LOC107872787 cDNA ORF clone, Capsicum annuum

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107872787
Entrez Gene ID	107872787
Full Name	uncharacterized membrane protein At4g09580-like
Gene Type	protein-coding
Organism	Capsicum annuum

mRNA and Protein(s)

mRNA	Protein	Name
XM_016719390.1	XP_016574876.1	uncharacterized membrane protein At4g09580-like

Pathways from BioSystems
Gene Ontology

The following LOC107872787 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107872787 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCa104038	XM_016719390.1 Latest version!	Capsicum annuum uncharacterized membrane protein At4g09580-like (LOC107872787), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107872787 ( XM_016719390.1 ) cDNA ORF clone, Capsicum annuum -> XP_016574876.1 Capsicum annuum uncharacterized membrane protein At4g09580-like (LOC107872787), mRNA.

Price & Availability↑

CloneID	OCa104038
Clone ID Related Accession (Same CDS sequence)	XM_016719390.1
Accession Version	XM_016719390.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 903bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-05-04
Organism	Capsicum annuum
Product	uncharacterized membrane protein At4g09580-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029982.1) and transcript sequence (JW068467.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capsicum annuum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 427 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGAAGAATA GGCTGTCACG TTCATCATCA TCACCAGCAT CATTGTTATT GTCAATGGCT 
GCACCAAGGA GTTTGGTAGT GGATACAGGG CGGTTGCTGA CAAGGGATGA GGAAAAGAAC 
TTAGGTTTGT CATCAGGGGG TGAGGATTCA CCATCTGGTA AAAGGTATAA GGAAGGGAAA 
TTTCCATTGT CAAGGTGGGA GTTTGCAGCA GCTTTAGGTG TATTTTTGGT GTTTTCAATT 
GGGTTGTTTT CTATATACTT GACAATGCCA GCTGCTGAGT ATGGAAAACT CAAGTTGCCT 
CGTTCACTTT CCGATCTACG GATGCTCAAG GACGATATTG GAACGTATGC CAAAGTTTAC 
CCTGCGAAAT TCATTCTCGG TTACTGCTCA ACATACATAT TCATGCAGAC ATTTATGATT 
CCTGGGACAA TATTCATGTC CTTGCTTGCT GGATCACTTT TTGGTGTTTT CAAAGGCCTT 
TTCTTGGTTG TCTTTAATGC CACAGCTGGT GCATCATCCT GTTTTTTTCT GTCTAAATTA 
ATTGGCAGGC CGATAGTTAG CTGGTTGTGG CCTGAAAAAT TAAGATTCTT CCAGGCAGAG 
ATAGCCAAGC GTCGGGATAA GTTGCTCAAC TATATGTTGT TTTTGAGAAT AACTCCAACA 
TTGCCAAATC TTTTCATCAA TTTGGCATCT CCAATCGTGG ATATACCATT CCATATTTTC 
TTCTCAGCCA CATTGGTTGG TCTCATTCCA GCCGCATATA TTACAGTCAA GGCCGGCCTA 
GCTCTTGGTG AGCTGAAGTC AGTCAAAGAT CTCTACGATC TCAAGACCTT GTCCGTGCTC 
TTCCTCATTG GTTTTATCTC GATATTACCT ACCATCTTGA AGAGGAAGAA AATATACGAA 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_016574876.1
CDS	515..1417
Translation	MKNRLSRSSSSPASLLLSMAAPRSLVVDTGRLLTRDEEKNLGLSSGGEDSPSGKRYKEGKFPLSRWEFAAALGVFLVFSIGLFSIYLTMPAAEYGKLKLPRSLSDLRMLKDDIGTYAKVYPAKFILGYCSTYIFMQTFMIPGTIFMSLLAGSLFGVFKGLFLVVFNATAGASSCFFLSKLIGRPIVSWLWPEKLRFFQAEIAKRRDKLLNYMLFLRITPTLPNLFINLASPIVDIPFHIFFSATLVGLIPAAYITVKAGLALGELKSVKDLYDLKTLSVLFLIGFISILPTILKRKKIYE

Target ORF information:

RefSeq Version	XM_016719390.1
Organism	Capsicum annuum
Definition	Capsicum annuum uncharacterized membrane protein At4g09580-like (LOC107872787), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016719390.1

ORF Insert Sequence:

ATGAAGAATA GGCTGTCACG TTCATCATCA TCACCAGCAT CATTGTTATT GTCAATGGCT 
GCACCAAGGA GTTTGGTAGT GGATACAGGG CGGTTGCTGA CAAGGGATGA GGAAAAGAAC 
TTAGGTTTGT CATCAGGGGG TGAGGATTCA CCATCTGGTA AAAGGTATAA GGAAGGGAAA 
TTTCCATTGT CAAGGTGGGA GTTTGCAGCA GCTTTAGGTG TATTTTTGGT GTTTTCAATT 
GGGTTGTTTT CTATATACTT GACAATGCCA GCTGCTGAGT ATGGAAAACT CAAGTTGCCT 
CGTTCACTTT CCGATCTACG GATGCTCAAG GACGATATTG GAACGTATGC CAAAGTTTAC 
CCTGCGAAAT TCATTCTCGG TTACTGCTCA ACATACATAT TCATGCAGAC ATTTATGATT 
CCTGGGACAA TATTCATGTC CTTGCTTGCT GGATCACTTT TTGGTGTTTT CAAAGGCCTT 
TTCTTGGTTG TCTTTAATGC CACAGCTGGT GCATCATCCT GTTTTTTTCT GTCTAAATTA 
ATTGGCAGGC CGATAGTTAG CTGGTTGTGG CCTGAAAAAT TAAGATTCTT CCAGGCAGAG 
ATAGCCAAGC GTCGGGATAA GTTGCTCAAC TATATGTTGT TTTTGAGAAT AACTCCAACA 
TTGCCAAATC TTTTCATCAA TTTGGCATCT CCAATCGTGG ATATACCATT CCATATTTTC 
TTCTCAGCCA CATTGGTTGG TCTCATTCCA GCCGCATATA TTACAGTCAA GGCCGGCCTA 
GCTCTTGGTG AGCTGAAGTC AGTCAAAGAT CTCTACGATC TCAAGACCTT GTCCGTGCTC 
TTCCTCATTG GTTTTATCTC GATATTACCT ACCATCTTGA AGAGGAAGAA AATATACGAA 
TAA