LOC105896483 cDNA ORF clone, Clupea harengus(Atlantic herring)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC105896483
Entrez Gene ID	105896483
Full Name	interferon regulatory factor 1
Gene Type	protein-coding
Organism	Clupea harengus(Atlantic herring)

mRNA and Protein(s)

mRNA	Protein	Name
XM_012823245.1	XP_012678699.1	interferon regulatory factor 1
XM_012823245.2	XP_012678699.1	interferon regulatory factor 1

Pathways from BioSystems
Gene Ontology

The following LOC105896483 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC105896483 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCl167451	XM_012823245.2 Latest version!	Clupea harengus interferon regulatory factor 1 (LOC105896483), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00
OCl86138	XM_012823245.1 Latest version!	Clupea harengus interferon regulatory factor 1 (irf1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC105896483 ( XM_012823245.2 ) cDNA ORF clone, Clupea harengus(Atlantic herring) -> XP_012678699.1 Clupea harengus interferon regulatory factor 1 (LOC105896483), mRNA.

Price & Availability↑

CloneID	OCl167451
Clone ID Related Accession (Same CDS sequence)	XM_012823245.2
Accession Version	XM_012823245.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 954bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-11-17
Organism	Clupea harengus(Atlantic herring)
Product	interferon regulatory factor 1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_045159.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Nov 18, 2019 this sequence version replaced XM_012823245.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Clupea harengus Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCTGTAT CCAGAATGCG CATGAGACCC TGGCTTGAGA ACCAGATCGA CTCCAATTCC 
ATCGATGGTT TGATGTGGAT AAATAAGGAT AAGTTGATGT TTTCCATTCC CTGGAAGCAT 
GCTGCTCGTC ATGGTTGGCA GATGGACAAG GATGCCTGCC TTTTCAAGAA GTGGGCCATC 
CACACCGGTA AATTCAGACC TGGTGTGACT AAACCAGACC CTAAGACATG GAAGGCCAAT 
TTCCGCTGTG CCATGAACTC CCTCCCTGAC ATCGAGGAGG TGAAAGACCA AAGCATCAAC 
AAAGGATGTG GCGCTGTGCG AGTCTACCGA ATGCTCCCGG AAGTGTCCAA AAAGAAAGAC 
AAAAGGTCCA AATCAAGAGA CGGGAAGAAA AAGACTAAGG ATACAACAAA AGTCAAGAGA 
GAGGACAGGG ATATGTGTGC GGGACATCCT ACCAGAGACA GAAGTCCTTT CACAAGCATG 
GAGGATGATT CACTGACTCA GGAGAACACA ATAGACAGCA CTGATGATAT AGAACTTCCT 
TCCCGTCCAT GTATGGATGA TGCAGGAGTA CCAGACTTTT CATCATCGGT GGAGATTGGC 
CCTGACAGCA CAAATGACTG GAGTTTATCT TTCCAAGTTT CCCCACAGCA CTCAATAGGT 
TATGACGATG ATGTCATTGG GATCTCCCAA CAACTGGAGC GCGATCCATC GCAGTGGTTT 
CCTAGCGATG TTAATGGGAG GGGTTTCCTG AGCAATGAAG TAGGCACTAC AACAGAGTCT 
CACCAGAGTC CTCAGAGCCA GTGGAGTGAT GCATCAGATG ACAGATCAGT TGAACTCCAG 
CTCGTCACAG AACTAGTGTC TGACTGGTCA CAACAGGCGC TACTGAGCGA AGAGCAGCCC 
AGTTATGGGG AAATGTGGTC ATCGAACATC TTCAACACAC TGACAGTCTG TTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012678699.1
CDS	127..1080
Translation	MPVSRMRMRPWLENQIDSNSIDGLMWINKDKLMFSIPWKHAARHGWQMDKDACLFKKWAIHTGKFRPGVTKPDPKTWKANFRCAMNSLPDIEEVKDQSINKGCGAVRVYRMLPEVSKKKDKRSKSRDGKKKTKDTTKVKREDRDMCAGHPTRDRSPFTSMEDDSLTQENTIDSTDDIELPSRPCMDDAGVPDFSSSVEIGPDSTNDWSLSFQVSPQHSIGYDDDVIGISQQLERDPSQWFPSDVNGRGFLSNEVGTTTESHQSPQSQWSDASDDRSVELQLVTELVSDWSQQALLSEEQPSYGEMWSSNIFNTLTVC

Target ORF information:

RefSeq Version	XM_012823245.2
Organism	Clupea harengus(Atlantic herring)
Definition	Clupea harengus interferon regulatory factor 1 (LOC105896483), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012823245.2

ORF Insert Sequence:

ATGCCTGTAT CCAGAATGCG CATGAGACCC TGGCTTGAGA ACCAGATCGA CTCCAATTCC 
ATCGATGGTT TGATGTGGAT AAATAAGGAT AAGTTGATGT TTTCCATTCC CTGGAAGCAT 
GCTGCTCGTC ATGGTTGGCA GATGGACAAG GATGCCTGCC TTTTCAAGAA GTGGGCCATC 
CACACCGGTA AATTCAGACC TGGTGTGACT AAACCAGACC CTAAGACATG GAAGGCCAAT 
TTCCGCTGTG CCATGAACTC CCTCCCTGAC ATCGAGGAGG TGAAAGACCA AAGCATCAAC 
AAAGGATGTG GCGCTGTGCG AGTCTACCGA ATGCTCCCGG AAGTGTCCAA AAAGAAAGAC 
AAAAGGTCCA AATCAAGAGA CGGGAAGAAA AAGACTAAGG ATACAACAAA AGTCAAGAGA 
GAGGACAGGG ATATGTGTGC GGGACATCCT ACCAGAGACA GAAGTCCTTT CACAAGCATG 
GAGGATGATT CACTGACTCA GGAGAACACA ATAGACAGCA CTGATGATAT AGAACTTCCT 
TCCCGTCCAT GTATGGATGA TGCAGGAGTA CCAGACTTTT CATCATCGGT GGAGATTGGC 
CCTGACAGCA CAAATGACTG GAGTTTATCT TTCCAAGTTT CCCCACAGCA CTCAATAGGT 
TATGACGATG ATGTCATTGG GATCTCCCAA CAACTGGAGC GCGATCCATC GCAGTGGTTT 
CCTAGCGATG TTAATGGGAG GGGTTTCCTG AGCAATGAAG TAGGCACTAC AACAGAGTCT 
CACCAGAGTC CTCAGAGCCA GTGGAGTGAT GCATCAGATG ACAGATCAGT TGAACTCCAG 
CTCGTCACAG AACTAGTGTC TGACTGGTCA CAACAGGCGC TACTGAGCGA AGAGCAGCCC 
AGTTATGGGG AAATGTGGTC ATCGAACATC TTCAACACAC TGACAGTCTG TTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC105896483 ( XM_012823245.1 ) cDNA ORF clone, Clupea harengus(Atlantic herring) -> XP_012678699.1 Clupea harengus interferon regulatory factor 1 (irf1), mRNA.

Price & Availability↑

CloneID	OCl86138
Clone ID Related Accession (Same CDS sequence)	XM_012823245.1
Accession Version	XM_012823245.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 954bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-06-11
Organism	Clupea harengus(Atlantic herring)
Product	interferon regulatory factor 1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012220519.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Clupea harengus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCTGTAT CCAGAATGCG CATGAGACCC TGGCTTGAGA ACCAGATCGA CTCCAATTCC 
ATCGATGGTT TGATGTGGAT AAATAAGGAT AAGTTGATGT TTTCCATTCC CTGGAAGCAT 
GCTGCTCGTC ATGGTTGGCA GATGGACAAG GATGCCTGCC TTTTCAAGAA GTGGGCCATC 
CACACCGGTA AATTCAGACC TGGTGTGACT AAACCAGACC CTAAGACATG GAAGGCCAAT 
TTCCGCTGTG CCATGAACTC CCTCCCTGAC ATCGAGGAGG TGAAAGACCA AAGCATCAAC 
AAAGGATGTG GCGCTGTGCG AGTCTACCGA ATGCTCCCGG AAGTGTCCAA AAAGAAAGAC 
AAAAGGTCCA AATCAAGAGA TGGGAAGAAA AAGACTAAGG ATACAACAAA AGTCAAGAGA 
GAGGACAGGG ATATGTGTGC GGGACATCCT ACCAGAGACA GAAGTCCTTT CACAAGCATG 
GAGGATGATT CACTGACTCA GGAGAACACA ATAGACAGCA CTGATGATAT AGAACTTCCT 
TCCCGTCCAT GTATGGATGA TGCAGGAGTA CCAGACTTTT CATCATCGGT GGAGATTGGC 
CCTGACAGCA CAAATGACTG GAGTTTATCT TTCCAAGTTT CCCCACAGCA CTCAATAGGT 
TATGACGATG ATGTCATTGG GATCTCCCAA CAACTGGAGC GCGATCCATC GCAGTGGTTT 
CCTAGCGATG TTAATGGGAG GGGTTTCCTG AGCAATGAAG TAGGCACTAC AACAGAGTCT 
CACCAGAGTC CTCAGAGCCA GTGGAGTGAT GCATCAGATG ACAGATCAGT TGAACTCCAG 
CTCGTCACAG AACTAGTGTC TGACTGGTCA CAACAGGCGC TACTGAGCGA AGAGCAGCCC 
AGTTATGGGG AAATGTGGTC ATCGAACATC TTCAACACAC TGACAGTCTG TTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012678699.1
CDS	158..1111
Translation	MPVSRMRMRPWLENQIDSNSIDGLMWINKDKLMFSIPWKHAARHGWQMDKDACLFKKWAIHTGKFRPGVTKPDPKTWKANFRCAMNSLPDIEEVKDQSINKGCGAVRVYRMLPEVSKKKDKRSKSRDGKKKTKDTTKVKREDRDMCAGHPTRDRSPFTSMEDDSLTQENTIDSTDDIELPSRPCMDDAGVPDFSSSVEIGPDSTNDWSLSFQVSPQHSIGYDDDVIGISQQLERDPSQWFPSDVNGRGFLSNEVGTTTESHQSPQSQWSDASDDRSVELQLVTELVSDWSQQALLSEEQPSYGEMWSSNIFNTLTVC

Target ORF information:

RefSeq Version	XM_012823245.1
Organism	Clupea harengus(Atlantic herring)
Definition	Clupea harengus interferon regulatory factor 1 (irf1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012823245.1

ORF Insert Sequence:

ATGCCTGTAT CCAGAATGCG CATGAGACCC TGGCTTGAGA ACCAGATCGA CTCCAATTCC 
ATCGATGGTT TGATGTGGAT AAATAAGGAT AAGTTGATGT TTTCCATTCC CTGGAAGCAT 
GCTGCTCGTC ATGGTTGGCA GATGGACAAG GATGCCTGCC TTTTCAAGAA GTGGGCCATC 
CACACCGGTA AATTCAGACC TGGTGTGACT AAACCAGACC CTAAGACATG GAAGGCCAAT 
TTCCGCTGTG CCATGAACTC CCTCCCTGAC ATCGAGGAGG TGAAAGACCA AAGCATCAAC 
AAAGGATGTG GCGCTGTGCG AGTCTACCGA ATGCTCCCGG AAGTGTCCAA AAAGAAAGAC 
AAAAGGTCCA AATCAAGAGA TGGGAAGAAA AAGACTAAGG ATACAACAAA AGTCAAGAGA 
GAGGACAGGG ATATGTGTGC GGGACATCCT ACCAGAGACA GAAGTCCTTT CACAAGCATG 
GAGGATGATT CACTGACTCA GGAGAACACA ATAGACAGCA CTGATGATAT AGAACTTCCT 
TCCCGTCCAT GTATGGATGA TGCAGGAGTA CCAGACTTTT CATCATCGGT GGAGATTGGC 
CCTGACAGCA CAAATGACTG GAGTTTATCT TTCCAAGTTT CCCCACAGCA CTCAATAGGT 
TATGACGATG ATGTCATTGG GATCTCCCAA CAACTGGAGC GCGATCCATC GCAGTGGTTT 
CCTAGCGATG TTAATGGGAG GGGTTTCCTG AGCAATGAAG TAGGCACTAC AACAGAGTCT 
CACCAGAGTC CTCAGAGCCA GTGGAGTGAT GCATCAGATG ACAGATCAGT TGAACTCCAG 
CTCGTCACAG AACTAGTGTC TGACTGGTCA CAACAGGCGC TACTGAGCGA AGAGCAGCCC 
AGTTATGGGG AAATGTGGTC ATCGAACATC TTCAACACAC TGACAGTCTG TTAG