OPN1SW cDNA ORF clone, Balaenoptera acutorostrata scammoni

Gene
Clones
gRNAs

Summary

Gene Symbol	OPN1SW
Entrez Gene ID	103002010
Full Name	opsin 1, short wave sensitive
Gene Type	protein-coding
Organism	Balaenoptera acutorostrata scammoni

mRNA and Protein(s)

mRNA	Protein	Name
XM_007177192.2	XP_007177254.2	LOW QUALITY PROTEIN: short-wave-sensitive opsin 1
XM_007177192.1	XP_007177254.1	LOW QUALITY PROTEIN: short-wave-sensitive opsin 1

Pathways from BioSystems
Gene Ontology

The following OPN1SW gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the OPN1SW cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OBa157593	XM_007177192.1 Latest version!	Balaenoptera acutorostrata scammoni opsin 1 (cone pigments), short-wave-sensitive (OPN1SW), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OBa241893	XM_007177192.2 Latest version!	Balaenoptera acutorostrata scammoni opsin 1, short wave sensitive (OPN1SW), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

OPN1SW ( XM_007177192.1 ) cDNA ORF clone, Balaenoptera acutorostrata scammoni -> XP_007177254.1 Balaenoptera acutorostrata scammoni opsin 1 (cone pigments), short-wave-sensitive (OPN1SW), mRNA.

Price & Availability↑

CloneID	OBa157593
Clone ID Related Accession (Same CDS sequence)	XM_007177192.1
Accession Version	XM_007177192.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1047bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2014-03-16
Organism	Balaenoptera acutorostrata scammoni
Product	LOW QUALITY PROTEIN: short-wave-sensitive opsin 1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006726354.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Balaenoptera acutorostrata scammoni Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 5.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAGCAAGA TGTCAGAGGA GGAGGAGTTT TTTCTGTTCA AGAACATCTC CTTGGTGGGG 
CCGTGGGATG GGCCTCAGTA CCACCTCACC CTTGTCTGGG CCTTCCACCT CCAGGCAGCC 
TTCACGGGCT TTGTCTTCTT TGTAGGGATG CCACTCAATG CCACAGTGCT GGTGGCCACA 
CTGCGCTACA GAAAGTTGCG GCAGCCACTC AACTATATTC TGGTCAATGT ATCTCTGGGG 
GGCTTCATCT ACTCCATCTT CNTCTTTGTC GTCTTCATCA CCAGCTGTCA TGAATACTTT 
GTCTTCGGCA GCCATGTTTG TGCTCTGGAG GCCTTCCTGG GCTGTACAGC AGGTCTGGTG 
ACAGGCTGGT CCCTGGCCTT CTTGGCCTTT GAGCGCTACA TCATCATCTG TAAGCCCTTC 
AGCAACTTCC ACTTCAGCTC CAAGCATGCA CTGACGGTGG TCCTGGCCAC CTGGACCATT 
GGTATTGGTG TCTCCGTCCC ACCCTTCTTT GGCTGGAGCC GGTTCGTCCC CGAGGGTCTT 
CAGTGTTCCT GCAGTCCCGA CTGGTACACC GTGGGCACCA AATATTACAG CGAGTACTAT 
ACCTGGTTCC TCTTCATTTT CTGCTACATT GTGCCTCTCT CCCTCATCTG CTTCTCCTAC 
TCTCAGCTGC TGGGGGTCTT CAGAGCTGTT GCAGCTCAGC AGCAGGAGTC AGCTACAACC 
CAGAAAGCTG AGCGGGAGGT GAGCCACACG GTGGTGATGA TGGTGGGATC CTTCTGTCTC 
TGTTGCACGC CCTATGCTGC CCTGGCCATG TATATAGTCA ACAACCGTAA CCATGGGGTG 
GACTTACGGT TTGTCACCAT TCCTGCCTTC TTCTCCAAGA GTGCTTGTGT CTACAATCCC 
ATCATCTACT GCTTCATGAA TAAGCAGTTC CGAGCTTGCA TCATGGAGAT GGTGTGTAGA 
AAGCCCATGA CAGATGAGTC CGACATGTCT AGCTCCCAGA AAATGGAAGT TTCTACCGTC 
TCTTCTAGCC AAGTTGGCCC CAACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_007177254.1
CDS	1..1047
Translation	MSKMSEEEEFFLFKNISLVGPWDGPQYHLTLVWAFHLQAAFTGFVFFVGMPLNATVLVATLRYRKLRQPLNYILVNVSLGGFIYSIFnullFVVFITSCHEYFVFGSHVCALEAFLGCTAGLVTGWSLAFLAFERYIIICKPFSNFHFSSKHALTVVLATWTIGIGVSVPPFFGWSRFVPEGLQCSCSPDWYTVGTKYYSEYYTWFLFIFCYIVPLSLICFSYSQLLGVFRAVAAQQQESATTQKAEREVSHTVVMMVGSFCLCCTPYAALAMYIVNNRNHGVDLRFVTIPAFFSKSACVYNPIIYCFMNKQFRACIMEMVCRKPMTDESDMSSSQKMEVSTVSSSQVGPN

Target ORF information:

RefSeq Version	XM_007177192.1
Organism	Balaenoptera acutorostrata scammoni
Definition	Balaenoptera acutorostrata scammoni opsin 1 (cone pigments), short-wave-sensitive (OPN1SW), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_007177192.1

ORF Insert Sequence:

ATGAGCAAGA TGTCAGAGGA GGAGGAGTTT TTTCTGTTCA AGAACATCTC CTTGGTGGGG 
CCGTGGGATG GGCCTCAGTA CCACCTCACC CTTGTCTGGG CCTTCCACCT CCAGGCAGCC 
TTCACGGGCT TTGTCTTCTT TGTAGGGATG CCACTCAATG CCACAGTGCT GGTGGCCACA 
CTGCGCTACA GAAAGTTGCG GCAGCCACTC AACTATATTC TGGTCAATGT ATCTCTGGGG 
GGCTTCATCT ACTCCATCTT CNTCTTTGTC GTCTTCATCA CCAGCTGTCA TGAATACTTT 
GTCTTCGGCA GCCATGTTTG TGCTCTGGAG GCCTTCCTGG GCTGTACAGC AGGTCTGGTG 
ACAGGCTGGT CCCTGGCCTT CTTGGCCTTT GAGCGCTACA TCATCATCTG TAAGCCCTTC 
AGCAACTTCC ACTTCAGCTC CAAGCATGCA CTGACGGTGG TCCTGGCCAC CTGGACCATT 
GGTATTGGTG TCTCCGTCCC ACCCTTCTTT GGCTGGAGCC GGTTCGTCCC CGAGGGTCTT 
CAGTGTTCCT GCAGTCCCGA CTGGTACACC GTGGGCACCA AATATTACAG CGAGTACTAT 
ACCTGGTTCC TCTTCATTTT CTGCTACATT GTGCCTCTCT CCCTCATCTG CTTCTCCTAC 
TCTCAGCTGC TGGGGGTCTT CAGAGCTGTT GCAGCTCAGC AGCAGGAGTC AGCTACAACC 
CAGAAAGCTG AGCGGGAGGT GAGCCACACG GTGGTGATGA TGGTGGGATC CTTCTGTCTC 
TGTTGCACGC CCTATGCTGC CCTGGCCATG TATATAGTCA ACAACCGTAA CCATGGGGTG 
GACTTACGGT TTGTCACCAT TCCTGCCTTC TTCTCCAAGA GTGCTTGTGT CTACAATCCC 
ATCATCTACT GCTTCATGAA TAAGCAGTTC CGAGCTTGCA TCATGGAGAT GGTGTGTAGA 
AAGCCCATGA CAGATGAGTC CGACATGTCT AGCTCCCAGA AAATGGAAGT TTCTACCGTC 
TCTTCTAGCC AAGTTGGCCC CAACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

OPN1SW ( XM_007177192.2 ) cDNA ORF clone, Balaenoptera acutorostrata scammoni -> XP_007177254.2 Balaenoptera acutorostrata scammoni opsin 1, short wave sensitive (OPN1SW), mRNA.

Price & Availability↑

CloneID	OBa241893
Clone ID Related Accession (Same CDS sequence)	XM_007177192.2
Accession Version	XM_007177192.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1047bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-02-11
Organism	Balaenoptera acutorostrata scammoni
Product	LOW QUALITY PROTEIN: short-wave-sensitive opsin 1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006726354.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Feb 12, 2019 this sequence version replaced XM_007177192.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Balaenoptera acutorostrata scammoni Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel ##RefSeq-Attributes-END##

ATGAGCAAGA TGTCAGAGGA GGAGGAGTTT TTTCTGTTCA AGAACATCTC CTTGGTGGGG 
CCGTGGGATG GGCCTCAGTA CCACCTCACC CTTGTCTGGG CCTTCCACCT CCAGGCAGCC 
TTCACGGGCT TTGTCTTCTT TGTAGGGATG CCACTCAATG CCACAGTGCT GGTGGCCACA 
CTGCGCTACA GAAAGTTGCG GCAGCCACTC AACTATATTC TGGTCAATGT ATCTCTGGGG 
GGCTTCATCT ACTCCATCTT CTCTTTGNTC GTCTTCATCA CCAGCTGTCA TGAATACTTT 
GTCTTCGGCA GCCATGTTTG TGCTCTGGAG GCCTTCCTGG GCTGTACAGC AGGTCTGGTG 
ACAGGCTGGT CCCTGGCCTT CTTGGCCTTT GAGCGCTACA TCATCATCTG TAAGCCCTTC 
AGCAACTTCC ACTTCAGCTC CAAGCATGCA CTGACGGTGG TCCTGGCCAC CTGGACCATT 
GGTATTGGTG TCTCCGTCCC ACCCTTCTTT GGCTGGAGCC GGTTCGTCCC CGAGGGTCTT 
CAGTGTTCCT GCAGTCCCGA CTGGTACACC GTGGGCACCA AATATTACAG CGAGTACTAT 
ACCTGGTTCC TCTTCATTTT CTGCTACATT GTGCCTCTCT CCCTCATCTG CTTCTCCTAC 
TCTCAGCTGC TGGGGGTCTT CAGAGCTGTT GCAGCTCAGC AGCAGGAGTC AGCTACAACC 
CAGAAAGCTG AGCGGGAGGT GAGCCACACG GTGGTGATGA TGGTGGGATC CTTCTGTCTC 
TGTTGCACGC CCTATGCTGC CCTGGCCATG TATATAGTCA ACAACCGTAA CCATGGGGTG 
GACTTACGGT TTGTCACCAT TCCTGCCTTC TTCTCCAAGA GTGCTTGTGT CTACAATCCC 
ATCATCTACT GCTTCATGAA TAAGCAGTTC CGAGCTTGCA TCATGGAGAT GGTGTGTAGA 
AAGCCCATGA CAGATGAGTC CGACATGTCT AGCTCCCAGA AAATGGAAGT TTCTACCGTC 
TCTTCTAGCC AAGTTGGCCC CAACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_007177254.2
CDS	1..1047
Translation	MSKMSEEEEFFLFKNISLVGPWDGPQYHLTLVWAFHLQAAFTGFVFFVGMPLNATVLVATLRYRKLRQPLNYILVNVSLGGFIYSIFSLnullVFITSCHEYFVFGSHVCALEAFLGCTAGLVTGWSLAFLAFERYIIICKPFSNFHFSSKHALTVVLATWTIGIGVSVPPFFGWSRFVPEGLQCSCSPDWYTVGTKYYSEYYTWFLFIFCYIVPLSLICFSYSQLLGVFRAVAAQQQESATTQKAEREVSHTVVMMVGSFCLCCTPYAALAMYIVNNRNHGVDLRFVTIPAFFSKSACVYNPIIYCFMNKQFRACIMEMVCRKPMTDESDMSSSQKMEVSTVSSSQVGPN

Target ORF information:

RefSeq Version	XM_007177192.2
Organism	Balaenoptera acutorostrata scammoni
Definition	Balaenoptera acutorostrata scammoni opsin 1, short wave sensitive (OPN1SW), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_007177192.2

ORF Insert Sequence:

ATGAGCAAGA TGTCAGAGGA GGAGGAGTTT TTTCTGTTCA AGAACATCTC CTTGGTGGGG 
CCGTGGGATG GGCCTCAGTA CCACCTCACC CTTGTCTGGG CCTTCCACCT CCAGGCAGCC 
TTCACGGGCT TTGTCTTCTT TGTAGGGATG CCACTCAATG CCACAGTGCT GGTGGCCACA 
CTGCGCTACA GAAAGTTGCG GCAGCCACTC AACTATATTC TGGTCAATGT ATCTCTGGGG 
GGCTTCATCT ACTCCATCTT CTCTTTGNTC GTCTTCATCA CCAGCTGTCA TGAATACTTT 
GTCTTCGGCA GCCATGTTTG TGCTCTGGAG GCCTTCCTGG GCTGTACAGC AGGTCTGGTG 
ACAGGCTGGT CCCTGGCCTT CTTGGCCTTT GAGCGCTACA TCATCATCTG TAAGCCCTTC 
AGCAACTTCC ACTTCAGCTC CAAGCATGCA CTGACGGTGG TCCTGGCCAC CTGGACCATT 
GGTATTGGTG TCTCCGTCCC ACCCTTCTTT GGCTGGAGCC GGTTCGTCCC CGAGGGTCTT 
CAGTGTTCCT GCAGTCCCGA CTGGTACACC GTGGGCACCA AATATTACAG CGAGTACTAT 
ACCTGGTTCC TCTTCATTTT CTGCTACATT GTGCCTCTCT CCCTCATCTG CTTCTCCTAC 
TCTCAGCTGC TGGGGGTCTT CAGAGCTGTT GCAGCTCAGC AGCAGGAGTC AGCTACAACC 
CAGAAAGCTG AGCGGGAGGT GAGCCACACG GTGGTGATGA TGGTGGGATC CTTCTGTCTC 
TGTTGCACGC CCTATGCTGC CCTGGCCATG TATATAGTCA ACAACCGTAA CCATGGGGTG 
GACTTACGGT TTGTCACCAT TCCTGCCTTC TTCTCCAAGA GTGCTTGTGT CTACAATCCC 
ATCATCTACT GCTTCATGAA TAAGCAGTTC CGAGCTTGCA TCATGGAGAT GGTGTGTAGA 
AAGCCCATGA CAGATGAGTC CGACATGTCT AGCTCCCAGA AAATGGAAGT TTCTACCGTC 
TCTTCTAGCC AAGTTGGCCC CAACTAA