LOC108688118 cDNA ORF clone, Atta colombica

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC108688118
Entrez Gene ID	108688118
Full Name	rhodopsin-like
Synonyms	Rhodopsin
Gene Type	protein-coding
Organism	Atta colombica

mRNA and Protein(s)

mRNA	Protein	Name
XM_018194224.1	XP_018049713.1	rhodopsin-like

Pathways from BioSystems
Gene Ontology

The following LOC108688118 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC108688118 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAt86135	XM_018194224.1 Latest version!	Atta colombica rhodopsin-like (LOC108688118), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC108688118 ( XM_018194224.1 ) cDNA ORF clone, Atta colombica -> XP_018049713.1 Atta colombica rhodopsin-like (LOC108688118), mRNA.

Price & Availability↑

CloneID	OAt86135
Clone ID Related Accession (Same CDS sequence)	XM_018194224.1
Accession Version	XM_018194224.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1182bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-09-18
Organism	Atta colombica
Product	rhodopsin-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017259322.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Atta colombica Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGTCCC TTATTACAGT AAGTACCGAA AATTTGACTA TTTTCTCTGA GAATTCCACC 
ATGGCGTTTG CTGATATAAC AAGGACGATC GGACCTCGAG CTATGCAGCA AATTATGTCT 
TTCAATAATA AAACTGTAGT GAATAAAGTA CCTCCGGATA TGATGCACTT AATCGATCCA 
CATTGGTATC AGTTTCCACC GATAAATCCA ATGTGGCACA AAATTCTAGG CCTTGTGATG 
ATTGTGTTAG GATTTATGGG ATGGTGCGGT AATGGTGTTG TAGTATATAT ATTCTTGATG 
ACACCCTCCC TAAGAACACC GAGCAATCTT CTAATAGTAA ATTTGGCATT TTCGGACTTT 
ATTATGATGA TCATTATGAC GCCTCATATG ATGATCAACT GTTACTATGA GACCTGGATA 
TTAGGGCCGC TAATGTGCGA TATGCATGCC ATGGTTGGTT CCTTATGTGG ATGCGCTTCA 
ATATGGACTA TGACTGCTAT TGCTTTGGAC AGATACAATG TTATAGTAAA GGGTATGGCG 
GGAAAGCCAC TCACCATCAA GAAAGCATTA CTCGAAATTT TAATAATCTG GCTCTTCGCT 
TCAATATGGG CAATTTTACC CATAGTGGGA TGGAATAGAT ATGTACCAGA AGGCAATATG 
ACCGCTTGTG GTACAGATTA TCTTACTAAG GATTGGAGTT CCAAATCATA TATCTTGGTG 
TACTCGATAT TTGTATATTA TATGCCGCTG CTTATTATAA TTTACAGTTA TTATTTTATC 
GTTTCGACAG TAGCTGCTCA TGAAAGAACA ATGAGAGAAC AAGCTAAGAA AATGAATGTT 
CAATCTTTAC GATCTGGAGA TAATCAAAAT ATAAGTGCAG AAGCAAAATT GGCAAAGGTG 
GCACTAATGA CCATTTCTTT ATGGTTCATG GCTTGGACGC CGTATCTGGT TATTAATTAT 
GTCGGTATTT TCGGTATTGC TAAAATTAGT CCTCTTTTCA CCATCTGGGG ATCTCTCTTT 
GCAAAGGCAA ACGCTATATA TAATCCAATT GTTTATGGAA TAAGTCATCC AAAATATAGA 
GCGGCATTAA AGGAAAAATT ACCTTTCTTT GTATGTGGCT CAACTGAAGA CCCATCTGTG 
GCTGCGAAAA CTGCAGAAAC GTCATCTACA ACTACAACGT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_018049713.1
CDS	38..1219
Translation	MESLITVSTENLTIFSENSTMAFADITRTIGPRAMQQIMSFNNKTVVNKVPPDMMHLIDPHWYQFPPINPMWHKILGLVMIVLGFMGWCGNGVVVYIFLMTPSLRTPSNLLIVNLAFSDFIMMIIMTPHMMINCYYETWILGPLMCDMHAMVGSLCGCASIWTMTAIALDRYNVIVKGMAGKPLTIKKALLEILIIWLFASIWAILPIVGWNRYVPEGNMTACGTDYLTKDWSSKSYILVYSIFVYYMPLLIIIYSYYFIVSTVAAHERTMREQAKKMNVQSLRSGDNQNISAEAKLAKVALMTISLWFMAWTPYLVINYVGIFGIAKISPLFTIWGSLFAKANAIYNPIVYGISHPKYRAALKEKLPFFVCGSTEDPSVAAKTAETSSTTTT

Target ORF information:

RefSeq Version	XM_018194224.1
Organism	Atta colombica
Definition	Atta colombica rhodopsin-like (LOC108688118), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_018194224.1

ORF Insert Sequence:

ATGGAGTCCC TTATTACAGT AAGTACCGAA AATTTGACTA TTTTCTCTGA GAATTCCACC 
ATGGCGTTTG CTGATATAAC AAGGACGATC GGACCTCGAG CTATGCAGCA AATTATGTCT 
TTCAATAATA AAACTGTAGT GAATAAAGTA CCTCCGGATA TGATGCACTT AATCGATCCA 
CATTGGTATC AGTTTCCACC GATAAATCCA ATGTGGCACA AAATTCTAGG CCTTGTGATG 
ATTGTGTTAG GATTTATGGG ATGGTGCGGT AATGGTGTTG TAGTATATAT ATTCTTGATG 
ACACCCTCCC TAAGAACACC GAGCAATCTT CTAATAGTAA ATTTGGCATT TTCGGACTTT 
ATTATGATGA TCATTATGAC GCCTCATATG ATGATCAACT GTTACTATGA GACCTGGATA 
TTAGGGCCGC TAATGTGCGA TATGCATGCC ATGGTTGGTT CCTTATGTGG ATGCGCTTCA 
ATATGGACTA TGACTGCTAT TGCTTTGGAC AGATACAATG TTATAGTAAA GGGTATGGCG 
GGAAAGCCAC TCACCATCAA GAAAGCATTA CTCGAAATTT TAATAATCTG GCTCTTCGCT 
TCAATATGGG CAATTTTACC CATAGTGGGA TGGAATAGAT ATGTACCAGA AGGCAATATG 
ACCGCTTGTG GTACAGATTA TCTTACTAAG GATTGGAGTT CCAAATCATA TATCTTGGTG 
TACTCGATAT TTGTATATTA TATGCCGCTG CTTATTATAA TTTACAGTTA TTATTTTATC 
GTTTCGACAG TAGCTGCTCA TGAAAGAACA ATGAGAGAAC AAGCTAAGAA AATGAATGTT 
CAATCTTTAC GATCTGGAGA TAATCAAAAT ATAAGTGCAG AAGCAAAATT GGCAAAGGTG 
GCACTAATGA CCATTTCTTT ATGGTTCATG GCTTGGACGC CGTATCTGGT TATTAATTAT 
GTCGGTATTT TCGGTATTGC TAAAATTAGT CCTCTTTTCA CCATCTGGGG ATCTCTCTTT 
GCAAAGGCAA ACGCTATATA TAATCCAATT GTTTATGGAA TAAGTCATCC AAAATATAGA 
GCGGCATTAA AGGAAAAATT ACCTTTCTTT GTATGTGGCT CAACTGAAGA CCCATCTGTG 
GCTGCGAAAA CTGCAGAAAC GTCATCTACA ACTACAACGT AA