LOC107860799 cDNA ORF clone, Capsicum annuum

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107860799
Entrez Gene ID	107860799
Full Name	DNA cross-link repair protein SNM1
Gene Type	protein-coding
Organism	Capsicum annuum

mRNA and Protein(s)

mRNA	Protein	Name
XM_016706282.1	XP_016561768.1	DNA cross-link repair protein SNM1 isoform X1
XM_016706283.1	XP_016561769.1	DNA cross-link repair protein SNM1 isoform X2

Pathways from BioSystems
Gene Ontology

The following LOC107860799 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107860799 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCa94163	XM_016706282.1 Latest version!	Capsicum annuum DNA cross-link repair protein SNM1 (LOC107860799), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OCa94164	XM_016706283.1 Latest version!	Capsicum annuum DNA cross-link repair protein SNM1 (LOC107860799), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107860799 ( XM_016706282.1 ) cDNA ORF clone, Capsicum annuum -> XP_016561768.1 Capsicum annuum DNA cross-link repair protein SNM1 (LOC107860799), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OCa94163
Clone ID Related Accession (Same CDS sequence)	XM_016706282.1
Accession Version	XM_016706282.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1200bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-05-04
Organism	Capsicum annuum
Product	DNA cross-link repair protein SNM1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029978.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capsicum annuum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGACGA AGAGGAGTGA TGTTGAGGAG TGGAAGAAGA AGAAGAAGAG AAAGAGAGTG 
ACGATGAAGC AGAAGAATCT ATTCGAGTTG TGGGGCCTCA AAGATCCTCA TCCCAAACCC 
CCTGACCCTG ATGATGTGCA ACAGTCGAGA GCTGCTGCTG CTTCTCCCCT TAATTGCCCC 
TTCTATAAGA AGATCCCAGC AGGAACCCCC TTCACTGTCG ACGCCTTCCG CTATGCTCCC 
GTCAAAGCCT GCTCTGCCTA CTTCCTCACC CACTTCCACG CCGATCATTA TATTGGCTTG 
ACCAAATCAT GGTCACATGC CCCGATCTAC TGTACCAACC TCACTGCACG CTTACTTAAC 
ATCTCTCTTT ATGTTGCTCC ATCTTTCATC TGTCCTCTCG AATTAGGTAC TGAATACAAC 
ATTAAAGGAA TCAAAGTTAC CATGCTTGAT GCTAATCACT GCCCTGGTGC TGCTCTCATT 
CACTTCCGCC TCCCAAATGG ACAATCTTAC TTGCACACCG GAGACTTTAG GGCTTCCAAG 
CTCATGCAAT CCTATCCCCT TCTTGCAACC CAACGTATTA ATCTACTTTA CCTTGACACA 
ACCTATTGCA ATCCAAAGTA CAGGTTTCCT TCAAAAGAAG ATGTTCTGGA ATTTGTTGTA 
GGCGTCACAA GAAGATATTT GAATAATCAT CCAAAGACCA TCGTGGTTGT TGGTGCATAC 
ACCATTGGAA AAGAACAAGT GTATCTTGCC ATTTCCCAGG CACTAGGGGT AAAAATATAT 
GCAAATGCCT CCAGGAGGCG CATTCTTCGA TCTTTTGGCT GGGCTGGAAT TTCTGAAAAT 
CTGTCAACAA ATGGGAAGGA TACACCTTTG CACATATTGC CTATATCATC CTTGAGATTT 
GAGGTGCTGC AGCGTTATTT GGAATCACAA TACGGACAGT ACACTAGCAT GTTGGCATTC 
CGACCAACAG GTTGGACTTA CTCAGAGACC ATAGGGGAGA ATCTAAACTT AATAAAACCC 
ACTTCTAAGG GCAACATCAC TATTTATGGT GTTCCATACA GTGAGCATTC TAATTTCACA 
GAGCTGCAGG AATTTGTGCA GTTTCTGAGG CCAGAAAAGA TAATTCCTAC CGTCAATGTT 
GGAAATCCTG TTAATCGTGG CAAGATGCAA TCATACTTCC AGCAGTGGCT GAAAGCCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_016561768.1
CDS	274..1473
Translation	METKRSDVEEWKKKKKRKRVTMKQKNLFELWGLKDPHPKPPDPDDVQQSRAAAASPLNCPFYKKIPAGTPFTVDAFRYAPVKACSAYFLTHFHADHYIGLTKSWSHAPIYCTNLTARLLNISLYVAPSFICPLELGTEYNIKGIKVTMLDANHCPGAALIHFRLPNGQSYLHTGDFRASKLMQSYPLLATQRINLLYLDTTYCNPKYRFPSKEDVLEFVVGVTRRYLNNHPKTIVVVGAYTIGKEQVYLAISQALGVKIYANASRRRILRSFGWAGISENLSTNGKDTPLHILPISSLRFEVLQRYLESQYGQYTSMLAFRPTGWTYSETIGENLNLIKPTSKGNITIYGVPYSEHSNFTELQEFVQFLRPEKIIPTVNVGNPVNRGKMQSYFQQWLKA

Target ORF information:

RefSeq Version	XM_016706282.1
Organism	Capsicum annuum
Definition	Capsicum annuum DNA cross-link repair protein SNM1 (LOC107860799), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016706282.1

ORF Insert Sequence:

ATGGAGACGA AGAGGAGTGA TGTTGAGGAG TGGAAGAAGA AGAAGAAGAG AAAGAGAGTG 
ACGATGAAGC AGAAGAATCT ATTCGAGTTG TGGGGCCTCA AAGATCCTCA TCCCAAACCC 
CCTGACCCTG ATGATGTGCA ACAGTCGAGA GCTGCTGCTG CTTCTCCCCT TAATTGCCCC 
TTCTATAAGA AGATCCCAGC AGGAACCCCC TTCACTGTCG ACGCCTTCCG CTATGCTCCC 
GTCAAAGCCT GCTCTGCCTA CTTCCTCACC CACTTCCACG CCGATCATTA TATTGGCTTG 
ACCAAATCAT GGTCACATGC CCCGATCTAC TGTACCAACC TCACTGCACG CTTACTTAAC 
ATCTCTCTTT ATGTTGCTCC ATCTTTCATC TGTCCTCTCG AATTAGGTAC TGAATACAAC 
ATTAAAGGAA TCAAAGTTAC CATGCTTGAT GCTAATCACT GCCCTGGTGC TGCTCTCATT 
CACTTCCGCC TCCCAAATGG ACAATCTTAC TTGCACACCG GAGACTTTAG GGCTTCCAAG 
CTCATGCAAT CCTATCCCCT TCTTGCAACC CAACGTATTA ATCTACTTTA CCTTGACACA 
ACCTATTGCA ATCCAAAGTA CAGGTTTCCT TCAAAAGAAG ATGTTCTGGA ATTTGTTGTA 
GGCGTCACAA GAAGATATTT GAATAATCAT CCAAAGACCA TCGTGGTTGT TGGTGCATAC 
ACCATTGGAA AAGAACAAGT GTATCTTGCC ATTTCCCAGG CACTAGGGGT AAAAATATAT 
GCAAATGCCT CCAGGAGGCG CATTCTTCGA TCTTTTGGCT GGGCTGGAAT TTCTGAAAAT 
CTGTCAACAA ATGGGAAGGA TACACCTTTG CACATATTGC CTATATCATC CTTGAGATTT 
GAGGTGCTGC AGCGTTATTT GGAATCACAA TACGGACAGT ACACTAGCAT GTTGGCATTC 
CGACCAACAG GTTGGACTTA CTCAGAGACC ATAGGGGAGA ATCTAAACTT AATAAAACCC 
ACTTCTAAGG GCAACATCAC TATTTATGGT GTTCCATACA GTGAGCATTC TAATTTCACA 
GAGCTGCAGG AATTTGTGCA GTTTCTGAGG CCAGAAAAGA TAATTCCTAC CGTCAATGTT 
GGAAATCCTG TTAATCGTGG CAAGATGCAA TCATACTTCC AGCAGTGGCT GAAAGCCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC107860799 ( XM_016706283.1 ) cDNA ORF clone, Capsicum annuum -> XP_016561769.1 Capsicum annuum DNA cross-link repair protein SNM1 (LOC107860799), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OCa94164
Clone ID Related Accession (Same CDS sequence)	XM_016706283.1
Accession Version	XM_016706283.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1197bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-05-04
Organism	Capsicum annuum
Product	DNA cross-link repair protein SNM1 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029978.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capsicum annuum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGACGA AGAGGAGTGA TGTTGAGGAG TGGAAGAAGA AGAAGAAGAG AAAGAGAGTG 
ACGATGAAGC AGAAGAATCT ATTCGAGTTG TGGGGCCTCA AAGATCCTCA TCCCAAACCC 
CCTGACCCTG ATGATGTGCA ACAGTCGAGA GCTGCTGCTG CTTCTCCCCT TAATTGCCCC 
TTCTATAAGA AGATCCCAGG AACCCCCTTC ACTGTCGACG CCTTCCGCTA TGCTCCCGTC 
AAAGCCTGCT CTGCCTACTT CCTCACCCAC TTCCACGCCG ATCATTATAT TGGCTTGACC 
AAATCATGGT CACATGCCCC GATCTACTGT ACCAACCTCA CTGCACGCTT ACTTAACATC 
TCTCTTTATG TTGCTCCATC TTTCATCTGT CCTCTCGAAT TAGGTACTGA ATACAACATT 
AAAGGAATCA AAGTTACCAT GCTTGATGCT AATCACTGCC CTGGTGCTGC TCTCATTCAC 
TTCCGCCTCC CAAATGGACA ATCTTACTTG CACACCGGAG ACTTTAGGGC TTCCAAGCTC 
ATGCAATCCT ATCCCCTTCT TGCAACCCAA CGTATTAATC TACTTTACCT TGACACAACC 
TATTGCAATC CAAAGTACAG GTTTCCTTCA AAAGAAGATG TTCTGGAATT TGTTGTAGGC 
GTCACAAGAA GATATTTGAA TAATCATCCA AAGACCATCG TGGTTGTTGG TGCATACACC 
ATTGGAAAAG AACAAGTGTA TCTTGCCATT TCCCAGGCAC TAGGGGTAAA AATATATGCA 
AATGCCTCCA GGAGGCGCAT TCTTCGATCT TTTGGCTGGG CTGGAATTTC TGAAAATCTG 
TCAACAAATG GGAAGGATAC ACCTTTGCAC ATATTGCCTA TATCATCCTT GAGATTTGAG 
GTGCTGCAGC GTTATTTGGA ATCACAATAC GGACAGTACA CTAGCATGTT GGCATTCCGA 
CCAACAGGTT GGACTTACTC AGAGACCATA GGGGAGAATC TAAACTTAAT AAAACCCACT 
TCTAAGGGCA ACATCACTAT TTATGGTGTT CCATACAGTG AGCATTCTAA TTTCACAGAG 
CTGCAGGAAT TTGTGCAGTT TCTGAGGCCA GAAAAGATAA TTCCTACCGT CAATGTTGGA 
AATCCTGTTA ATCGTGGCAA GATGCAATCA TACTTCCAGC AGTGGCTGAA AGCCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_016561769.1
CDS	270..1466
Translation	METKRSDVEEWKKKKKRKRVTMKQKNLFELWGLKDPHPKPPDPDDVQQSRAAAASPLNCPFYKKIPGTPFTVDAFRYAPVKACSAYFLTHFHADHYIGLTKSWSHAPIYCTNLTARLLNISLYVAPSFICPLELGTEYNIKGIKVTMLDANHCPGAALIHFRLPNGQSYLHTGDFRASKLMQSYPLLATQRINLLYLDTTYCNPKYRFPSKEDVLEFVVGVTRRYLNNHPKTIVVVGAYTIGKEQVYLAISQALGVKIYANASRRRILRSFGWAGISENLSTNGKDTPLHILPISSLRFEVLQRYLESQYGQYTSMLAFRPTGWTYSETIGENLNLIKPTSKGNITIYGVPYSEHSNFTELQEFVQFLRPEKIIPTVNVGNPVNRGKMQSYFQQWLKA

Target ORF information:

RefSeq Version	XM_016706283.1
Organism	Capsicum annuum
Definition	Capsicum annuum DNA cross-link repair protein SNM1 (LOC107860799), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016706283.1

ORF Insert Sequence:

ATGGAGACGA AGAGGAGTGA TGTTGAGGAG TGGAAGAAGA AGAAGAAGAG AAAGAGAGTG 
ACGATGAAGC AGAAGAATCT ATTCGAGTTG TGGGGCCTCA AAGATCCTCA TCCCAAACCC 
CCTGACCCTG ATGATGTGCA ACAGTCGAGA GCTGCTGCTG CTTCTCCCCT TAATTGCCCC 
TTCTATAAGA AGATCCCAGG AACCCCCTTC ACTGTCGACG CCTTCCGCTA TGCTCCCGTC 
AAAGCCTGCT CTGCCTACTT CCTCACCCAC TTCCACGCCG ATCATTATAT TGGCTTGACC 
AAATCATGGT CACATGCCCC GATCTACTGT ACCAACCTCA CTGCACGCTT ACTTAACATC 
TCTCTTTATG TTGCTCCATC TTTCATCTGT CCTCTCGAAT TAGGTACTGA ATACAACATT 
AAAGGAATCA AAGTTACCAT GCTTGATGCT AATCACTGCC CTGGTGCTGC TCTCATTCAC 
TTCCGCCTCC CAAATGGACA ATCTTACTTG CACACCGGAG ACTTTAGGGC TTCCAAGCTC 
ATGCAATCCT ATCCCCTTCT TGCAACCCAA CGTATTAATC TACTTTACCT TGACACAACC 
TATTGCAATC CAAAGTACAG GTTTCCTTCA AAAGAAGATG TTCTGGAATT TGTTGTAGGC 
GTCACAAGAA GATATTTGAA TAATCATCCA AAGACCATCG TGGTTGTTGG TGCATACACC 
ATTGGAAAAG AACAAGTGTA TCTTGCCATT TCCCAGGCAC TAGGGGTAAA AATATATGCA 
AATGCCTCCA GGAGGCGCAT TCTTCGATCT TTTGGCTGGG CTGGAATTTC TGAAAATCTG 
TCAACAAATG GGAAGGATAC ACCTTTGCAC ATATTGCCTA TATCATCCTT GAGATTTGAG 
GTGCTGCAGC GTTATTTGGA ATCACAATAC GGACAGTACA CTAGCATGTT GGCATTCCGA 
CCAACAGGTT GGACTTACTC AGAGACCATA GGGGAGAATC TAAACTTAAT AAAACCCACT 
TCTAAGGGCA ACATCACTAT TTATGGTGTT CCATACAGTG AGCATTCTAA TTTCACAGAG 
CTGCAGGAAT TTGTGCAGTT TCTGAGGCCA GAAAAGATAA TTCCTACCGT CAATGTTGGA 
AATCCTGTTA ATCGTGGCAA GATGCAATCA TACTTCCAGC AGTGGCTGAA AGCCTGA