| Gene Symbol | LOC107875943 |
| Entrez Gene ID | 107875943 |
| Full Name | isochorismate synthase, chloroplastic |
| Synonyms | ICS1 |
| Gene Type | protein-coding |
| Organism | Capsicum annuum |
ORF » Species Summary » Capsicum annuum » LOC107875943 cDNA ORF clone
| Gene Symbol | LOC107875943 |
| Entrez Gene ID | 107875943 |
| Full Name | isochorismate synthase, chloroplastic |
| Synonyms | ICS1 |
| Gene Type | protein-coding |
| Organism | Capsicum annuum |
| mRNA | Protein | Name |
|---|---|---|
| XM_016722852.1 | XP_016578338.1 | isochorismate synthase, chloroplastic isoform X2 |
| XM_016722854.1 | XP_016578340.1 | isochorismate synthase, chloroplastic isoform X4 |
| NM_001325078.1 | NP_001312007.1 | isochorismate synthase, chloroplastic |
| XM_016722851.1 | XP_016578337.1 | isochorismate synthase, chloroplastic isoform X1 |
| XM_016722855.1 | XP_016578341.1 | isochorismate synthase, chloroplastic isoform X5 |
The following LOC107875943 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107875943 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OCa106651 | |
| Clone ID Related Accession (Same CDS sequence) | XM_016722854.1 | |
| Accession Version | XM_016722854.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1461bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-05-04 | |
| Organism | Capsicum annuum | |
| Product | isochorismate synthase, chloroplastic isoform X4 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029982.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capsicum annuum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGATGCCA AGGCGATCCA AGAGCTCCTA TTGGAACCAT TGAAACTCGA ACGTTGCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_016578340.1 |
| CDS | 154..1614 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_016722854.1 |
1 | ATGGATGCCA AGGCGATCCA AGAGCTCCTA TTGGAACCAT TGAAACTCGA ACGTTGCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCa106652 | |
| Clone ID Related Accession (Same CDS sequence) | XM_016722855.1 | |
| Accession Version | XM_016722855.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1416bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-05-04 | |
| Organism | Capsicum annuum | |
| Product | isochorismate synthase, chloroplastic isoform X5 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029982.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capsicum annuum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTGTATCA ATGGAACTTC TTCTCATTCT AAATTGGTCA GTGTTGCTGG TGTTGGCTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_016578341.1 |
| CDS | 459..1874 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_016722855.1 |
1 | ATGTGTATCA ATGGAACTTC TTCTCATTCT AAATTGGTCA GTGTTGCTGG TGTTGGCTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCa250298 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001325078.1 | |
| Accession Version | NM_001325078.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1731bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-05-04 | |
| Organism | Capsicum annuum | |
| Product | isochorismate synthase, chloroplastic | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY743431.1. On May 13, 2016 this sequence version replaced XM_016722853.1. ##Evidence-Data-START## Transcript exon combination :: AY743431.1, JW073950.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00013578, SAMD00013579 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGGCTGTAG GTGCAAGACA CTGCACCTTA AGGTTCATGG AACAACTTGA ATCAACATCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001312007.1 |
| CDS | 46..1776 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001325078.1 |
1 | ATGGCTGTAG GTGCAAGACA CTGCACCTTA AGGTTCATGG AACAACTTGA ATCAACATCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCa106649 | |
| Clone ID Related Accession (Same CDS sequence) | XM_016722851.1 | |
| Accession Version | XM_016722851.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1848bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-05-04 | |
| Organism | Capsicum annuum | |
| Product | isochorismate synthase, chloroplastic isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029982.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capsicum annuum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCTGTAG GTGCAAGACA CTGCACCTTA AGGTTCATGG AACAACTTGA ATCAACATCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_016578337.1 |
| CDS | 200..2047 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_016722851.1 |
1 | ATGGCTGTAG GTGCAAGACA CTGCACCTTA AGGTTCATGG AACAACTTGA ATCAACATCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCa106650 | |
| Clone ID Related Accession (Same CDS sequence) | XM_016722852.1 | |
| Accession Version | XM_016722852.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1737bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-05-04 | |
| Organism | Capsicum annuum | |
| Product | isochorismate synthase, chloroplastic isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029982.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capsicum annuum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCTGTAG GTGCAAGACA CTGCACCTTA AGGTTCATGG AACAACTTGA ATCAACATCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_016578338.1 |
| CDS | 200..1936 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_016722852.1 |
1 | ATGGCTGTAG GTGCAAGACA CTGCACCTTA AGGTTCATGG AACAACTTGA ATCAACATCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.