LOC107851112 cDNA ORF clone, Capsicum annuum

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107851112
Entrez Gene ID	107851112
Full Name	probable disease resistance protein At4g27220
Gene Type	protein-coding
Organism	Capsicum annuum

mRNA and Protein(s)

mRNA	Protein	Name
XM_016696029.1	XP_016551515.1	probable disease resistance protein At4g27220

Pathways from BioSystems
Gene Ontology

The following LOC107851112 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107851112 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCa90405	XM_016696029.1 Latest version!	Capsicum annuum probable disease resistance protein At4g27220 (LOC107851112), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$510.30 $729.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107851112 ( XM_016696029.1 ) cDNA ORF clone, Capsicum annuum -> XP_016551515.1 Capsicum annuum probable disease resistance protein At4g27220 (LOC107851112), mRNA.

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CloneID	OCa90405
Clone ID Related Accession (Same CDS sequence)	XM_016696029.1
Accession Version	XM_016696029.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2940bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-05-04
Organism	Capsicum annuum
Product	probable disease resistance protein At4g27220
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029977.1) and transcript sequence (GAXU01082359.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capsicum annuum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 9 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGGAAATCC TTTTTAATGC AGTAGGTGGC TTTGTTGTTG AGGTGGGAAA GTTTGTATCG 
AAATGCATCT ATCCTAGGAT TGAAAATATT GTCCATTTCT CGTCAAAAAT TGAAAATCTA 
AGGACTGAAA TGGAGGAGCT AACAGCGTTA AGAGATGATA TCAAACAAAA GGTGGCAGTA 
GCTGAGGGAG AAGGCTATAA ACGAAAACCA GATGTTATCA AGTGGCTCAA AGATGTTCAT 
AAGCTCCAGA ATGAATGGGA AGCTATGCAA GAAAGCATTG CAGCGGCTAC GATGCTTGTG 
TATAAATGCT GTCCAAAATG CAGCCTTCGC TCGGAAGTCT CCACTCAAGC AAAGAACATC 
CGGGATCAAT TCTGCAAGCT TAAAGAGGCC GGAGAAAACT TTGGATCCAA TTTGGTGGTA 
GAAAATTACC GGGTGAAAAA AGTTGAGTTC ATCCCGGGAC CATCGATACA AGGCCAGTTA 
ACAGCAACAA GGAATCTCAA CAAACTCCTC CGACTATTAG AAGATGTTAA GGTATTCATC 
ATAGGTGTGT GGGGAGCAGG AGGAGTTGGA AAAACAACAT TGGTGATTAA TCTAAACAAT 
GAGCTCCTAA AGACCGGTGT GCTAGGTTTT AAACTGTCTT TTGGTGTTGT GATATGGGTC 
ACCGTGCCCA AACCACCAAT AGACATAAGA AGGGTTCAAG CACAAATTGC CAGCAGATTA 
AACGTAAAGA TAGACAGCGA GGGAAGTGAT CGAAGCATTT CCAGCAAAAT TTGTGAAAGG 
CTCAAGGAAG AAACGAGTTT TCTTCTCATA CTAGATGATG TTTGGGAACC TATAAATTTG 
GATGATGTAG GTGTGCCCCA ACTTGCCACA AGAAGCAAGG TTATTATAAC TTCTCGATTT 
TCGAGTGTTT GTAGCCAAAT GAAAACAGAT GTGGAAATGA AGGTATACAC ATTGGATGAG 
GATGAATCTT GGCAACTGTT TGCAAAAAAT GTGGGAGATA TTGTCAATCT GGAGCAAATT 
CATCCACTGG CAAAGGAAAT TTCAAGAGAG TGTGACGGTT TACCTTTAGC AATCATGGTT 
ATTGGATCAT CTATGAGAGG GCAGATGAGG GTCGAGCTCT GGGAAGATGC TTTGAAATCA 
CTTAGAATGT CGGAACCTCA TAGCAAAGTT GTAGAAGATA AGGTTTACAA GGTCATCAAG 
TGGAGTTTTG ATTCTTTTGG ATCTCAGGAT ATTGAATCAT CCTCAGAGCA AAGAAGCAAA 
CGTGTGAACA AAAAGAGAGG TGACATTCAA AGTTGTTTCT TGTATTGCTC CTTATATCCG 
GCGGCTATTC CAACAGATGA TCTGATACAT TGCTGGTGGA TAGAGGGGTT GCTTGGTGAA 
CATGACACAT ACGAAGAAGC CTACAACAGG GGAATCACAA TGACTGAGAG ATTAAAGGAT 
GCATGCTTGC TAGAATCCCA TGGGATGGAT TCTGCAAAGA TGCATGACGT GGTTCGTGAT 
GTTTCTAGAT GGATAGCTAA TTCCTTTGGG GATGAACAAA ACCTTGTTTT TCAAGCTGGA 
ATTGGATTGA CTGAGATTTC GCATATTAAA GTATCAACTT CTGTCAAGAG AATATCTTTC 
GCAAGCAGCA ATATCTCTGG CCTACCTGAT AACTTCATGG AATGCCCAGA GGCAACAACT 
TTATTATTGC AAGATAATGG TCACCTTTGG GATATTTCCC GTGATTTCTT TTTGGCATTT 
CCATCCCTAA GAGTCTTGAA TTTGAGCCAA ACAGGTATTA GAGCACTGCC TTCTTCCATC 
AATAGTTTAT GTCAACTACG TGCTCTAATA CTAAAAAATT GCTCCTATTT GGTAGAGTTA 
CCACCTATTG GTAATCTCTG CCATTTACAA TTGCTCGATT GTGATAAGAC ATCATTACTT 
TATCTGCCGC AAGGAATGGA CAAACTGACA AATCTGAGGC TATTGAATCT GCCTGTAGGT 
CAGTTGAAGG AGATCATTGG CCAAGGATTT TTCCTCAGTT TTTCAAGCAT AGAAATGTTA 
AATATGAAGG GTATCTGTGT TGGATCAACG TCTTTAGATG AGATATTATC TCTACACAAT 
CTGACTTCTC TTTTTATTAA ATTGGATAGC TCATCAATTT TCAATAGAGA GCCCACCTGG 
ATGACTAGAT TGAAAAGATT TCATATTATA ATCGGGGACT ATCCAACGCA AGGAAATATC 
AACAAGTCAG CAAGGACAAT ATGTGTTTCT GAATGTGAAA TTTTCAGTAA CGGAGAGCTC 
TCAGGCATGT TGCAGTTTGC TTCAGATTTG TACTTGGAAT ATTGCAAGGA TCTCAGCAAG 
TTGATTGGAT GCAACAGTTT TAATGGATTA AAATCACTAT CCATACAATC AAGTTTAATG 
GAAGAAGGAA TTCGACAGTT TGACCCTTTT CCAAATCTCG AATATCTCAG CCTCAAATTT 
GTATATAATT TAAGGAGTGT TTCCGATTTC AGTCAACATC TAGGTTTTAG ATTTTCTAAA 
TTACGCCAAC TAGAAATATC TGATTGTCGA AATTTAAAAT ATCTTTTTAA AGTTGGAGCT 
TTCTCTATAC CCAAGCACTT GGATGAAATT ACAGTTGAAG ATTGTCAACG GTTGGTAGCG 
TTGATTGCGC AATACGCCTC AACTCAGACA ACACTTGTCA ACTCAGAAAT TCCAAGAGTT 
CGGAAGTTAG TGTTTAGAAA ATTATCAAAT TTAACAATGT TGAGAGAGCC TCAGCGTATG 
TGGGAACACC TGGAGGAACT TAAAGTTTAT GGTTGCGCTG AAATAAGGAA GTTGCCTCGC 
TCTATTCAAA CCTCCAATTA CATCAAACTA ATAGAAGGAT CACCAATGTG GTGGAGGCAA 
CTCGAATGGG ATGACGATAT CTTCAAGTCA AATTTAGAAA AGTGCTTCCA ATGGTCATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_016551515.1
CDS	705..3644
Translation	MEILFNAVGGFVVEVGKFVSKCIYPRIENIVHFSSKIENLRTEMEELTALRDDIKQKVAVAEGEGYKRKPDVIKWLKDVHKLQNEWEAMQESIAAATMLVYKCCPKCSLRSEVSTQAKNIRDQFCKLKEAGENFGSNLVVENYRVKKVEFIPGPSIQGQLTATRNLNKLLRLLEDVKVFIIGVWGAGGVGKTTLVINLNNELLKTGVLGFKLSFGVVIWVTVPKPPIDIRRVQAQIASRLNVKIDSEGSDRSISSKICERLKEETSFLLILDDVWEPINLDDVGVPQLATRSKVIITSRFSSVCSQMKTDVEMKVYTLDEDESWQLFAKNVGDIVNLEQIHPLAKEISRECDGLPLAIMVIGSSMRGQMRVELWEDALKSLRMSEPHSKVVEDKVYKVIKWSFDSFGSQDIESSSEQRSKRVNKKRGDIQSCFLYCSLYPAAIPTDDLIHCWWIEGLLGEHDTYEEAYNRGITMTERLKDACLLESHGMDSAKMHDVVRDVSRWIANSFGDEQNLVFQAGIGLTEISHIKVSTSVKRISFASSNISGLPDNFMECPEATTLLLQDNGHLWDISRDFFLAFPSLRVLNLSQTGIRALPSSINSLCQLRALILKNCSYLVELPPIGNLCHLQLLDCDKTSLLYLPQGMDKLTNLRLLNLPVGQLKEIIGQGFFLSFSSIEMLNMKGICVGSTSLDEILSLHNLTSLFIKLDSSSIFNREPTWMTRLKRFHIIIGDYPTQGNINKSARTICVSECEIFSNGELSGMLQFASDLYLEYCKDLSKLIGCNSFNGLKSLSIQSSLMEEGIRQFDPFPNLEYLSLKFVYNLRSVSDFSQHLGFRFSKLRQLEISDCRNLKYLFKVGAFSIPKHLDEITVEDCQRLVALIAQYASTQTTLVNSEIPRVRKLVFRKLSNLTMLREPQRMWEHLEELKVYGCAEIRKLPRSIQTSNYIKLIEGSPMWWRQLEWDDDIFKSNLEKCFQWS

Target ORF information:

RefSeq Version	XM_016696029.1
Organism	Capsicum annuum
Definition	Capsicum annuum probable disease resistance protein At4g27220 (LOC107851112), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016696029.1

ORF Insert Sequence:

ATGGAAATCC TTTTTAATGC AGTAGGTGGC TTTGTTGTTG AGGTGGGAAA GTTTGTATCG 
AAATGCATCT ATCCTAGGAT TGAAAATATT GTCCATTTCT CGTCAAAAAT TGAAAATCTA 
AGGACTGAAA TGGAGGAGCT AACAGCGTTA AGAGATGATA TCAAACAAAA GGTGGCAGTA 
GCTGAGGGAG AAGGCTATAA ACGAAAACCA GATGTTATCA AGTGGCTCAA AGATGTTCAT 
AAGCTCCAGA ATGAATGGGA AGCTATGCAA GAAAGCATTG CAGCGGCTAC GATGCTTGTG 
TATAAATGCT GTCCAAAATG CAGCCTTCGC TCGGAAGTCT CCACTCAAGC AAAGAACATC 
CGGGATCAAT TCTGCAAGCT TAAAGAGGCC GGAGAAAACT TTGGATCCAA TTTGGTGGTA 
GAAAATTACC GGGTGAAAAA AGTTGAGTTC ATCCCGGGAC CATCGATACA AGGCCAGTTA 
ACAGCAACAA GGAATCTCAA CAAACTCCTC CGACTATTAG AAGATGTTAA GGTATTCATC 
ATAGGTGTGT GGGGAGCAGG AGGAGTTGGA AAAACAACAT TGGTGATTAA TCTAAACAAT 
GAGCTCCTAA AGACCGGTGT GCTAGGTTTT AAACTGTCTT TTGGTGTTGT GATATGGGTC 
ACCGTGCCCA AACCACCAAT AGACATAAGA AGGGTTCAAG CACAAATTGC CAGCAGATTA 
AACGTAAAGA TAGACAGCGA GGGAAGTGAT CGAAGCATTT CCAGCAAAAT TTGTGAAAGG 
CTCAAGGAAG AAACGAGTTT TCTTCTCATA CTAGATGATG TTTGGGAACC TATAAATTTG 
GATGATGTAG GTGTGCCCCA ACTTGCCACA AGAAGCAAGG TTATTATAAC TTCTCGATTT 
TCGAGTGTTT GTAGCCAAAT GAAAACAGAT GTGGAAATGA AGGTATACAC ATTGGATGAG 
GATGAATCTT GGCAACTGTT TGCAAAAAAT GTGGGAGATA TTGTCAATCT GGAGCAAATT 
CATCCACTGG CAAAGGAAAT TTCAAGAGAG TGTGACGGTT TACCTTTAGC AATCATGGTT 
ATTGGATCAT CTATGAGAGG GCAGATGAGG GTCGAGCTCT GGGAAGATGC TTTGAAATCA 
CTTAGAATGT CGGAACCTCA TAGCAAAGTT GTAGAAGATA AGGTTTACAA GGTCATCAAG 
TGGAGTTTTG ATTCTTTTGG ATCTCAGGAT ATTGAATCAT CCTCAGAGCA AAGAAGCAAA 
CGTGTGAACA AAAAGAGAGG TGACATTCAA AGTTGTTTCT TGTATTGCTC CTTATATCCG 
GCGGCTATTC CAACAGATGA TCTGATACAT TGCTGGTGGA TAGAGGGGTT GCTTGGTGAA 
CATGACACAT ACGAAGAAGC CTACAACAGG GGAATCACAA TGACTGAGAG ATTAAAGGAT 
GCATGCTTGC TAGAATCCCA TGGGATGGAT TCTGCAAAGA TGCATGACGT GGTTCGTGAT 
GTTTCTAGAT GGATAGCTAA TTCCTTTGGG GATGAACAAA ACCTTGTTTT TCAAGCTGGA 
ATTGGATTGA CTGAGATTTC GCATATTAAA GTATCAACTT CTGTCAAGAG AATATCTTTC 
GCAAGCAGCA ATATCTCTGG CCTACCTGAT AACTTCATGG AATGCCCAGA GGCAACAACT 
TTATTATTGC AAGATAATGG TCACCTTTGG GATATTTCCC GTGATTTCTT TTTGGCATTT 
CCATCCCTAA GAGTCTTGAA TTTGAGCCAA ACAGGTATTA GAGCACTGCC TTCTTCCATC 
AATAGTTTAT GTCAACTACG TGCTCTAATA CTAAAAAATT GCTCCTATTT GGTAGAGTTA 
CCACCTATTG GTAATCTCTG CCATTTACAA TTGCTCGATT GTGATAAGAC ATCATTACTT 
TATCTGCCGC AAGGAATGGA CAAACTGACA AATCTGAGGC TATTGAATCT GCCTGTAGGT 
CAGTTGAAGG AGATCATTGG CCAAGGATTT TTCCTCAGTT TTTCAAGCAT AGAAATGTTA 
AATATGAAGG GTATCTGTGT TGGATCAACG TCTTTAGATG AGATATTATC TCTACACAAT 
CTGACTTCTC TTTTTATTAA ATTGGATAGC TCATCAATTT TCAATAGAGA GCCCACCTGG 
ATGACTAGAT TGAAAAGATT TCATATTATA ATCGGGGACT ATCCAACGCA AGGAAATATC 
AACAAGTCAG CAAGGACAAT ATGTGTTTCT GAATGTGAAA TTTTCAGTAA CGGAGAGCTC 
TCAGGCATGT TGCAGTTTGC TTCAGATTTG TACTTGGAAT ATTGCAAGGA TCTCAGCAAG 
TTGATTGGAT GCAACAGTTT TAATGGATTA AAATCACTAT CCATACAATC AAGTTTAATG 
GAAGAAGGAA TTCGACAGTT TGACCCTTTT CCAAATCTCG AATATCTCAG CCTCAAATTT 
GTATATAATT TAAGGAGTGT TTCCGATTTC AGTCAACATC TAGGTTTTAG ATTTTCTAAA 
TTACGCCAAC TAGAAATATC TGATTGTCGA AATTTAAAAT ATCTTTTTAA AGTTGGAGCT 
TTCTCTATAC CCAAGCACTT GGATGAAATT ACAGTTGAAG ATTGTCAACG GTTGGTAGCG 
TTGATTGCGC AATACGCCTC AACTCAGACA ACACTTGTCA ACTCAGAAAT TCCAAGAGTT 
CGGAAGTTAG TGTTTAGAAA ATTATCAAAT TTAACAATGT TGAGAGAGCC TCAGCGTATG 
TGGGAACACC TGGAGGAACT TAAAGTTTAT GGTTGCGCTG AAATAAGGAA GTTGCCTCGC 
TCTATTCAAA CCTCCAATTA CATCAAACTA ATAGAAGGAT CACCAATGTG GTGGAGGCAA 
CTCGAATGGG ATGACGATAT CTTCAAGTCA AATTTAGAAA AGTGCTTCCA ATGGTCATAG