LOC107862064 cDNA ORF clone, Capsicum annuum

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107862064
Entrez Gene ID	107862064
Full Name	probable polygalacturonase
Gene Type	protein-coding
Organism	Capsicum annuum

mRNA and Protein(s)

mRNA	Protein	Name
XM_016707506.1	XP_016562992.1	probable polygalacturonase

Pathways from BioSystems
Gene Ontology

The following LOC107862064 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107862064 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCa95148	XM_016707506.1 Latest version!	Capsicum annuum probable polygalacturonase (LOC107862064), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107862064 ( XM_016707506.1 ) cDNA ORF clone, Capsicum annuum -> XP_016562992.1 Capsicum annuum probable polygalacturonase (LOC107862064), mRNA.

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CloneID	OCa95148
Clone ID Related Accession (Same CDS sequence)	XM_016707506.1
Accession Version	XM_016707506.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1464bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-05-04
Organism	Capsicum annuum
Product	probable polygalacturonase
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029979.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capsicum annuum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCGGATT CGCTCAGAAT CCAACACCGT AAACTCGAAT ACAAGCGTTT AATTCCATCA 
TATCTGTTAT CGCATCACAC ACTTCTAACT CTTCTGTGGA TCATTGGATT TATTGTGATC 
GTAATTTGGC AAAGGACTGC AGTTGAACGT CTTTTGATAT ATCGAGGTTT GGCACCATCT 
CCTAGGCCTA TACCTAAGCT ACGGCCTTTA GTTTTCAATC TATCTGATTT CGGAGCTGTT 
GGGGATGGCG TTACTGTAAA TACCAAGGCA TTTGAGAGGG CAATTTCGGA AATTAAGAAG 
AGAGGTGGTG GCCAGCTTAA TGTTCAGCCT GGTTATTGGC TTACGGCGCC GTTTAATCTC 
ACGAGTCATA TGACGTTGTT CTTAGCTGAA AATGCTGTTA TTCTTGGAAT TGATGATGAG 
AACTATTGGA CACTACTGCC TCCTTTGCCA TCATATGGAT ATGGAAGAGA ACGCCATGGG 
CCGCGTTATG GAAGTTTAAT CCACGGGCAA AATCTTAAGG ATGTTGTCAT AACAGGGCAT 
AATGGTACCA TTAACGGACA AGGCCGGTCG TGGTGGGAGA AATACCGCAA AAATCTTTTG 
AATTACACAA GGGGACCACT TCTTCAACTC ATGTGGTCAA GAGACATTCA CATTTCTGAT 
GTTACATTTC GAGATTCTCC GTTCTGGACT CTTCACCCTT ATGACTGCGA AAATGTTGTT 
ATAAGAAATG TAACAATTCT GGCTCCATTG ACTGAGGCCC CAAACACTGA TGGAATAGAC 
CCTGATTCAT GCGTGGATAT GGTGATAGAA GATAGTTATA TAAGCACGGG GGATGATGGT 
GTCGCAATCA AGAGTGGCTG GGATCAGTAT GGAATTGCAT ATTCCCGTCC ATCTTCCAAT 
ATCACTATCC GTAACCTCAC AGTGCGTTCA ATGGTTAGTG CTGGAGTATC AATTGGAAGT 
GAAATGTCTG GTGGAGTGTC AAATATAATA GTGGAGAACC TCCTTGTATG GAACTCAAAA 
AGAGGAATAA GAATTAAAAC TAGCGCTGGT AGGGGTGGTT ATATCCGACA TGTTATCTAC 
CGCAACCTGA CCCTACAGAA TGTTCGTGTG GGCATCGTAA TTAAGACAGA CTACAATGAA 
CATCCTGATG AAGGCTATGA TCCAAATGCT CTTCCAGTTA TTGAGGATAT AAGCTTTACT 
GGTATTCGTG GGCAAGGAGT TCGAATACCA GCACGTATTT ATGGAAGCCC TGAGATTCCT 
GTTCAGAATA TTACGTTTCA GAACATTACT GTAGGAATTA CATACAAGAA GAAGCGTATC 
TTCCAATGTT CTTTTGTTCA AGGACGTGTT ATTGGAAAAA TCTTCCCTGC TCCATGTGAG 
AATCTTGATT GGTATGATGA TGAAGGAAAA CTAGTTAGAC AATCAACAAA TAAGAATACG 
CAGGACTTGG ATTATGATGG TTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_016562992.1
CDS	135..1598
Translation	MPDSLRIQHRKLEYKRLIPSYLLSHHTLLTLLWIIGFIVIVIWQRTAVERLLIYRGLAPSPRPIPKLRPLVFNLSDFGAVGDGVTVNTKAFERAISEIKKRGGGQLNVQPGYWLTAPFNLTSHMTLFLAENAVILGIDDENYWTLLPPLPSYGYGRERHGPRYGSLIHGQNLKDVVITGHNGTINGQGRSWWEKYRKNLLNYTRGPLLQLMWSRDIHISDVTFRDSPFWTLHPYDCENVVIRNVTILAPLTEAPNTDGIDPDSCVDMVIEDSYISTGDDGVAIKSGWDQYGIAYSRPSSNITIRNLTVRSMVSAGVSIGSEMSGGVSNIIVENLLVWNSKRGIRIKTSAGRGGYIRHVIYRNLTLQNVRVGIVIKTDYNEHPDEGYDPNALPVIEDISFTGIRGQGVRIPARIYGSPEIPVQNITFQNITVGITYKKKRIFQCSFVQGRVIGKIFPAPCENLDWYDDEGKLVRQSTNKNTQDLDYDG

Target ORF information:

RefSeq Version	XM_016707506.1
Organism	Capsicum annuum
Definition	Capsicum annuum probable polygalacturonase (LOC107862064), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016707506.1

ORF Insert Sequence:

ATGCCGGATT CGCTCAGAAT CCAACACCGT AAACTCGAAT ACAAGCGTTT AATTCCATCA 
TATCTGTTAT CGCATCACAC ACTTCTAACT CTTCTGTGGA TCATTGGATT TATTGTGATC 
GTAATTTGGC AAAGGACTGC AGTTGAACGT CTTTTGATAT ATCGAGGTTT GGCACCATCT 
CCTAGGCCTA TACCTAAGCT ACGGCCTTTA GTTTTCAATC TATCTGATTT CGGAGCTGTT 
GGGGATGGCG TTACTGTAAA TACCAAGGCA TTTGAGAGGG CAATTTCGGA AATTAAGAAG 
AGAGGTGGTG GCCAGCTTAA TGTTCAGCCT GGTTATTGGC TTACGGCGCC GTTTAATCTC 
ACGAGTCATA TGACGTTGTT CTTAGCTGAA AATGCTGTTA TTCTTGGAAT TGATGATGAG 
AACTATTGGA CACTACTGCC TCCTTTGCCA TCATATGGAT ATGGAAGAGA ACGCCATGGG 
CCGCGTTATG GAAGTTTAAT CCACGGGCAA AATCTTAAGG ATGTTGTCAT AACAGGGCAT 
AATGGTACCA TTAACGGACA AGGCCGGTCG TGGTGGGAGA AATACCGCAA AAATCTTTTG 
AATTACACAA GGGGACCACT TCTTCAACTC ATGTGGTCAA GAGACATTCA CATTTCTGAT 
GTTACATTTC GAGATTCTCC GTTCTGGACT CTTCACCCTT ATGACTGCGA AAATGTTGTT 
ATAAGAAATG TAACAATTCT GGCTCCATTG ACTGAGGCCC CAAACACTGA TGGAATAGAC 
CCTGATTCAT GCGTGGATAT GGTGATAGAA GATAGTTATA TAAGCACGGG GGATGATGGT 
GTCGCAATCA AGAGTGGCTG GGATCAGTAT GGAATTGCAT ATTCCCGTCC ATCTTCCAAT 
ATCACTATCC GTAACCTCAC AGTGCGTTCA ATGGTTAGTG CTGGAGTATC AATTGGAAGT 
GAAATGTCTG GTGGAGTGTC AAATATAATA GTGGAGAACC TCCTTGTATG GAACTCAAAA 
AGAGGAATAA GAATTAAAAC TAGCGCTGGT AGGGGTGGTT ATATCCGACA TGTTATCTAC 
CGCAACCTGA CCCTACAGAA TGTTCGTGTG GGCATCGTAA TTAAGACAGA CTACAATGAA 
CATCCTGATG AAGGCTATGA TCCAAATGCT CTTCCAGTTA TTGAGGATAT AAGCTTTACT 
GGTATTCGTG GGCAAGGAGT TCGAATACCA GCACGTATTT ATGGAAGCCC TGAGATTCCT 
GTTCAGAATA TTACGTTTCA GAACATTACT GTAGGAATTA CATACAAGAA GAAGCGTATC 
TTCCAATGTT CTTTTGTTCA AGGACGTGTT ATTGGAAAAA TCTTCCCTGC TCCATGTGAG 
AATCTTGATT GGTATGATGA TGAAGGAAAA CTAGTTAGAC AATCAACAAA TAAGAATACG 
CAGGACTTGG ATTATGATGG TTGA