGATCAA AGGGAGAGCC TGGAGTTAAT 
GGAAAAGCTG GTAGGCCAGG AAATACTGGA AACTCTGGAG AAAAGGGTCC ACCTGGGAGT 
GTTGGTCCCC CTGGAGAGAA AGGGGAGCTG GGGGATGAGG GAGCTCCTGG TCAGGATGGC 
CCTCCTGGAG AAAGGGGCGG TACTGGAGAG AGAGGCCCGC AGGGCACGTC TGGCCCTCGG 
GGGCCAAGAG GAGACAAGGG TGAGCCTGGC CCTCAGGGTG ACCAAGGGCG AGAAGGACCT 
CTTGGACCAT CTGGAGATCC GGGTGAGGCT GGGCCACTTG GACCCAAGGG GTACCGAGGA 
GAGGAAGGAA CTGTTGGACC TGAGGGCCCT AAAGGAGGTC CTGGAGCACC TGGATTGCGT 
GGAGAACCTG GTTTGATAGG TGAAAGGGGA GAAGATGGCA TTCCAGGAAA TGGCACAATT 
GGTTTTCCTG GCTTACCAGG TTATCCAGGG GACAAAGGAA ATCCTGGCAT TAATGGCACA 
AAGGGATATC CAGGTCCTAG AGGTGATGAG GGAGACGCTG GAGAACCTGG GACTGATAAC 
TTAGTGCCTG GTGACAGAGG TCCCAAAGGA GCAAAAGGTC ACAGAGGTCC TGAAGGACCC 
CCAGGACCTC CTGGACCCGG GGGGCCTCCA GGCCCAGATG AATGTGAAAT TTTAGACATC 
ATAATGAAAA TGTGCTCTTG CTGTGAGTGC ACATGCGGCC CTATCGATCT TCTTTTCGTA 
TTGGACAGTT CAGAGAGTAT CGGCCTGCAA AACTTCCAGA TTGCCAAGGA TTTCATCATT 
AAAGTCATTG ACAGGCTGAG TAAAGATGAA CGTGTAAAGT TTGAGGCTGG GGAGTCACAG 
GTGGGCGTTG TGCAGTACAG CCATGACAAC ACCCAGGAGC TGGTGAAAAT GGGTGATGAC 
AACATTGGCA ACATCGGAGC CTTGAAGCAA GCTGTGAAGA ACCTGAGGTG GATAGCTGGT 
GGGACCTACA CCGGAGAAGC CCTGCAGTTC ACCAAGGATA ACCTGTTGTC ACGGTTTACC 
ACAGACAAGA GGGTTGCCAT CGTCATCACA GATGGCCGGT CAGACACCCT GCGCGACCCC 
GCCTCACTCT CCTCACTCTG TGATGTCACC CAGGTGGTTT CTCTTGGGAT TGGCGATATT 
TTCCGCACGG CCCCTAACTC TGAGCAGTTA GGGGTAATTT CTTGTCAAGG CACATCCCAA 
AAACCAGGAC TATCTGTTCA AAGAGACAAC TATGCTGAAC TGTTAGAAGA CAGTTTTCTG 
CAAAACATTA CCGCACATGT CTGTAAAGAA AAGAAATGTC CAGACTACAC CTGCCCAATC 
ACTTTTGCAG GGTCAGCTGA TATCACACTC CTGGTGGATG GCTCCACCAG TGTCGGGAGT 
AGGAACTTTG AGGTCTCCAA GTCGTTTGTG AAGCGGCTGG CAGAGAGGTT CCTGTCGGCA 
AAAAAGGGTT TGGGTGACTC AGTGCGCGTC TCAGTTGTTC AGTACAGTGG TAAAGGACAG 
CAGAAAAATG AGGTGGAGTT CTCACAGAAC TACACAGTGA TTGCCGATGC AGTTGATAAA 
ATGCAGTACA TGAATGACGC CACAGATGTC AATGCAGCCA TCAGGTATGT CACCAATGTG 
TATCGGCAGA CTTCCCCGTC TGGTGTCAAG AAGAGTGTCC TGATCTTCTC AGATGGTAAC 
TCCCAAGGGA TCAAAGAAAC AGACATAGAG AAGGCAGTGC AAGATGCTCT GAATCAAGGC 
CTTGAGATCT ATGTGCTAGC GGTGGGCAAC CAAGTCAATG AGCCAAACAT CCGCGCCCTT 
GTCACTGGGA AGAGCAGAGT TTATGACGTG AGCTATGGGG AGCGCCATCT CTTCAGACTG 
CCTGACTACC ATTCCCTGCT GCGTGGTGTC TTCTACCAAA CAGTCTCCAG GAAGATAGCT 
GTTGACTGA