LOC107196821 cDNA ORF clone, Astyanax mexicanus(Mexican tetra)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107196821
Entrez Gene ID	107196821
Full Name	interferon-inducible GTPase 5-like
Gene Type	protein-coding
Organism	Astyanax mexicanus(Mexican tetra)

mRNA and Protein(s)

mRNA	Protein	Name
XM_022684714.1	XP_022540435.1	interferon-inducible GTPase 5-like
XM_015605649.1	XP_015461135.1	interferon-inducible GTPase 5-like

Pathways from BioSystems
Gene Ontology

The following LOC107196821 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107196821 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAs120633	XM_022684714.1 Latest version!	Astyanax mexicanus interferon-inducible GTPase 5-like (LOC107196821), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OAs31155	XM_015605649.1 Latest version!	Astyanax mexicanus interferon-inducible GTPase 5-like (LOC107196821), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107196821 ( XM_022684714.1 ) cDNA ORF clone, Astyanax mexicanus(Mexican tetra) -> XP_022540435.1 Astyanax mexicanus interferon-inducible GTPase 5-like (LOC107196821), mRNA.

Price & Availability↑

CloneID	OAs120633
Clone ID Related Accession (Same CDS sequence)	XM_022684714.1
Accession Version	XM_022684714.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1029bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-10-02
Organism	Astyanax mexicanus(Mexican tetra)
Product	interferon-inducible GTPase 5-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_035921.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Astyanax mexicanus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGTCAAAA TTAAAAATGT TGAAGAAATG GATGAAGTAT TGGATGACGA CAATGCTTTC 
AGAGGAATGG GGGATGATGA AGAGGACTCT GCAGCAACTG GAGTTGTAGA GACTACTAAG 
GTTTCTACAG CTTACCCATT TACAAAATAC CAAAATGTTA TACTGTGGGA TCTTCCTGGT 
ATTGGAACAC CCAACTTCCA AGCAGATGAG TATCTGCAGC AGGTTGAAGT TGGGCAGCGC 
TTTTTTTATT TGGGAATTTT TTTTTTTATC ATAATCATTG CGTCAGATCG CTTCAAAACA 
TACCATGCTC TTTTAGCAGC AGAGATCGTC AAAATGGATA AGAGATTCTA CTTTGTTCGC 
TCGAAGATTG ACACCAACAT TTATGCTGAA CGAAGAAAGA AGACTTTCAA CAAGCAAAAA 
ACATTAGATG CTATCCGAGA AGACTGCATT GAAGGTCTGA AAAATATTGG AGTGGACTCT 
CCTGTTGTCT TCTTGATCAC ATCCTTCGAC CTTGCCCTCT ACGATTTCAA ACATCTGGAG 
GAGAAAATGG AAAAGGAGGT TCAACAGCAC AAGAAACATT TGCTGATGTT GGCTCTTCCA 
AACATCTACC TGGAGATCAA CGAAAGAAAG AAGAGGGAAC TAGAAAAAGA TATATGGAAG 
CTGGCTCAGC TGTCTGCTAG AGCAGCCTCT GTGCCAGTCC CTCTACTGAA TGCAGCTCTT 
TCAATCAGTG TAGATGTGGC GATTTTGGTG ACAGAGCTCA GAAGATACTA CAATGTTTTC 
AGTCTTGATC CTGCCTCCCT GCAAAAGCTT GCTGACAGAT CAGGGAAGTC AGTAGATGAG 
CTGAAATCTG TGCTGAAGTC TCCTCTGCAT GCAGAAATAA ACAAAGATCT GGTCATTAAG 
TTGCTGACTG GCAGTAGTGT TGCTGCTACA GAAGCAGCAG CAGAATACTT CCTGGGTTTG 
ATTCCTGGTC TGGGATTCCT CTCTTTCAAT CAGTGTAGAT GTGGTGATTT GGGTGAAAGA 
GCTTATTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_022540435.1
CDS	39..1067
Translation	MVKIKNVEEMDEVLDDDNAFRGMGDDEEDSAATGVVETTKVSTAYPFTKYQNVILWDLPGIGTPNFQADEYLQQVEVGQRFFYLGIFFFIIIIASDRFKTYHALLAAEIVKMDKRFYFVRSKIDTNIYAERRKKTFNKQKTLDAIREDCIEGLKNIGVDSPVVFLITSFDLALYDFKHLEEKMEKEVQQHKKHLLMLALPNIYLEINERKKRELEKDIWKLAQLSARAASVPVPLLNAALSISVDVAILVTELRRYYNVFSLDPASLQKLADRSGKSVDELKSVLKSPLHAEINKDLVIKLLTGSSVAATEAAAEYFLGLIPGLGFLSFNQCRCGDLGERAY

Target ORF information:

RefSeq Version	XM_022684714.1
Organism	Astyanax mexicanus(Mexican tetra)
Definition	Astyanax mexicanus interferon-inducible GTPase 5-like (LOC107196821), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_022684714.1

ORF Insert Sequence:

ATGGTCAAAA TTAAAAATGT TGAAGAAATG GATGAAGTAT TGGATGACGA CAATGCTTTC 
AGAGGAATGG GGGATGATGA AGAGGACTCT GCAGCAACTG GAGTTGTAGA GACTACTAAG 
GTTTCTACAG CTTACCCATT TACAAAATAC CAAAATGTTA TACTGTGGGA TCTTCCTGGT 
ATTGGAACAC CCAACTTCCA AGCAGATGAG TATCTGCAGC AGGTTGAAGT TGGGCAGCGC 
TTTTTTTATT TGGGAATTTT TTTTTTTATC ATAATCATTG CGTCAGATCG CTTCAAAACA 
TACCATGCTC TTTTAGCAGC AGAGATCGTC AAAATGGATA AGAGATTCTA CTTTGTTCGC 
TCGAAGATTG ACACCAACAT TTATGCTGAA CGAAGAAAGA AGACTTTCAA CAAGCAAAAA 
ACATTAGATG CTATCCGAGA AGACTGCATT GAAGGTCTGA AAAATATTGG AGTGGACTCT 
CCTGTTGTCT TCTTGATCAC ATCCTTCGAC CTTGCCCTCT ACGATTTCAA ACATCTGGAG 
GAGAAAATGG AAAAGGAGGT TCAACAGCAC AAGAAACATT TGCTGATGTT GGCTCTTCCA 
AACATCTACC TGGAGATCAA CGAAAGAAAG AAGAGGGAAC TAGAAAAAGA TATATGGAAG 
CTGGCTCAGC TGTCTGCTAG AGCAGCCTCT GTGCCAGTCC CTCTACTGAA TGCAGCTCTT 
TCAATCAGTG TAGATGTGGC GATTTTGGTG ACAGAGCTCA GAAGATACTA CAATGTTTTC 
AGTCTTGATC CTGCCTCCCT GCAAAAGCTT GCTGACAGAT CAGGGAAGTC AGTAGATGAG 
CTGAAATCTG TGCTGAAGTC TCCTCTGCAT GCAGAAATAA ACAAAGATCT GGTCATTAAG 
TTGCTGACTG GCAGTAGTGT TGCTGCTACA GAAGCAGCAG CAGAATACTT CCTGGGTTTG 
ATTCCTGGTC TGGGATTCCT CTCTTTCAAT CAGTGTAGAT GTGGTGATTT GGGTGAAAGA 
GCTTATTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC107196821 ( XM_015605649.1 ) cDNA ORF clone, Astyanax mexicanus(Mexican tetra) -> XP_015461135.1 Astyanax mexicanus interferon-inducible GTPase 5-like (LOC107196821), mRNA.

Price & Availability↑

CloneID	OAs31155
Clone ID Related Accession (Same CDS sequence)	XM_015605649.1
Accession Version	XM_015605649.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1218bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-02-10
Organism	Astyanax mexicanus(Mexican tetra)
Product	interferon-inducible GTPase 5-like
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006749305.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Astyanax mexicanus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 16% of CDS bases ##RefSeq-Attributes-END##

ATGGATGAAG TATTGGATGA CGACAATGCT TTCAGAGGAA TGGGGGATGA TGAAGAGGAC 
TCTGCAGCAA CTGGAGTTGT AGAGACTACT AAGGTTTCTA CAGCTTACCC ATTTACAAAA 
TACCAAAATG TTATACTGTG GGATCTTCCT GGTATTGGAA CACCCAACTT CCAAGCAGAT 
GAGTATCTGC AGCAGGTTGA GTTTCAGCGC TATGATTTTT TCATAATCAT TGCGTCAGAT 
CGCTTCAAAA CATACCATGC TCTTTTAGCA GCAGAGATCG TCAAAATGGA TAAGAGATTC 
TACTTTGTTC GCTCGAAGAT TGACACCAAC ATTTATGCTG AACGAAGAAA GAAGACTTTC 
AACAAGCAAA AAACATTAGA TGCTATCCGA GAAGACTGCA TTGAAGGTCT GAAAAATATT 
GGAGTGGACT CTCCTGTTGT CTTCTTGATC ACATCCTTCG ACCTTGCCCT CTACGATTTC 
AAACATCTGG AGGAGAAAAT GGAAAAGGAG GTTCAACAGC ACAAGAAACA TTTGCTGATG 
TTGGCTCTTC CAAACATCTA CCTGGAGATC AACGAAAGAA AGAAGAGGGA ACTAGAAAAA 
GATATATGGA AGCTGGCTCA GCTGTCTGCT AGAGCAGCCT CTGTGCCAGT CCCTCTACTG 
AATGCAGCTC TTTCAATCAG TGTAGATGTG GCGATTTTGG TGACAGAGCT CAGAAGATAC 
TACAATGTTT TCAGTCTTGA TCCTGCCTCC CTGCAAAAGC TTGCTGACAG ATCAGGGAAG 
TCAGTAGATG AGCTGAAATC TGTGCTGAAG TCTCCTCTGC ATGCAGAAAT AAACAAAGAT 
CTGGTCATTA AGTTGCTGAC TGGCAGTAGT GTTGCTGCTA CAGAAGCAGC AGCAGAATAC 
TTCCTGGGTT TGATTCCTGG TCTGGGATTC CTCTCTTTCA ATCAATCAGG AAAGTCAGTA 
GATGAGCTGA AGTCTGTGCT GAAATCTCCT CTGCATGAAG GAATAAACAT AGATGTGGTT 
ATTAAGTTGC TGTGTCAAAG TATTGCTGCT ACAAAAGCAG CTGAAAAATA CTTCCTGGGT 
GTGATCCCCA TCCTGGGATC CCTGGCAGCT GGTTCACTGT CCTTTGACAA CGTGTATTTT 
ACGCTAAAGC ACTGCCTTGA TGGGCTGTAT GAAGATGCCT TTAGTGTGCT TATTGCTGTT 
CTGCAAACCC CAGTGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_015461135.1
CDS	1..1218
Translation	MDEVLDDDNAFRGMGDDEEDSAATGVVETTKVSTAYPFTKYQNVILWDLPGIGTPNFQADEYLQQVEFQRYDFFIIIASDRFKTYHALLAAEIVKMDKRFYFVRSKIDTNIYAERRKKTFNKQKTLDAIREDCIEGLKNIGVDSPVVFLITSFDLALYDFKHLEEKMEKEVQQHKKHLLMLALPNIYLEINERKKRELEKDIWKLAQLSARAASVPVPLLNAALSISVDVAILVTELRRYYNVFSLDPASLQKLADRSGKSVDELKSVLKSPLHAEINKDLVIKLLTGSSVAATEAAAEYFLGLIPGLGFLSFNQSGKSVDELKSVLKSPLHEGINIDVVIKLLCQSIAATKAAEKYFLGVIPILGSLAAGSLSFDNVYFTLKHCLDGLYEDAFSVLIAVLQTPV

Target ORF information:

RefSeq Version	XM_015605649.1
Organism	Astyanax mexicanus(Mexican tetra)
Definition	Astyanax mexicanus interferon-inducible GTPase 5-like (LOC107196821), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_015605649.1

ORF Insert Sequence:

ATGGATGAAG TATTGGATGA CGACAATGCT TTCAGAGGAA TGGGGGATGA TGAAGAGGAC 
TCTGCAGCAA CTGGAGTTGT AGAGACTACT AAGGTTTCTA CAGCTTACCC ATTTACAAAA 
TACCAAAATG TTATACTGTG GGATCTTCCT GGTATTGGAA CACCCAACTT CCAAGCAGAT 
GAGTATCTGC AGCAGGTTGA GTTTCAGCGC TATGATTTTT TCATAATCAT TGCGTCAGAT 
CGCTTCAAAA CATACCATGC TCTTTTAGCA GCAGAGATCG TCAAAATGGA TAAGAGATTC 
TACTTTGTTC GCTCGAAGAT TGACACCAAC ATTTATGCTG AACGAAGAAA GAAGACTTTC 
AACAAGCAAA AAACATTAGA TGCTATCCGA GAAGACTGCA TTGAAGGTCT GAAAAATATT 
GGAGTGGACT CTCCTGTTGT CTTCTTGATC ACATCCTTCG ACCTTGCCCT CTACGATTTC 
AAACATCTGG AGGAGAAAAT GGAAAAGGAG GTTCAACAGC ACAAGAAACA TTTGCTGATG 
TTGGCTCTTC CAAACATCTA CCTGGAGATC AACGAAAGAA AGAAGAGGGA ACTAGAAAAA 
GATATATGGA AGCTGGCTCA GCTGTCTGCT AGAGCAGCCT CTGTGCCAGT CCCTCTACTG 
AATGCAGCTC TTTCAATCAG TGTAGATGTG GCGATTTTGG TGACAGAGCT CAGAAGATAC 
TACAATGTTT TCAGTCTTGA TCCTGCCTCC CTGCAAAAGC TTGCTGACAG ATCAGGGAAG 
TCAGTAGATG AGCTGAAATC TGTGCTGAAG TCTCCTCTGC ATGCAGAAAT AAACAAAGAT 
CTGGTCATTA AGTTGCTGAC TGGCAGTAGT GTTGCTGCTA CAGAAGCAGC AGCAGAATAC 
TTCCTGGGTT TGATTCCTGG TCTGGGATTC CTCTCTTTCA ATCAATCAGG AAAGTCAGTA 
GATGAGCTGA AGTCTGTGCT GAAATCTCCT CTGCATGAAG GAATAAACAT AGATGTGGTT 
ATTAAGTTGC TGTGTCAAAG TATTGCTGCT ACAAAAGCAG CTGAAAAATA CTTCCTGGGT 
GTGATCCCCA TCCTGGGATC CCTGGCAGCT GGTTCACTGT CCTTTGACAA CGTGTATTTT 
ACGCTAAAGC ACTGCCTTGA TGGGCTGTAT GAAGATGCCT TTAGTGTGCT TATTGCTGTT 
CTGCAAACCC CAGTGTAA