LOC107839919 cDNA ORF clone, Capsicum annuum

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107839919
Entrez Gene ID	107839919
Full Name	uncharacterized LOC107839919
Gene Type	protein-coding
Organism	Capsicum annuum

mRNA and Protein(s)

mRNA	Protein	Name
XM_016683584.1	XP_016539070.1	uncharacterized protein LOC107839919

Pathways from BioSystems
Gene Ontology

The following LOC107839919 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107839919 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCa111087	XM_016683584.1 Latest version!	Capsicum annuum uncharacterized LOC107839919 (LOC107839919), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$713.30 $1019.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107839919 ( XM_016683584.1 ) cDNA ORF clone, Capsicum annuum -> XP_016539070.1 Capsicum annuum uncharacterized LOC107839919 (LOC107839919), mRNA.

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CloneID	OCa111087
Clone ID Related Accession (Same CDS sequence)	XM_016683584.1
Accession Version	XM_016683584.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3522bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-05-04
Organism	Capsicum annuum
Product	uncharacterized protein LOC107839919
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029984.1) and transcript sequence (GAXU01012915.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capsicum annuum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 1759 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGGAAGTGG AATCGCCGGA AAGAGGAAAA ATAGGTGGAA TAGCGATGGA AATTCCGGCG 
AGTGATGACG GAGCAACGAC GTTGTCGCCG CCGAGGATTC CACAAAGGCT TCTTCAAAAG 
CTGTCGGAGC CTAAGACTTC TTCGCCGTCT ACTGCTGAAG AAATTGAGGC AAAGCTTCGT 
GGCGCCGATC TTCGTCGGCA GAAATTCTAT GAGTATCTGT CAAGCAAAGC CAGACCGAAG 
CCCAGAAGCC CCTCACAGTC TCCAACTCAT GGAAAAGATC TTGGACAACG TCTTGAGGCT 
AAACTTCAGG CTGCCGAGGA GAAAAGGATG AGCCTTCTAG CAAAGGCTAA GATGCGTCTG 
GCAAAATTAG ATGAGTTGAG GCAGGCAGCT AAAACTGGAG CAGAAATGCG CTTCAGACAG 
GAACGAGCTG AACTGGGTAC AAAGGTGGAG TTGCGTGTTC AGCAGGCTGA GGTAAACAGA 
ATGCTTCTCC TAAAAGCTAC TCGCCAAAGG AGGGCCACAC TGAGGGAGAG GACTTCTCAA 
TCATTACTAC GTCGAATGGC TCGTGAGAGC AAGTATAAAG AGCGAGTGCG TGCCGCAATT 
TGTCAAAAGC GTGCAGCTGC TGAGAAGAAG AGGATGGGGT TACTAGAAGC CGAAAAGAGG 
AGGGCAAGTG CTAGAGTCAT GCAAGTGCGG AGTGCTGCGA AGTTCGTTTC TCATCAGGAA 
GAGGTCAAAA GAAGGGAAAT GAAAATTAAA ATAGAAGACA AGCTACAAAG GGCAAAGAGA 
CAAAGAGAAG AATACTTGAT GCAGAGAGGA AGATCACATA ACTCCTTTGG TGACAGTTAT 
GAAAAGATAC ATGACCAGGC TGACCTGCTT TCAAGGAAAT TGGCAAGGTG TTGGAAGCAG 
TTCCTTGCAC GTGAAAAGAC GACCTTCCAT ATTGCAAAAG CTTATAGTAT GCTGAGTATA 
AATGAGAATA CAGCTAAGAT AATGCCATTT GAGCAGCTGG CAATGAAGAT TGAATCGCCT 
AATACACTTC AGAGAGCGAA AAGTTTACTC GACCGGCTTG AACTTCGCTT CAAATTGTTG 
CGTGATATTG ACAGCTCCAC AAGTACCTTT GGTTGGGGTG ACATCGATCA TCTTCTCAAG 
CGAGTAGCTT CACCCAAAAA GAAAGCGACA CCGAGGAGAT CTCTCCGCAG CGGTAGTGCA 
AGAAAAACAG TATCCAAGCT ACCAGCAGCC GAAACTCCAG TTAAGTTGTC GAGGTATCCA 
GTTCGAATTG TGCTGTGTGC ATATATGGTT CTAGGTCACC CTGATGCAGT GTTCAGTGGT 
AAAGGGGACC GTGAGATTGC CCTGGCCAAA TCTGCTGAAA AATTTGTCAG AGTGTTTGAA 
CTGCTGGTTA GGATAATGTT GAATGGCTCC ATCCAGACTT CCGATGGGGA TTCTGATTGC 
GGGTTGGCCA AGCGCAGGAC TTTCAAATCT CAACTCACGG AGTTTGATTC AGCATGGTGC 
TCTTACTTGA ATAGCTTTGT GGTGTGGAAG GTTAGAGATG CCCAGTCTTT AGAGGAGGAT 
TTGGTTAGAG CTGCTTGCCA GCTTGAACTC TCTATGATTC AAAAATGCCG AATGACTCCT 
GGAGGAGATG GTGGTGCTCT TACTCATGAT CTGAAGGCTA TACAGAAACA GGTGACAGAA 
GATCAGAGAC TTCTCAGAGA AAAGGTGCTT AATATTAGTG GAGATGCTGG TATTGAACGG 
ATGGATAATG CAATTTCCGA CACACGAAAC AAATATTTTG AAGCTAAAGA AAATGGAAGT 
CCTGTGGGTT CTCCAATTAT GCATTCAGTA TCTCCTAGCT CAGCTGCTCT TGCAAGTAAC 
TCTTCTTCTC TTGGGGGTTC AAATAAAGGG GAGAATTTGA TTGAGGTAAG TGATCAGAAG 
CCAAACCGTG TGGTTCGCTC CTTATTTAGG GATGAACTAC ATCCAAACGT CAGTTCTTCT 
GCCAATAACA CCATGCAGTC ATCCCGCATC GGTGAGGGAT TGGAAGTGGA GAATGAATTA 
ATTGTGAACG AGTCTCTTCA TGGTCAGCAT CTTGAATTTG CTGAGTCTAC AGAAGTTGCT 
GATAATCACG ATAATAGTAT AAAGGACAAA ATTAGGGAAA CAATGGAGAA GGCTTTCTGG 
GATAGTGTCA TGGAATCCAT GAAAAATGAT GGACCGAGAT ACAGCCGAGT TGTTGATCTA 
ATGAGAGAAG CAAGAGATGA ACTTTGTAGC TTGGCTCCTC AGAGCTGGAG ACAAGAGATT 
AGTGAAGCTA TAGATATAGA TATTCTCTCT CAGTTGTTGA TCTCAGCCAA ACTCGACATG 
GATTATCTTC AAAAGATCAT GGATTCTACG CTGGTCACTT TGCAGAAACT CTCCTCTCCA 
GCTAAGGAGG ATGAGCTAAA AGCAAATAGT CAAAAGTTAT TTAGAGAATT AGCTGATATA 
TGTCGGGATG GGTCAGGGGA TTCATTTATT CTGGCACTAG TCCGGGGTTT GCGTTTTGTA 
CTGGAAGAGA TACAGCTGTT AAAACAAGAA ATAAGCAAGG CAAGGATTAG AATGTTGGAG 
CCGATTCTCA AGGGACCTGC AGCTTTTGAT TATTTAAGGA AAGCTTTCAC CAAGCGTTAT 
GGTCTTCCTT CCGTCGCTAT GACTGCCTTA CCCTTAACAT GGAAGTGGCT TTTATCTGTT 
AAAGATTCCA TGAACCAGGA ATTGAATGAA CACAAGGAGG CTCTATCGGG CCTGACAAGT 
GGACAGGATC GTTTCCTTCC TTCTTCCGCC CTTAGAACTG GAGGAAGCTT TTCAGTTAAA 
ATGAATAAAA ACCATTCTTC ACCTTCGACC ACTACAGAAG GTGTAGATGA ATGCACGGGG 
GAGAAAGTTG ATTTATTGGT GAGGCTGGGC TTATTAAAGT TGGTAAATGC TGTATCTGGC 
TTGACGCAGG AAGGGTTGCC TGAAACTATG CAGCTGAACT TCTTCAGACT AAGGGCTATT 
CAGGCAAAAA TCCAAAAGAT CGTCGTAATA GCAACCAGCA TTCTAGTCCA AAGACAGGTT 
CTTCAGAGTA TGCAAATGGT ATCAAGTGCA GCAGATATGG ATAAAATTGT TCAGGGGAGT 
GCCAAATCAC TTTCTGAGAT CCTAGACTCC AACAAAGATG CTGGTATTGA AGAGATCATA 
GAGACACTTG GCAAACCTTT AGAGCATGGC CACGATAGTA CTGATGTGAT GAAGCTTCAG 
CAGATCAAGG AGATCATGGC AAGGATGTTA TCCAAGAGCC TGCAAGCTGG GGATGCTATT 
TTTGTACACG TATCCCGCGC TATATATTTG GCTGGAAGGG GAGTTGTACT TGGGGGAACC 
GGAAGAAATG GAAAAGAATT GTCTGAAATG GCTCTGCGGC AGGTGGGAGC AATTGTTCTG 
ATTGACGAGA TTGTGGAAGC TGCCTCTGTA TTGGTTATGG CAGCACGCGT GACGGTGAAT 
GTTCATGGTC CTTGGTATGC ACAGTTAGTA GCTAAAACGT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_016539070.1
CDS	1236..4757
Translation	MEVESPERGKIGGIAMEIPASDDGATTLSPPRIPQRLLQKLSEPKTSSPSTAEEIEAKLRGADLRRQKFYEYLSSKARPKPRSPSQSPTHGKDLGQRLEAKLQAAEEKRMSLLAKAKMRLAKLDELRQAAKTGAEMRFRQERAELGTKVELRVQQAEVNRMLLLKATRQRRATLRERTSQSLLRRMARESKYKERVRAAICQKRAAAEKKRMGLLEAEKRRASARVMQVRSAAKFVSHQEEVKRREMKIKIEDKLQRAKRQREEYLMQRGRSHNSFGDSYEKIHDQADLLSRKLARCWKQFLAREKTTFHIAKAYSMLSINENTAKIMPFEQLAMKIESPNTLQRAKSLLDRLELRFKLLRDIDSSTSTFGWGDIDHLLKRVASPKKKATPRRSLRSGSARKTVSKLPAAETPVKLSRYPVRIVLCAYMVLGHPDAVFSGKGDREIALAKSAEKFVRVFELLVRIMLNGSIQTSDGDSDCGLAKRRTFKSQLTEFDSAWCSYLNSFVVWKVRDAQSLEEDLVRAACQLELSMIQKCRMTPGGDGGALTHDLKAIQKQVTEDQRLLREKVLNISGDAGIERMDNAISDTRNKYFEAKENGSPVGSPIMHSVSPSSAALASNSSSLGGSNKGENLIEVSDQKPNRVVRSLFRDELHPNVSSSANNTMQSSRIGEGLEVENELIVNESLHGQHLEFAESTEVADNHDNSIKDKIRETMEKAFWDSVMESMKNDGPRYSRVVDLMREARDELCSLAPQSWRQEISEAIDIDILSQLLISAKLDMDYLQKIMDSTLVTLQKLSSPAKEDELKANSQKLFRELADICRDGSGDSFILALVRGLRFVLEEIQLLKQEISKARIRMLEPILKGPAAFDYLRKAFTKRYGLPSVAMTALPLTWKWLLSVKDSMNQELNEHKEALSGLTSGQDRFLPSSALRTGGSFSVKMNKNHSSPSTTTEGVDECTGEKVDLLVRLGLLKLVNAVSGLTQEGLPETMQLNFFRLRAIQAKIQKIVVIATSILVQRQVLQSMQMVSSAADMDKIVQGSAKSLSEILDSNKDAGIEEIIETLGKPLEHGHDSTDVMKLQQIKEIMARMLSKSLQAGDAIFVHVSRAIYLAGRGVVLGGTGRNGKELSEMALRQVGAIVLIDEIVEAASVLVMAARVTVNVHGPWYAQLVAKT

Target ORF information:

RefSeq Version	XM_016683584.1
Organism	Capsicum annuum
Definition	Capsicum annuum uncharacterized LOC107839919 (LOC107839919), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016683584.1

ORF Insert Sequence:

ATGGAAGTGG AATCGCCGGA AAGAGGAAAA ATAGGTGGAA TAGCGATGGA AATTCCGGCG 
AGTGATGACG GAGCAACGAC GTTGTCGCCG CCGAGGATTC CACAAAGGCT TCTTCAAAAG 
CTGTCGGAGC CTAAGACTTC TTCGCCGTCT ACTGCTGAAG AAATTGAGGC AAAGCTTCGT 
GGCGCCGATC TTCGTCGGCA GAAATTCTAT GAGTATCTGT CAAGCAAAGC CAGACCGAAG 
CCCAGAAGCC CCTCACAGTC TCCAACTCAT GGAAAAGATC TTGGACAACG TCTTGAGGCT 
AAACTTCAGG CTGCCGAGGA GAAAAGGATG AGCCTTCTAG CAAAGGCTAA GATGCGTCTG 
GCAAAATTAG ATGAGTTGAG GCAGGCAGCT AAAACTGGAG CAGAAATGCG CTTCAGACAG 
GAACGAGCTG AACTGGGTAC AAAGGTGGAG TTGCGTGTTC AGCAGGCTGA GGTAAACAGA 
ATGCTTCTCC TAAAAGCTAC TCGCCAAAGG AGGGCCACAC TGAGGGAGAG GACTTCTCAA 
TCATTACTAC GTCGAATGGC TCGTGAGAGC AAGTATAAAG AGCGAGTGCG TGCCGCAATT 
TGTCAAAAGC GTGCAGCTGC TGAGAAGAAG AGGATGGGGT TACTAGAAGC CGAAAAGAGG 
AGGGCAAGTG CTAGAGTCAT GCAAGTGCGG AGTGCTGCGA AGTTCGTTTC TCATCAGGAA 
GAGGTCAAAA GAAGGGAAAT GAAAATTAAA ATAGAAGACA AGCTACAAAG GGCAAAGAGA 
CAAAGAGAAG AATACTTGAT GCAGAGAGGA AGATCACATA ACTCCTTTGG TGACAGTTAT 
GAAAAGATAC ATGACCAGGC TGACCTGCTT TCAAGGAAAT TGGCAAGGTG TTGGAAGCAG 
TTCCTTGCAC GTGAAAAGAC GACCTTCCAT ATTGCAAAAG CTTATAGTAT GCTGAGTATA 
AATGAGAATA CAGCTAAGAT AATGCCATTT GAGCAGCTGG CAATGAAGAT TGAATCGCCT 
AATACACTTC AGAGAGCGAA AAGTTTACTC GACCGGCTTG AACTTCGCTT CAAATTGTTG 
CGTGATATTG ACAGCTCCAC AAGTACCTTT GGTTGGGGTG ACATCGATCA TCTTCTCAAG 
CGAGTAGCTT CACCCAAAAA GAAAGCGACA CCGAGGAGAT CTCTCCGCAG CGGTAGTGCA 
AGAAAAACAG TATCCAAGCT ACCAGCAGCC GAAACTCCAG TTAAGTTGTC GAGGTATCCA 
GTTCGAATTG TGCTGTGTGC ATATATGGTT CTAGGTCACC CTGATGCAGT GTTCAGTGGT 
AAAGGGGACC GTGAGATTGC CCTGGCCAAA TCTGCTGAAA AATTTGTCAG AGTGTTTGAA 
CTGCTGGTTA GGATAATGTT GAATGGCTCC ATCCAGACTT CCGATGGGGA TTCTGATTGC 
GGGTTGGCCA AGCGCAGGAC TTTCAAATCT CAACTCACGG AGTTTGATTC AGCATGGTGC 
TCTTACTTGA ATAGCTTTGT GGTGTGGAAG GTTAGAGATG CCCAGTCTTT AGAGGAGGAT 
TTGGTTAGAG CTGCTTGCCA GCTTGAACTC TCTATGATTC AAAAATGCCG AATGACTCCT 
GGAGGAGATG GTGGTGCTCT TACTCATGAT CTGAAGGCTA TACAGAAACA GGTGACAGAA 
GATCAGAGAC TTCTCAGAGA AAAGGTGCTT AATATTAGTG GAGATGCTGG TATTGAACGG 
ATGGATAATG CAATTTCCGA CACACGAAAC AAATATTTTG AAGCTAAAGA AAATGGAAGT 
CCTGTGGGTT CTCCAATTAT GCATTCAGTA TCTCCTAGCT CAGCTGCTCT TGCAAGTAAC 
TCTTCTTCTC TTGGGGGTTC AAATAAAGGG GAGAATTTGA TTGAGGTAAG TGATCAGAAG 
CCAAACCGTG TGGTTCGCTC CTTATTTAGG GATGAACTAC ATCCAAACGT CAGTTCTTCT 
GCCAATAACA CCATGCAGTC ATCCCGCATC GGTGAGGGAT TGGAAGTGGA GAATGAATTA 
ATTGTGAACG AGTCTCTTCA TGGTCAGCAT CTTGAATTTG CTGAGTCTAC AGAAGTTGCT 
GATAATCACG ATAATAGTAT AAAGGACAAA ATTAGGGAAA CAATGGAGAA GGCTTTCTGG 
GATAGTGTCA TGGAATCCAT GAAAAATGAT GGACCGAGAT ACAGCCGAGT TGTTGATCTA 
ATGAGAGAAG CAAGAGATGA ACTTTGTAGC TTGGCTCCTC AGAGCTGGAG ACAAGAGATT 
AGTGAAGCTA TAGATATAGA TATTCTCTCT CAGTTGTTGA TCTCAGCCAA ACTCGACATG 
GATTATCTTC AAAAGATCAT GGATTCTACG CTGGTCACTT TGCAGAAACT CTCCTCTCCA 
GCTAAGGAGG ATGAGCTAAA AGCAAATAGT CAAAAGTTAT TTAGAGAATT AGCTGATATA 
TGTCGGGATG GGTCAGGGGA TTCATTTATT CTGGCACTAG TCCGGGGTTT GCGTTTTGTA 
CTGGAAGAGA TACAGCTGTT AAAACAAGAA ATAAGCAAGG CAAGGATTAG AATGTTGGAG 
CCGATTCTCA AGGGACCTGC AGCTTTTGAT TATTTAAGGA AAGCTTTCAC CAAGCGTTAT 
GGTCTTCCTT CCGTCGCTAT GACTGCCTTA CCCTTAACAT GGAAGTGGCT TTTATCTGTT 
AAAGATTCCA TGAACCAGGA ATTGAATGAA CACAAGGAGG CTCTATCGGG CCTGACAAGT 
GGACAGGATC GTTTCCTTCC TTCTTCCGCC CTTAGAACTG GAGGAAGCTT TTCAGTTAAA 
ATGAATAAAA ACCATTCTTC ACCTTCGACC ACTACAGAAG GTGTAGATGA ATGCACGGGG 
GAGAAAGTTG ATTTATTGGT GAGGCTGGGC TTATTAAAGT TGGTAAATGC TGTATCTGGC 
TTGACGCAGG AAGGGTTGCC TGAAACTATG CAGCTGAACT TCTTCAGACT AAGGGCTATT 
CAGGCAAAAA TCCAAAAGAT CGTCGTAATA GCAACCAGCA TTCTAGTCCA AAGACAGGTT 
CTTCAGAGTA TGCAAATGGT ATCAAGTGCA GCAGATATGG ATAAAATTGT TCAGGGGAGT 
GCCAAATCAC TTTCTGAGAT CCTAGACTCC AACAAAGATG CTGGTATTGA AGAGATCATA 
GAGACACTTG GCAAACCTTT AGAGCATGGC CACGATAGTA CTGATGTGAT GAAGCTTCAG 
CAGATCAAGG AGATCATGGC AAGGATGTTA TCCAAGAGCC TGCAAGCTGG GGATGCTATT 
TTTGTACACG TATCCCGCGC TATATATTTG GCTGGAAGGG GAGTTGTACT TGGGGGAACC 
GGAAGAAATG GAAAAGAATT GTCTGAAATG GCTCTGCGGC AGGTGGGAGC AATTGTTCTG 
ATTGACGAGA TTGTGGAAGC TGCCTCTGTA TTGGTTATGG CAGCACGCGT GACGGTGAAT 
GTTCATGGTC CTTGGTATGC ACAGTTAGTA GCTAAAACGT GA