| Gene Symbol | PODN |
| Entrez Gene ID | 509606 |
| Full Name | podocan |
| General protein information |
|
| Gene Type | protein-coding |
| Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » PODN cDNA ORF clone
| Gene Symbol | PODN |
| Entrez Gene ID | 509606 |
| Full Name | podocan |
| General protein information |
|
| Gene Type | protein-coding |
| Organism | Bos taurus(cattle) |
| mRNA | Protein | Name |
|---|---|---|
| XM_015465392.1 | XP_015320878.1 | podocan isoform X1 |
| XM_005204538.3 | XP_005204595.1 | podocan isoform X2 |
| NM_001192227.1 | NP_001179156.1 | podocan |
| XM_024987111.1 | XP_024842879.1 | podocan isoform X1 |
| XM_024987118.1 | XP_024842886.1 | podocan isoform X1 |
| XM_005204538.4 | XP_005204595.1 | podocan isoform X1 |
| Mus musculus (house mouse) | Podn | NP_766462.2 |
| Gallus gallus (chicken) | PODN | XP_004936858.1 |
| Pan troglodytes (chimpanzee) | PODN | XP_003308152.1 |
| Canis lupus familiaris (dog) | PODN | XP_005620335.1 |
| Bos taurus (cattle) | PODN | NP_001179156.1 |
| Rattus norvegicus (Norway rat) | LOC102552895 | XP_006238637.1 |
| Danio rerio (zebrafish) | podn | XP_003201285.2 |
| Homo sapiens (human) | PODN | NP_714914.2 |
| Xenopus tropicalis (tropical clawed frog) | podn | XP_004914069.1 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PODN gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PODN cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OBa40141 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001192227.1 | |
| Accession Version | NM_001192227.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1986bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2018-05-29 | |
| Organism | Bos taurus(cattle) | |
| Product | podocan | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from NKLS02000003.1. On Jul 17, 2010 this sequence version replaced XM_586607.4. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMN03145412, SAMN03145413 [ECO:0000350] ##Evidence-Data-END## | |
1 | ATGGAAGGAG CCCACGCCCG CGGAGCGCAG CCGAGACTCG GGAGAAAACT GAGGCCTGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001179156.1 |
| CDS | 1..1986 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001192227.1 |
1 | ATGGAAGGAG CCCACGCCCG CGGAGCGCAG CCGAGACTCG GGAGAAAACT GAGGCCTGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OBa17910 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005204538.3 , XM_024987111.1 , XM_024987118.1 , XM_005204538.4 | |
| Accession Version | XM_005204538.3 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1836bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-01-25 | |
| Organism | Bos taurus(cattle) | |
| Product | podocan isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003103873.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005204538.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCCCAGG GCTGGGCGCT GCTGCTCCTG CTGCTATTGC CGCGGCAGCT GGGAGTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005204595.1 |
| CDS | 92..1927 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005204538.3 |
1 | ATGGCCCAGG GCTGGGCGCT GCTGCTCCTG CTGCTATTGC CGCGGCAGCT GGGAGTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OBa17910 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005204538.3 , XM_024987111.1 , XM_024987118.1 , XM_005204538.4 | |
| Accession Version | XM_024987111.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1836bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2018-05-06 | |
| Organism | Bos taurus(cattle) | |
| Product | podocan isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCCCAGG GCTGGGCGCT GCTGCTCCTG CTGCTATTGC CGCGGCAGCT GGGAGTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_024842879.1 |
| CDS | 184..2019 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_024987111.1 |
1 | ATGGCCCAGG GCTGGGCGCT GCTGCTCCTG CTGCTATTGC CGCGGCAGCT GGGAGTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OBa17910 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005204538.3 , XM_024987111.1 , XM_024987118.1 , XM_005204538.4 | |
| Accession Version | XM_024987118.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1836bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2018-05-06 | |
| Organism | Bos taurus(cattle) | |
| Product | podocan isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCCCAGG GCTGGGCGCT GCTGCTCCTG CTGCTATTGC CGCGGCAGCT GGGAGTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_024842886.1 |
| CDS | 28..1863 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_024987118.1 |
1 | ATGGCCCAGG GCTGGGCGCT GCTGCTCCTG CTGCTATTGC CGCGGCAGCT GGGAGTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OBa17910 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005204538.3 , XM_024987111.1 , XM_024987118.1 , XM_005204538.4 | |
| Accession Version | XM_005204538.4 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1836bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2018-05-06 | |
| Organism | Bos taurus(cattle) | |
| Product | podocan isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005204538.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCCCAGG GCTGGGCGCT GCTGCTCCTG CTGCTATTGC CGCGGCAGCT GGGAGTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005204595.1 |
| CDS | 333..2168 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005204538.4 |
1 | ATGGCCCAGG GCTGGGCGCT GCTGCTCCTG CTGCTATTGC CGCGGCAGCT GGGAGTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OBa90467 | |
| Clone ID Related Accession (Same CDS sequence) | XM_015465392.1 | |
| Accession Version | XM_015465392.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2019bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-01-25 | |
| Organism | Bos taurus(cattle) | |
| Product | podocan isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003103873.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCCCGTGA GTATGCCCGT GTCTTTCCAC GTCAGATCAT CCCAGGTAGC CCACTCTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_015320878.1 |
| CDS | 37..2055 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_015465392.1 |
1 | ATGCCCGTGA GTATGCCCGT GTCTTTCCAC GTCAGATCAT CCCAGGTAGC CCACTCTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |