LOC103851096 cDNA ORF clone, Brassica rapa(field mustard)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC103851096
Entrez Gene ID	103851096
Full Name	autophagy protein 5
Gene Type	protein-coding
Organism	Brassica rapa(field mustard)

mRNA and Protein(s)

mRNA	Protein	Name
XM_009127926.2	XP_009126174.1	autophagy protein 5

Pathways from BioSystems
Gene Ontology

The following LOC103851096 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC103851096 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OBr135640	XM_009127926.2 Latest version!	Brassica rapa autophagy protein 5 (LOC103851096), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC103851096 ( XM_009127926.2 ) cDNA ORF clone, Brassica rapa(field mustard) -> XP_009126174.1 Brassica rapa autophagy protein 5 (LOC103851096), mRNA.

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CloneID	OBr135640
Clone ID Related Accession (Same CDS sequence)	XM_009127926.2
Accession Version	XM_009127926.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1026bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-10-12
Organism	Brassica rapa(field mustard)
Product	autophagy protein 5
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024796.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Oct 13, 2016 this sequence version replaced XM_009127926.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Brassica rapa Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGGCGA ATGAAGAAGA AGCGGTGAAG TACGTATGGG AAGGAGCAAT TCCTCTGCAG 
ATTCATCTCC ACAAATCCGA AGTCGCTTCT CACCCTCCTC CTCCTCCTGC TCTCGTGTTG 
GCGCCAAGAA TAGGATACTT GCCTCTGTTA GTTCATCTTA TAAAGCCTTA CTTCAAGGAT 
TCACTGCCTC CTGGAGAAGA TTCCATCTGG TTTGACTACA AAGGATTGCC TCTGAAATGG 
TATATACCCA CAGGTGTTCT TTTTGATCTC CTATGTGCAG AACCAGAAAG ACCCTGGAAT 
CTCACTATAC ACTTTAGAGG ATATCCTAGC AACGTACTGA TACCATGTGA AGGAGAAGAT 
TCTATCAAGT GGAACTTTGT TAATTCTTTG AAGGAGGCGG CATATATTAT CAATGGAAAT 
TGCAAGAATG TTATGAATAT GTCTCAGAGT GACCAAGAAG ACCTGTGGAC TTCTGTCATG 
AACGGTGATC TTGACACCTA CACAAGATTA TCACCCAAGA TTAAAATGGG AAATATCGAA 
GATGAGTTTT CAAGAAAAGC AAGTGTGTCA TCTCCGCAAT CTCGACAAGG TGGGACTGAG 
ATAGATGTGG CTGGACAAGT TAAGACAGCA AGGGTTCCTG TTCGGTTGTA TGTTCGAAGT 
GTAAGTAAAG ATTTCGAGAA TCTTGAAGAT GTACCTGAGA TGGATACATG GGATGAGATC 
TCGTACCTAA ATCGCCCTGT TCAGTTCCTC AGAAAAGAAG GGAAATGCTT TACTTTGCGC 
GATGCAATTG AAAGTCTCCT CCCGGAGTAC ATTAGAGACA GAGCTCAAAG GAGTGGAGAA 
GAGGGGGAAC AAAGAACCAC GGATGCATCA GATGTCTCGC AGGAGACGAG GGGAGAACTC 
AAATTGGTAA GGATCCAAGG GATTGAGATG AAACTAGAGA TACCGTTCTC TTGGGTGGTA 
AATAACTTGA TGAACCCAGA GTTCTATCTC CATATCTCTG TTCTTGTTAA AGAACCTCAA 
AGGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009126174.1
CDS	39..1064
Translation	MAANEEEAVKYVWEGAIPLQIHLHKSEVASHPPPPPALVLAPRIGYLPLLVHLIKPYFKDSLPPGEDSIWFDYKGLPLKWYIPTGVLFDLLCAEPERPWNLTIHFRGYPSNVLIPCEGEDSIKWNFVNSLKEAAYIINGNCKNVMNMSQSDQEDLWTSVMNGDLDTYTRLSPKIKMGNIEDEFSRKASVSSPQSRQGGTEIDVAGQVKTARVPVRLYVRSVSKDFENLEDVPEMDTWDEISYLNRPVQFLRKEGKCFTLRDAIESLLPEYIRDRAQRSGEEGEQRTTDASDVSQETRGELKLVRIQGIEMKLEIPFSWVVNNLMNPEFYLHISVLVKEPQR

Target ORF information:

RefSeq Version	XM_009127926.2
Organism	Brassica rapa(field mustard)
Definition	Brassica rapa autophagy protein 5 (LOC103851096), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009127926.2

ORF Insert Sequence:

ATGGCGGCGA ATGAAGAAGA AGCGGTGAAG TACGTATGGG AAGGAGCAAT TCCTCTGCAG 
ATTCATCTCC ACAAATCCGA AGTCGCTTCT CACCCTCCTC CTCCTCCTGC TCTCGTGTTG 
GCGCCAAGAA TAGGATACTT GCCTCTGTTA GTTCATCTTA TAAAGCCTTA CTTCAAGGAT 
TCACTGCCTC CTGGAGAAGA TTCCATCTGG TTTGACTACA AAGGATTGCC TCTGAAATGG 
TATATACCCA CAGGTGTTCT TTTTGATCTC CTATGTGCAG AACCAGAAAG ACCCTGGAAT 
CTCACTATAC ACTTTAGAGG ATATCCTAGC AACGTACTGA TACCATGTGA AGGAGAAGAT 
TCTATCAAGT GGAACTTTGT TAATTCTTTG AAGGAGGCGG CATATATTAT CAATGGAAAT 
TGCAAGAATG TTATGAATAT GTCTCAGAGT GACCAAGAAG ACCTGTGGAC TTCTGTCATG 
AACGGTGATC TTGACACCTA CACAAGATTA TCACCCAAGA TTAAAATGGG AAATATCGAA 
GATGAGTTTT CAAGAAAAGC AAGTGTGTCA TCTCCGCAAT CTCGACAAGG TGGGACTGAG 
ATAGATGTGG CTGGACAAGT TAAGACAGCA AGGGTTCCTG TTCGGTTGTA TGTTCGAAGT 
GTAAGTAAAG ATTTCGAGAA TCTTGAAGAT GTACCTGAGA TGGATACATG GGATGAGATC 
TCGTACCTAA ATCGCCCTGT TCAGTTCCTC AGAAAAGAAG GGAAATGCTT TACTTTGCGC 
GATGCAATTG AAAGTCTCCT CCCGGAGTAC ATTAGAGACA GAGCTCAAAG GAGTGGAGAA 
GAGGGGGAAC AAAGAACCAC GGATGCATCA GATGTCTCGC AGGAGACGAG GGGAGAACTC 
AAATTGGTAA GGATCCAAGG GATTGAGATG AAACTAGAGA TACCGTTCTC TTGGGTGGTA 
AATAACTTGA TGAACCCAGA GTTCTATCTC CATATCTCTG TTCTTGTTAA AGAACCTCAA 
AGGTAG