COL6A1 cDNA ORF clone, Corvus brachyrhynchos(American crow)

Gene
Clones
gRNAs

Summary

Gene Symbol	COL6A1
Entrez Gene ID	103621856
Full Name	collagen type VI alpha 1 chain
Gene Type	protein-coding
Organism	Corvus brachyrhynchos(American crow)

mRNA and Protein(s)

mRNA	Protein	Name
XM_017743355.1	XP_017598844.1	collagen alpha-1(VI) chain

Pathways from BioSystems
Gene Ontology

The following COL6A1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the COL6A1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCo73595	XM_017743355.1 Latest version!	Corvus brachyrhynchos collagen type VI alpha 1 chain (COL6A1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$510.30 $729.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

COL6A1 ( XM_017743355.1 ) cDNA ORF clone, Corvus brachyrhynchos(American crow) -> XP_017598844.1 Corvus brachyrhynchos collagen type VI alpha 1 chain (COL6A1), mRNA.

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CloneID	OCo73595
Clone ID Related Accession (Same CDS sequence)	XM_017743355.1
Accession Version	XM_017743355.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2973bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-08-02
Organism	Corvus brachyrhynchos(American crow)
Product	collagen alpha-1(VI) chain
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_008240023.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Corvus brachyrhynchos Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END##

ATGAGGCTGC GAGACTTTCT GCTCACTCTG CTGCTCCCGG CCGGCTTCCT GTGGGGGGGC 
TCATGTGCTC AGCGCCCAGA AATCATCACC CAGGTCTCAA GCGCAGAAGA CTGCCCTGTG 
GACCTGTTCT TCGTCCTGGA CACCTCAGAG AGCGTTGCCC TGAGGGTGAA GCCCTTTGGG 
GACCTGGTTA CCCAAGTGAA GGATTTCACC AACCGGTTCA TTGATAAGCT GACCCAGAGG 
TACTACCGCT GCGACCGCAA CCTGGTGTGG AACGCGGGAG CGCTGCACTA CAGCGATGAG 
GTGGTGCTCA TCAAGGGCCT GACGCCGATG CCCAGCGGGC AGAGCGAGCT GAAGAACCGC 
GTGTCATCCA TCAACTACAT CGGGAAGGGC ACCTACACCG ACTGCGCCAT AAAGCGCGGC 
ATCGAGGAGC TGCTCATCGG GGGTTCCCAT CACAAGGAGA ATAAATACCT GATCGTGGTG 
ACTGATGGAC ACCCCTTGGA AGGTTACAAG GAGCCCTGTG GGGGCCTGGA TGATGCTGCC 
AACGAAGCCA AACTCTTGGG GATCAAAGTG TTCTCCGTTG CCATCTCCCC CAACCACCTG 
GACCAGCGGC TGAACATCAT CGCCACGGAC CACCCTTCTG TGCAGTGCTG CTCCTTCGAG 
TGCCAGCCTC CCCGAGGGCC CCCTGGACCT GCTGGTGACC CAGGCCATGA GGGAGAACGA 
GGCAAGCCAG GTCTTCCCGG CCAGAAAGGA GAGGCTGGAG ACCCAGGCAG GCCAGGAGAC 
ATGGGACCTG CTGGCTACCA AGGAATGAAG GGTGACAAAG GAAGCCGAGG AGAGAAGGGC 
TCAAGAGGAG CCAAAGGAGC CAAGGGTGAG AAAGGCAGGC GTGGAATCGA TGGCATCGAT 
GGCATGAAGG GTGAAGCTGG ATACCCCGGA TTACCTGGCT GCAAAGGCTC ACCTGGATTC 
GACGGAGCTC AAGGCCCACC CGGACCAAAG GGAGATCCCG GTGCTTTTGG ACCCAAGGGA 
GCAAAGGGGG AGCCTGGGAA TGATGGAAAG CCTGGCCGAC AGGGGATTCC TGGCAACCCT 
GGAGAGAAGG GCGCTCCTGG GAACCAGGGT GAGCCTGGAC CAGCAGGAGA GACTGGTGAC 
GAGGGTGCTC CAGGTGAGGA TGGTCCTCCT GGAGAACGGG GCACCAATGG AGAGAGAGGA 
GCCCCGGGCT CGCCGGGTGA CCGCGGGCCG AGAGGAGAGC TGGGAGAGCC CGGACCACCT 
GGTGACCAAG GGCGGGAAGG ACCCCCTGGA CCACCTGGCG ACCAGGGTGA GCCCGGACCC 
CCAGGACCCA AAGGCTACAG GGGAGATGAC GGCCCCCCCG GCAGTGAGGG CCCAAAGGGA 
TTGCCTGGAG CTCCTGGGCT GCCTGGAGAC CCTGGGCTGA TGGGAGAAAG GGGGGAGGAT 
GGTCCTCCTG GGAACGGCAC AATTGGATTC ACAGGTGCCC CAGGGCAGCC AGGAGACAGA 
GGCAACCCTG GCACTAACGG AACAAAAGGC TATGTCGGAC CTAAAGGTGA TGAAGGAGAA 
GCTGGTGACC CTGGCAATGA TAACCTGACC CCTGGGCCCA GTGGCATCAA AGGAGCAAAG 
GGCCACAGGG GACGTGAAGG TCCCCCGGGA CCACCAGGAC CTGTGGGGCC TCCAGGACCA 
GATGAATGTG AAATCTTGGA CATCATCATG AAGATGTGCT CTTGCTGCGA GTGCACCTGT 
GGTCCCGTCG ACCTCCTGTT TGTGTTGGAC AGCTCGGAGA GCATTGGCCT GCAGAACTTC 
CAGATTGCCA AGGACTTCAT CATCAAAGTC ATCGACCGCC TGAGCAAGGA CGAGCGGGTC 
AAGTTTGAAC CTGGAGAGTC CCGTGTGGGT GTTGTGCAGT ACAGCCATGA CAACACACAG 
GAGCTGGTGG CCATGGGGGA TGCCAACATC GACAACATTG GGGCACTCAA GCAGGCAGTC 
AAGAACCTGC AGTGGATCGC TGGGGGCACC TACACTGGGG AGGCCCTGCA GTTCACCAAG 
GACAACCTGC TGCGGAGGTT CACGTCCGAC AAGCGCGTGG CCATCGTCAT CACGGACGGG 
CGCTCCGACA CCCTGCGGGA CCCCACCCCA CTCAACTCCC TGTGCGATGT CACCCCGGTG 
GTTTCCCTTG GAATAGGTGA CATTTTCCGG AACCCACCAA ATCCAGATCA CCTGAATGAC 
ATCGCTTGTT TAAGCAGACC GACCAGGCCG GGACTGTCCA TTCAAAGGGA CAATTATGCC 
GAGCTCCTGG ATGACACCTT CTTGCAGAAC ATCACCTCAT ATGTCTGCCA AGAGAAGAAA 
TGTCCTGACT ATACCTGCCC AATCACCTTC ACCGAGCCAG CAGACATCAC GCTGCTGGTG 
GACAGCTCCA CCAGTGTGGG GAGCAAGAAC TTTGAGACCA CCAAGAAGTT TGTGAAGCGG 
CTGGCAGGGC GGTTCCTGGA GGCCGGCAAG CCCGCCGACG ACTCCGTGCG CATCTCGGTG 
GTGCAGTACA GCAGCCGGAA CCAGCAGAAA GTGGAAGCTC AGTTCCTGTA CAACTACACG 
GTCATTGCCA AGGCCATTGA CAACATGGAG TTTATGAATG ACGCCACGGA CGTGAACTCT 
GCTCTGCAGT TCATCACAGA GCTGTACCGG CGCTCCGCCC GCGCCGTGGC CAAGAAGAGG 
GTGCTGGTGT TTTCTGACGG ACACTCCCAA GGGATCACTG CCAGGGCCAT CGAGAGGGCT 
GTGCAGGACG CACAGAAGGC TAACATCGAG ATCTACGTGC TGGCAGTGGG CAGCCAAGCC 
AACGAGCCAA ACATCCGTGT CCTGGTCACG GGAAAGAGCG CGGATTACGA CGTGGCCTAT 
GGGGAGCGGC ACCTTTTCCG CGTGCCCGAC TACACCTCTC TGCTGCGTGG TGTCTTCTAC 
CAAACTGTGT CCAGGAAGAT AGCTGTTGAC TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017598844.1
CDS	207..3179
Translation	MRLRDFLLTLLLPAGFLWGGSCAQRPEIITQVSSAEDCPVDLFFVLDTSESVALRVKPFGDLVTQVKDFTNRFIDKLTQRYYRCDRNLVWNAGALHYSDEVVLIKGLTPMPSGQSELKNRVSSINYIGKGTYTDCAIKRGIEELLIGGSHHKENKYLIVVTDGHPLEGYKEPCGGLDDAANEAKLLGIKVFSVAISPNHLDQRLNIIATDHPSVQCCSFECQPPRGPPGPAGDPGHEGERGKPGLPGQKGEAGDPGRPGDMGPAGYQGMKGDKGSRGEKGSRGAKGAKGEKGRRGIDGIDGMKGEAGYPGLPGCKGSPGFDGAQGPPGPKGDPGAFGPKGAKGEPGNDGKPGRQGIPGNPGEKGAPGNQGEPGPAGETGDEGAPGEDGPPGERGTNGERGAPGSPGDRGPRGELGEPGPPGDQGREGPPGPPGDQGEPGPPGPKGYRGDDGPPGSEGPKGLPGAPGLPGDPGLMGERGEDGPPGNGTIGFTGAPGQPGDRGNPGTNGTKGYVGPKGDEGEAGDPGNDNLTPGPSGIKGAKGHRGREGPPGPPGPVGPPGPDECEILDIIMKMCSCCECTCGPVDLLFVLDSSESIGLQNFQIAKDFIIKVIDRLSKDERVKFEPGESRVGVVQYSHDNTQELVAMGDANIDNIGALKQAVKNLQWIAGGTYTGEALQFTKDNLLRRFTSDKRVAIVITDGRSDTLRDPTPLNSLCDVTPVVSLGIGDIFRNPPNPDHLNDIACLSRPTRPGLSIQRDNYAELLDDTFLQNITSYVCQEKKCPDYTCPITFTEPADITLLVDSSTSVGSKNFETTKKFVKRLAGRFLEAGKPADDSVRISVVQYSSRNQQKVEAQFLYNYTVIAKAIDNMEFMNDATDVNSALQFITELYRRSARAVAKKRVLVFSDGHSQGITARAIERAVQDAQKANIEIYVLAVGSQANEPNIRVLVTGKSADYDVAYGERHLFRVPDYTSLLRGVFYQTVSRKIAVD

Target ORF information:

RefSeq Version	XM_017743355.1
Organism	Corvus brachyrhynchos(American crow)
Definition	Corvus brachyrhynchos collagen type VI alpha 1 chain (COL6A1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017743355.1

ORF Insert Sequence:

ATGAGGCTGC GAGACTTTCT GCTCACTCTG CTGCTCCCGG CCGGCTTCCT GTGGGGGGGC 
TCATGTGCTC AGCGCCCAGA AATCATCACC CAGGTCTCAA GCGCAGAAGA CTGCCCTGTG 
GACCTGTTCT TCGTCCTGGA CACCTCAGAG AGCGTTGCCC TGAGGGTGAA GCCCTTTGGG 
GACCTGGTTA CCCAAGTGAA GGATTTCACC AACCGGTTCA TTGATAAGCT GACCCAGAGG 
TACTACCGCT GCGACCGCAA CCTGGTGTGG AACGCGGGAG CGCTGCACTA CAGCGATGAG 
GTGGTGCTCA TCAAGGGCCT GACGCCGATG CCCAGCGGGC AGAGCGAGCT GAAGAACCGC 
GTGTCATCCA TCAACTACAT CGGGAAGGGC ACCTACACCG ACTGCGCCAT AAAGCGCGGC 
ATCGAGGAGC TGCTCATCGG GGGTTCCCAT CACAAGGAGA ATAAATACCT GATCGTGGTG 
ACTGATGGAC ACCCCTTGGA AGGTTACAAG GAGCCCTGTG GGGGCCTGGA TGATGCTGCC 
AACGAAGCCA AACTCTTGGG GATCAAAGTG TTCTCCGTTG CCATCTCCCC CAACCACCTG 
GACCAGCGGC TGAACATCAT CGCCACGGAC CACCCTTCTG TGCAGTGCTG CTCCTTCGAG 
TGCCAGCCTC CCCGAGGGCC CCCTGGACCT GCTGGTGACC CAGGCCATGA GGGAGAACGA 
GGCAAGCCAG GTCTTCCCGG CCAGAAAGGA GAGGCTGGAG ACCCAGGCAG GCCAGGAGAC 
ATGGGACCTG CTGGCTACCA AGGAATGAAG GGTGACAAAG GAAGCCGAGG AGAGAAGGGC 
TCAAGAGGAG CCAAAGGAGC CAAGGGTGAG AAAGGCAGGC GTGGAATCGA TGGCATCGAT 
GGCATGAAGG GTGAAGCTGG ATACCCCGGA TTACCTGGCT GCAAAGGCTC ACCTGGATTC 
GACGGAGCTC AAGGCCCACC CGGACCAAAG GGAGATCCCG GTGCTTTTGG ACCCAAGGGA 
GCAAAGGGGG AGCCTGGGAA TGATGGAAAG CCTGGCCGAC AGGGGATTCC TGGCAACCCT 
GGAGAGAAGG GCGCTCCTGG GAACCAGGGT GAGCCTGGAC CAGCAGGAGA GACTGGTGAC 
GAGGGTGCTC CAGGTGAGGA TGGTCCTCCT GGAGAACGGG GCACCAATGG AGAGAGAGGA 
GCCCCGGGCT CGCCGGGTGA CCGCGGGCCG AGAGGAGAGC TGGGAGAGCC CGGACCACCT 
GGTGACCAAG GGCGGGAAGG ACCCCCTGGA CCACCTGGCG ACCAGGGTGA GCCCGGACCC 
CCAGGACCCA AAGGCTACAG GGGAGATGAC GGCCCCCCCG GCAGTGAGGG CCCAAAGGGA 
TTGCCTGGAG CTCCTGGGCT GCCTGGAGAC CCTGGGCTGA TGGGAGAAAG GGGGGAGGAT 
GGTCCTCCTG GGAACGGCAC AATTGGATTC ACAGGTGCCC CAGGGCAGCC AGGAGACAGA 
GGCAACCCTG GCACTAACGG AACAAAAGGC TATGTCGGAC CTAAAGGTGA TGAAGGAGAA 
GCTGGTGACC CTGGCAATGA TAACCTGACC CCTGGGCCCA GTGGCATCAA AGGAGCAAAG 
GGCCACAGGG GACGTGAAGG TCCCCCGGGA CCACCAGGAC CTGTGGGGCC TCCAGGACCA 
GATGAATGTG AAATCTTGGA CATCATCATG AAGATGTGCT CTTGCTGCGA GTGCACCTGT 
GGTCCCGTCG ACCTCCTGTT TGTGTTGGAC AGCTCGGAGA GCATTGGCCT GCAGAACTTC 
CAGATTGCCA AGGACTTCAT CATCAAAGTC ATCGACCGCC TGAGCAAGGA CGAGCGGGTC 
AAGTTTGAAC CTGGAGAGTC CCGTGTGGGT GTTGTGCAGT ACAGCCATGA CAACACACAG 
GAGCTGGTGG CCATGGGGGA TGCCAACATC GACAACATTG GGGCACTCAA GCAGGCAGTC 
AAGAACCTGC AGTGGATCGC TGGGGGCACC TACACTGGGG AGGCCCTGCA GTTCACCAAG 
GACAACCTGC TGCGGAGGTT CACGTCCGAC AAGCGCGTGG CCATCGTCAT CACGGACGGG 
CGCTCCGACA CCCTGCGGGA CCCCACCCCA CTCAACTCCC TGTGCGATGT CACCCCGGTG 
GTTTCCCTTG GAATAGGTGA CATTTTCCGG AACCCACCAA ATCCAGATCA CCTGAATGAC 
ATCGCTTGTT TAAGCAGACC GACCAGGCCG GGACTGTCCA TTCAAAGGGA CAATTATGCC 
GAGCTCCTGG ATGACACCTT CTTGCAGAAC ATCACCTCAT ATGTCTGCCA AGAGAAGAAA 
TGTCCTGACT ATACCTGCCC AATCACCTTC ACCGAGCCAG CAGACATCAC GCTGCTGGTG 
GACAGCTCCA CCAGTGTGGG GAGCAAGAAC TTTGAGACCA CCAAGAAGTT TGTGAAGCGG 
CTGGCAGGGC GGTTCCTGGA GGCCGGCAAG CCCGCCGACG ACTCCGTGCG CATCTCGGTG 
GTGCAGTACA GCAGCCGGAA CCAGCAGAAA GTGGAAGCTC AGTTCCTGTA CAACTACACG 
GTCATTGCCA AGGCCATTGA CAACATGGAG TTTATGAATG ACGCCACGGA CGTGAACTCT 
GCTCTGCAGT TCATCACAGA GCTGTACCGG CGCTCCGCCC GCGCCGTGGC CAAGAAGAGG 
GTGCTGGTGT TTTCTGACGG ACACTCCCAA GGGATCACTG CCAGGGCCAT CGAGAGGGCT 
GTGCAGGACG CACAGAAGGC TAACATCGAG ATCTACGTGC TGGCAGTGGG CAGCCAAGCC 
AACGAGCCAA ACATCCGTGT CCTGGTCACG GGAAAGAGCG CGGATTACGA CGTGGCCTAT 
GGGGAGCGGC ACCTTTTCCG CGTGCCCGAC TACACCTCTC TGCTGCGTGG TGTCTTCTAC 
CAAACTGTGT CCAGGAAGAT AGCTGTTGAC TGA