LOC108690318 cDNA ORF clone, Atta colombica

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC108690318
Entrez Gene ID	108690318
Full Name	chaoptin
Gene Type	protein-coding
Organism	Atta colombica

mRNA and Protein(s)

mRNA	Protein	Name
XM_018197547.1	XP_018053036.1	chaoptin

Pathways from BioSystems
Gene Ontology

The following LOC108690318 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC108690318 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAt88687	XM_018197547.1 Latest version!	Atta colombica chaoptin (LOC108690318), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$713.30 $1019.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC108690318 ( XM_018197547.1 ) cDNA ORF clone, Atta colombica -> XP_018053036.1 Atta colombica chaoptin (LOC108690318), mRNA.

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CloneID	OAt88687
Clone ID Related Accession (Same CDS sequence)	XM_018197547.1
Accession Version	XM_018197547.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3855bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-09-18
Organism	Atta colombica
Product	chaoptin
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017259417.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Atta colombica Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAAGCTTT TTACTTTGGT GAAGATCGCG TACGCTATGC TGGTGATCAC CCTGTTGCTA 
ATGATGTGGG CGTCCATGGC GCGGATGCAC GAACTACCGG TCCACTATCC ATCGTGTTTC 
TTTAATCCGC TTTGTACTTG TTCGAAAGCC ATGCCGGATC TTGGCAAAGT AGCATGCTAC 
AGTGTACCGA TGCCACGAAT ACCGCAGCCG ATTAATTCAT CTAAAATGTA TATGCTGCAA 
CTGGAGAACA ATGGGCTGAG GGTTCTACAG CCACAGTATC TTATGAATAC TGGTCTCTAT 
CAACTACAGA TTAAGCATAA TCCTCTGTCG GATATTCCAG AAGAAGCCTT TCTAGGTCTT 
GAGAGATCAT TATCGATGCT CGACTTGTCC TACAATCAAC TTGCAAGCAT ACCGAGCAAA 
TCATTTAAAC ATTTACAAAA ACTGGAAGTT CTCGAACTCA CAGGCAACAA GATATCTCGC 
ATTGTGCCGG AAAATTGGCG TGGTTTAGAG AACTCTTTGC AAATTCTACG TTTGGGAAAA 
AACGCGATTG AGAAATTGCC AGCCGATGCC TTCGTTAGTC TCACATATTT AGAGATCCTT 
GATCTTCGAG AAAATAGTTT GAAAGAGATC GATCCTTCGG TATTCAGGGA TGGGATGGCT 
CACCTGACAC ATCTTTATTT GAATGACAAT CAACTGACAT ATGTGCCGTA TATCCAATTG 
TTTTCATTGA AACGTATGAA GGTCCTTGAT CTCAGTTATA ACAAAATATC GAAAATGCTG 
CATGTTCAAC AAGAACCGGA GATCAGGAGT ATACAGATGT CTCTGGATGT ATTGCAACTA 
GATTATAATC AAATCGAAAC TCTCGCATCC GGTGATTTTC AACATTTTTA CAAGGTCAAT 
CACACATATC TTAGAGGCAA CCCTTTGATG ACTATCGAGG AGGGTACATT CAAAGATTCG 
CGCATTCGTG AGTTATATCT GAGCGATTGC GATTTGCTGG AGATCAACTC GGCCAACTTA 
GTCGGCTTGG AATCGTCGCT CGAGTTATTG GACGTGTCAG GAAATAATAT AACTATGCTT 
CCTAATCATC TATTTCAAGA ATTCGATCTT CTGCGTACGC TTATCTTCCG CGAGAATCGT 
ATCAACACAT TTTCGCCAAC TGAAGTTTTT AGTGGCTTCC AATATTTGTA TAATTTGGAC 
CTCAGTGGCA AGCAGAACAG CATGATTTCC CTTCAAGACC TACGACAAAT GAGAAATTTG 
CGTTTCCTCT CGATCTCCCG AATGCCACAG GCAATCTTAT CAGCGAATGA TTTTCTAGAA 
TTTGGTATGG ATATCAAAGA ATTACGAATA ATTAATAGTA ATCTGAATAC GATAAAAAAT 
CACGCTTTCA TGCACGTTCG CGGAATCAAA TATCTTGATT TTTCTGAAAA CTCGATATCG 
ACTATAGATG ATGATGCTTT CTCAGAGGTG GGCTATTCTC TTTTAACATT AAGGATGTCT 
CATGGTCTCT CCTCCTCAAT TTCTGAAATA CCAAATCGGC CATTTAAATC GTTAACAAAT 
TTACAGCATC TTGACCTTAG CAATAACAAG ATACGATCTT TATCTGCTAC ATCTTTTCAT 
TTTTTAAAAA GGATAAAACG CATTGAGCTT CAAGATAACG AAATTGATAG CATACTGAAG 
GGTACCTTTC AGGGTGACAT CCATTCAACT CTGGAAGAAA TCAACTTCGC TTTTAATCAA 
GTGAGAGATT TGCAAACTCA TACATTCATC GATTTGTCGG CTTTAATGAC AATTAATCTG 
GAGGATAATA CTATCGAGAG GATCGAAAAA CGAGCCTTTA TAAATATGAA CCGACTTAAA 
TATATCAATT TGCGCGGCAA TAAGATTAGA GACATCACCG ATGAAGCCTT TCAAAATTTA 
CCAGATCTTG AGTTTCTTGA TCTCGCATAT AACAATCTTA ATGAATTTGA CTTCGCCTCA 
TTCGATCAAG TGGGTACATT ATCATCATTC AAAGTCAACG TTAGCCATAA TGAAATTTCA 
AGATTATGGG TAAATAGCAC CTCTTTCATA TCTTCATCTG GCGTTAGTGG TAATGTGCAA 
TCGAACATCA AAGTTCTGGA TTTGAGTTAC AATAATATCT CCGATATTAC GAAGTATTAC 
TTCAAGCCGG TCGAGTATTC ACTCACTCAT CTGTATCTGT CAAACAATCA ATTAAGAAAC 
ATCACTCAGG ATGTCTTTGG CAATATGCCT CACTTGCAAT GGCTCGACTT GAGACATAAC 
GGGTTGATAG AGATATATTT TGATTGTTTG AAGAATACAA ATAACTTGCA AGTGTTATTT 
TTCTCTTGGA ACGAAATCAC AGACATCCCA GCGGAGACTC TAAGATCCTT GAAGAAATTG 
CGCATCGTGG ATTTGTCTCA TAACAAGCTG AGAACACTGC CAGATAACAT GTTTACTGAC 
TCTGATATAG AGAGTCTTGA TCTCTCGCAC AATCAATTCA CGAGACTGCC CGTTAAAAGT 
ATGTCGGTAA CTTCCACTGC AAATTTAGCA AATTTGGATA TGTCCTGGAA CATACTATCG 
GGGATTCATA CCACCGACAC AATATTCAGA CTTAGAGGTC TTGTGTGGTT AGATCTATCG 
TATAATCGAC TTGTTAGATT AGACGACGGC GTATTTTCTG ATTTACCATA TCTAGCTCAT 
CTTGACTTAA GCCACAATAA ACAACTTATT TTGGAAAGCC GCGGAAGGAC GTTCTATGGT 
TTAGAGGACA CACTTCTGTA TCTTGGTCTG AGCAATATTT CTCTCTTAAG TATTCCAGAG 
TTGCCTCTAA GACGATTGCA AACTTTAAAT CTGGCACATA ATGGATTGGC ATCGATTTCC 
CCGGAAATGT CGTCCAATCT TACATCTCTT CATTATTTAG ATTTAAGTTA TAATGATTTA 
ACGGTGGTAC CATTGATTAC TCACACATTA CCAGAATTAA AAACCTTCAA TTTGGCAAAC 
AATCCCATTA CTGCTATTAC AAATACTAGT TTTCTTGGTG TGGCTGATAG TCTCGAAGAG 
CTTGATATAC GAAAACTCAG TCTGTCAAGC TTTGAAGCAG GAGCACTTTG CAAAGCTACC 
AAACTCCGCA AATTACACAT TACTGCGTAC AATATAAAGA ATTTCAACTT TCCCAACATC 
CTAGAATATA ACCATGGTTT AAAACATTTG CTCATTGATA TTCAAAATGA CACCAATCTA 
GAGAAAGAAA TGAGAGGGAA ATTGCCTTAT AAATTATACA AAATTACGTT GACTGGTAAA 
GCTTTAAAGA CTATACATCC AGAGATACTA CACGGTATGC GAAATCCCCA TCTTCACTTC 
AATTTATACA ATACCAGCGT GGCAATTGTG CCGCGAGAAA TATTTAGAAA CGCACAGCGT 
GTGCGTAATG TAACTGTAGA AATTCGCAAT AGCGATATAC GATCATTGCA TAATCCATCA 
TCCAGTTACA AACCGGGAGT ACCAGGCCAG CGATTCCTTA TGAAACTTCG ATTAGCGAAT 
AGTCATGTCA ATTGCGATTG CGATATTGGC TGGATAGAAA TATGGCAAAG GAAGCACAGA 
CAATATCAAG AGGACCAATG TATTTCTTAC GACGAATTCC ATAATTTCGA GCGAGAGGAG 
AGCGATGAAT TTAATTGTTG GGACAATGGT TGGGATGACG ATATCCGCGA AACGTTCTGT 
CTGAACAAAA ACAACGTATC GTTGTCAAAT TTGTTAAAAA TGGAGCTAGA ATGTGGATGG 
GCCACGGCAA ACATTATCGA GCTGAACACT ATTTTCTTGG TGTTTTCAGT CATTTTAGCT 
GCTGTTTTGT ATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_018053036.1
CDS	202..4056
Translation	MKLFTLVKIAYAMLVITLLLMMWASMARMHELPVHYPSCFFNPLCTCSKAMPDLGKVACYSVPMPRIPQPINSSKMYMLQLENNGLRVLQPQYLMNTGLYQLQIKHNPLSDIPEEAFLGLERSLSMLDLSYNQLASIPSKSFKHLQKLEVLELTGNKISRIVPENWRGLENSLQILRLGKNAIEKLPADAFVSLTYLEILDLRENSLKEIDPSVFRDGMAHLTHLYLNDNQLTYVPYIQLFSLKRMKVLDLSYNKISKMLHVQQEPEIRSIQMSLDVLQLDYNQIETLASGDFQHFYKVNHTYLRGNPLMTIEEGTFKDSRIRELYLSDCDLLEINSANLVGLESSLELLDVSGNNITMLPNHLFQEFDLLRTLIFRENRINTFSPTEVFSGFQYLYNLDLSGKQNSMISLQDLRQMRNLRFLSISRMPQAILSANDFLEFGMDIKELRIINSNLNTIKNHAFMHVRGIKYLDFSENSISTIDDDAFSEVGYSLLTLRMSHGLSSSISEIPNRPFKSLTNLQHLDLSNNKIRSLSATSFHFLKRIKRIELQDNEIDSILKGTFQGDIHSTLEEINFAFNQVRDLQTHTFIDLSALMTINLEDNTIERIEKRAFINMNRLKYINLRGNKIRDITDEAFQNLPDLEFLDLAYNNLNEFDFASFDQVGTLSSFKVNVSHNEISRLWVNSTSFISSSGVSGNVQSNIKVLDLSYNNISDITKYYFKPVEYSLTHLYLSNNQLRNITQDVFGNMPHLQWLDLRHNGLIEIYFDCLKNTNNLQVLFFSWNEITDIPAETLRSLKKLRIVDLSHNKLRTLPDNMFTDSDIESLDLSHNQFTRLPVKSMSVTSTANLANLDMSWNILSGIHTTDTIFRLRGLVWLDLSYNRLVRLDDGVFSDLPYLAHLDLSHNKQLILESRGRTFYGLEDTLLYLGLSNISLLSIPELPLRRLQTLNLAHNGLASISPEMSSNLTSLHYLDLSYNDLTVVPLITHTLPELKTFNLANNPITAITNTSFLGVADSLEELDIRKLSLSSFEAGALCKATKLRKLHITAYNIKNFNFPNILEYNHGLKHLLIDIQNDTNLEKEMRGKLPYKLYKITLTGKALKTIHPEILHGMRNPHLHFNLYNTSVAIVPREIFRNAQRVRNVTVEIRNSDIRSLHNPSSSYKPGVPGQRFLMKLRLANSHVNCDCDIGWIEIWQRKHRQYQEDQCISYDEFHNFEREESDEFNCWDNGWDDDIRETFCLNKNNVSLSNLLKMELECGWATANIIELNTIFLVFSVILAAVLY

Target ORF information:

RefSeq Version	XM_018197547.1
Organism	Atta colombica
Definition	Atta colombica chaoptin (LOC108690318), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_018197547.1

ORF Insert Sequence:

ATGAAGCTTT TTACTTTGGT GAAGATCGCG TACGCTATGC TGGTGATCAC CCTGTTGCTA 
ATGATGTGGG CGTCCATGGC GCGGATGCAC GAACTACCGG TCCACTATCC ATCGTGTTTC 
TTTAATCCGC TTTGTACTTG TTCGAAAGCC ATGCCGGATC TTGGCAAAGT AGCATGCTAC 
AGTGTACCGA TGCCACGAAT ACCGCAGCCG ATTAATTCAT CTAAAATGTA TATGCTGCAA 
CTGGAGAACA ATGGGCTGAG GGTTCTACAG CCACAGTATC TTATGAATAC TGGTCTCTAT 
CAACTACAGA TTAAGCATAA TCCTCTGTCG GATATTCCAG AAGAAGCCTT TCTAGGTCTT 
GAGAGATCAT TATCGATGCT CGACTTGTCC TACAATCAAC TTGCAAGCAT ACCGAGCAAA 
TCATTTAAAC ATTTACAAAA ACTGGAAGTT CTCGAACTCA CAGGCAACAA GATATCTCGC 
ATTGTGCCGG AAAATTGGCG TGGTTTAGAG AACTCTTTGC AAATTCTACG TTTGGGAAAA 
AACGCGATTG AGAAATTGCC AGCCGATGCC TTCGTTAGTC TCACATATTT AGAGATCCTT 
GATCTTCGAG AAAATAGTTT GAAAGAGATC GATCCTTCGG TATTCAGGGA TGGGATGGCT 
CACCTGACAC ATCTTTATTT GAATGACAAT CAACTGACAT ATGTGCCGTA TATCCAATTG 
TTTTCATTGA AACGTATGAA GGTCCTTGAT CTCAGTTATA ACAAAATATC GAAAATGCTG 
CATGTTCAAC AAGAACCGGA GATCAGGAGT ATACAGATGT CTCTGGATGT ATTGCAACTA 
GATTATAATC AAATCGAAAC TCTCGCATCC GGTGATTTTC AACATTTTTA CAAGGTCAAT 
CACACATATC TTAGAGGCAA CCCTTTGATG ACTATCGAGG AGGGTACATT CAAAGATTCG 
CGCATTCGTG AGTTATATCT GAGCGATTGC GATTTGCTGG AGATCAACTC GGCCAACTTA 
GTCGGCTTGG AATCGTCGCT CGAGTTATTG GACGTGTCAG GAAATAATAT AACTATGCTT 
CCTAATCATC TATTTCAAGA ATTCGATCTT CTGCGTACGC TTATCTTCCG CGAGAATCGT 
ATCAACACAT TTTCGCCAAC TGAAGTTTTT AGTGGCTTCC AATATTTGTA TAATTTGGAC 
CTCAGTGGCA AGCAGAACAG CATGATTTCC CTTCAAGACC TACGACAAAT GAGAAATTTG 
CGTTTCCTCT CGATCTCCCG AATGCCACAG GCAATCTTAT CAGCGAATGA TTTTCTAGAA 
TTTGGTATGG ATATCAAAGA ATTACGAATA ATTAATAGTA ATCTGAATAC GATAAAAAAT 
CACGCTTTCA TGCACGTTCG CGGAATCAAA TATCTTGATT TTTCTGAAAA CTCGATATCG 
ACTATAGATG ATGATGCTTT CTCAGAGGTG GGCTATTCTC TTTTAACATT AAGGATGTCT 
CATGGTCTCT CCTCCTCAAT TTCTGAAATA CCAAATCGGC CATTTAAATC GTTAACAAAT 
TTACAGCATC TTGACCTTAG CAATAACAAG ATACGATCTT TATCTGCTAC ATCTTTTCAT 
TTTTTAAAAA GGATAAAACG CATTGAGCTT CAAGATAACG AAATTGATAG CATACTGAAG 
GGTACCTTTC AGGGTGACAT CCATTCAACT CTGGAAGAAA TCAACTTCGC TTTTAATCAA 
GTGAGAGATT TGCAAACTCA TACATTCATC GATTTGTCGG CTTTAATGAC AATTAATCTG 
GAGGATAATA CTATCGAGAG GATCGAAAAA CGAGCCTTTA TAAATATGAA CCGACTTAAA 
TATATCAATT TGCGCGGCAA TAAGATTAGA GACATCACCG ATGAAGCCTT TCAAAATTTA 
CCAGATCTTG AGTTTCTTGA TCTCGCATAT AACAATCTTA ATGAATTTGA CTTCGCCTCA 
TTCGATCAAG TGGGTACATT ATCATCATTC AAAGTCAACG TTAGCCATAA TGAAATTTCA 
AGATTATGGG TAAATAGCAC CTCTTTCATA TCTTCATCTG GCGTTAGTGG TAATGTGCAA 
TCGAACATCA AAGTTCTGGA TTTGAGTTAC AATAATATCT CCGATATTAC GAAGTATTAC 
TTCAAGCCGG TCGAGTATTC ACTCACTCAT CTGTATCTGT CAAACAATCA ATTAAGAAAC 
ATCACTCAGG ATGTCTTTGG CAATATGCCT CACTTGCAAT GGCTCGACTT GAGACATAAC 
GGGTTGATAG AGATATATTT TGATTGTTTG AAGAATACAA ATAACTTGCA AGTGTTATTT 
TTCTCTTGGA ACGAAATCAC AGACATCCCA GCGGAGACTC TAAGATCCTT GAAGAAATTG 
CGCATCGTGG ATTTGTCTCA TAACAAGCTG AGAACACTGC CAGATAACAT GTTTACTGAC 
TCTGATATAG AGAGTCTTGA TCTCTCGCAC AATCAATTCA CGAGACTGCC CGTTAAAAGT 
ATGTCGGTAA CTTCCACTGC AAATTTAGCA AATTTGGATA TGTCCTGGAA CATACTATCG 
GGGATTCATA CCACCGACAC AATATTCAGA CTTAGAGGTC TTGTGTGGTT AGATCTATCG 
TATAATCGAC TTGTTAGATT AGACGACGGC GTATTTTCTG ATTTACCATA TCTAGCTCAT 
CTTGACTTAA GCCACAATAA ACAACTTATT TTGGAAAGCC GCGGAAGGAC GTTCTATGGT 
TTAGAGGACA CACTTCTGTA TCTTGGTCTG AGCAATATTT CTCTCTTAAG TATTCCAGAG 
TTGCCTCTAA GACGATTGCA AACTTTAAAT CTGGCACATA ATGGATTGGC ATCGATTTCC 
CCGGAAATGT CGTCCAATCT TACATCTCTT CATTATTTAG ATTTAAGTTA TAATGATTTA 
ACGGTGGTAC CATTGATTAC TCACACATTA CCAGAATTAA AAACCTTCAA TTTGGCAAAC 
AATCCCATTA CTGCTATTAC AAATACTAGT TTTCTTGGTG TGGCTGATAG TCTCGAAGAG 
CTTGATATAC GAAAACTCAG TCTGTCAAGC TTTGAAGCAG GAGCACTTTG CAAAGCTACC 
AAACTCCGCA AATTACACAT TACTGCGTAC AATATAAAGA ATTTCAACTT TCCCAACATC 
CTAGAATATA ACCATGGTTT AAAACATTTG CTCATTGATA TTCAAAATGA CACCAATCTA 
GAGAAAGAAA TGAGAGGGAA ATTGCCTTAT AAATTATACA AAATTACGTT GACTGGTAAA 
GCTTTAAAGA CTATACATCC AGAGATACTA CACGGTATGC GAAATCCCCA TCTTCACTTC 
AATTTATACA ATACCAGCGT GGCAATTGTG CCGCGAGAAA TATTTAGAAA CGCACAGCGT 
GTGCGTAATG TAACTGTAGA AATTCGCAAT AGCGATATAC GATCATTGCA TAATCCATCA 
TCCAGTTACA AACCGGGAGT ACCAGGCCAG CGATTCCTTA TGAAACTTCG ATTAGCGAAT 
AGTCATGTCA ATTGCGATTG CGATATTGGC TGGATAGAAA TATGGCAAAG GAAGCACAGA 
CAATATCAAG AGGACCAATG TATTTCTTAC GACGAATTCC ATAATTTCGA GCGAGAGGAG 
AGCGATGAAT TTAATTGTTG GGACAATGGT TGGGATGACG ATATCCGCGA AACGTTCTGT 
CTGAACAAAA ACAACGTATC GTTGTCAAAT TTGTTAAAAA TGGAGCTAGA ATGTGGATGG 
GCCACGGCAA ACATTATCGA GCTGAACACT ATTTTCTTGG TGTTTTCAGT CATTTTAGCT 
GCTGTTTTGT ATTAA