LOC109713001 cDNA ORF clone, Ananas comosus(pineapple)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC109713001
Entrez Gene ID	109713001
Full Name	vacuolar protein sorting-associated protein 41 homolog
Gene Type	protein-coding
Organism	Ananas comosus(pineapple)

mRNA and Protein(s)

mRNA	Protein	Name
XM_020236905.1	XP_020092494.1	vacuolar protein sorting-associated protein 41 homolog

Pathways from BioSystems
Gene Ontology

The following LOC109713001 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC109713001 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAn68034	XM_020236905.1 Latest version!	Ananas comosus vacuolar protein sorting-associated protein 41 homolog (LOC109713001), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$510.30 $729.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC109713001 ( XM_020236905.1 ) cDNA ORF clone, Ananas comosus(pineapple) -> XP_020092494.1 Ananas comosus vacuolar protein sorting-associated protein 41 homolog (LOC109713001), mRNA.

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CloneID	OAn68034
Clone ID Related Accession (Same CDS sequence)	XM_020236905.1
Accession Version	XM_020236905.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2886bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-02-14
Organism	Ananas comosus(pineapple)
Product	vacuolar protein sorting-associated protein 41 homolog
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_033627.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ananas comosus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGTCGG AGCTCCAACC CTCGGAGAAC GGGGTCGAGG GGGACGACGA GAGGGAGGAG 
GAGGACGACG ACGAGGAGGA GGAGGAAGAG GAGGAGGAGG AGGAGGAGGA GGAGGAGCAT 
GTAGAGAACA GGGGAGAGGA GGAGGCGGAA GAGGACGAGG AGGAGCCGAG GCTCAAGTAC 
CAGAGAATGG GGGGGAGCGT TCCCCCCCTC CTCTCCACCG ACGCCGCCGC GTCCATCGCC 
GTCGCCGAGC GCATGGTCGC CCTCGGCACC CACGACGGCA CCGTCCACAT CCTCGATTTC 
CAGGGCAATC AGGTCAAAGA ATTTGCTGCT CATACCGCTA CAGTCAACGA CCTTAGCTTT 
GATGCAGAAG GTGAATTTAT TGGTAGCTGC TCAGATGATG GATCTGTAGT TATAAGCAGC 
CTTTTTACGG ATGAAAAATT GAAATTCGAG TATCATCGGC CTATGAAAGC AATAGCTCTA 
GACCCTGACT ATTCACGGAA ATCCTCAAGA AGGTTTGTCG CGGGTGGTTT AGCTGGTCAA 
CTATTTCTCA ACATGAAGAA CTGGCTAGGT TATAATAAGC AGATTCTGCA TGACGGTGAG 
GGTCCAATTC ATACCGTGAA GTGGAGAACA AGTCTTATTG CTTGGGCTAA TGATGCAGGA 
GTAAAAGTTT ATGACATGGC AAATCATCAG CGAATTTCTT TTATTGAGAG ACCGAGGGGA 
ATCCCCCGTC CAGAGCTTTT ACTTCCTCAC TTGGTGTGGC AGGATGACAC TCTCTTGGTC 
ATTGGCTGGG GAACGAGTGT AAAGATTGCT GCCATTAGAG CTAATTCTCC CAATGGTGTG 
AATGGTGTAC GGACAAATAT TTCCATTTCA AGTACTAAGT ATGTGGATAT TGTGGCCTCT 
TTTCAAACTA GTTACTACAT TTCTGGTATT GCTCCATACG GCGATGCTTT AGTAGTACTA 
GCATACATCC CGGAGGAGCA AAATGGAGAA AAGGATTTCA GTACAACTGT CCCATCACGG 
CAGGGAACTG CACAAAGGCC AGAAATACGA ATTGTCACAT GGAAAAATGA GGAACTAACA 
ACTGATGCTT TACCTGTTCA TGGCTATGAA CATTATAAGG CAAAAGATTA TGCTCTTGCA 
CATGCTCCAT TCACAGGAAG CAGCTATGCT GGTGGTCAGT GGGCTGCTGG TGATGAACCT 
CTCTATTATA TCGTATCTCC CAAAGACATA GTGATTGCGA GGCCTAGAGA TGCTGAAGAT 
CACATAGCTT GGCTTCTTCA TCATGGTTGG CATGAAAAGG CATTAGCTGC AGTTGAAGCG 
GGACAGGGAC GGACTGAACT TCTTGATGAG GTGGGATCAA GATACCTTGA TCATCTAATT 
GTTGAAAGGA AATATGCAGA AGCTGCATCT TTGTGTCCTA AGTTACTCCG TGGATCCGCT 
TCAGCATGGG AAAGGTGGGT TTTTCACTTT GCCCATCTGC GCCAGCTTCC TGTGTTGGTT 
CCTTACATTC CTACAGACTA TCCTCAGCTG AGTGATACTG CATATGAGGT TGCCCTTGTT 
GCATTGGCTA CTAACCCGCC ATTTCACAAA CTTCTCTTGT CAACTGTTAA ATCGTGGCCG 
CCTACATTAT ATTCTGTATC ACCTGTTATT TCTGCCATTG AGCCACAAAT GAATACCTCC 
TCTATGACTG ATAATTTGAA AGAGGCATTA GCTGAATTAT ATGTGATCAA TGGACTGTAT 
GAGAAAGCCT TTGGTTTGTA TGCTGATGTA TTGAAGCCTG ACGTTTTCAA TTTTATTGAA 
AAGCACAGTT TATATCATGC CGTTCATGAC AAGGTGGTCG ATCTTATGAT ACTTGACAGT 
AAAAGAACAG TTCTTTTATT GATCCAACAC CGTGATATAA TTCCTCCATC TGAAGTTGTC 
GGGCAGCTTT TGCAGTCCAA TAAAAAGTGT GACAAGAGAT ATTTCTTGCA TCTTTACTTG 
CATTCCCTTT TTGAGGTTGA CATTAATGCT GGAAAAGAGT TCCATGATAT GCAGGTAGAG 
CTTTATGCAG ATTACGAATC ACGATTGCTA CTCCCTTTTC TTCGTACCAG TCAGCATTAC 
AGGCTAGACA AGGCTTATGA AATTTGTGCT AGGAAAGAGC TCATAAGAGA GCAAGTCTTT 
GTCCTTGGTA GGATGGGAAA TGCAAAACAG GCCCTTGCTA TTATTATAAA TAAGTTGGAG 
GACATACAGG AGGCTGTAGA ATTTGTGACC GATCAACATG ATGATGAACT ATGGGAGGAG 
TTAATCAGGC AATGCCTTCA GAAGCCTGAA ATGGTAGGAA TGTTGTTGGA GCACACTGTT 
GGTAATCTTG ATCCTCTCTA CATTGTTAAT GTTGTGCCCA ATGGATTAGA AATTCCTCGG 
TTACGGGACC GCCTTGTCAA AATTATAACC GATTACCGAA CCGAAATGTC GCTTAGACAC 
GGATGCAATG ACATCCTCAA GGCTGATTGC GTCAACCTCT TGGTTAAGTA CTTCAATGAG 
GCTCGCCGGG CCGTGTACTT GGGTAGTATA GAAGAAGAGG CGCAAAATAA GAGGGAAGAC 
GGTACCTCCA CCCGCTCAAT TGAGAGACTC CAAAGCTCAA GAACGATCGA ATTAAAATCG 
AGGACAAGGG GCGGAGGGCG ATGCTGCCTC TGCTTCGACC CTTTCTCGAT CCGTGACCTG 
TCGGTTGTCG TGTTCTTCTG CTGCCACGGG TACCACGTCC CGTGCCTCAT GGATGGGTTG 
GAAACTATGA AAGCAAAGAG CACTAAATCT AGCAGCGACG ACGACAATGA CGGCGAGGAT 
GACGATGAAA CCCGATCAGG TGAGTCTCGT ATGCGGTGCG TGTTGTGCAC CACAGCTGCT 
GGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_020092494.1
CDS	120..3005
Translation	MASELQPSENGVEGDDEREEEDDDEEEEEEEEEEEEEEEHVENRGEEEAEEDEEEPRLKYQRMGGSVPPLLSTDAAASIAVAERMVALGTHDGTVHILDFQGNQVKEFAAHTATVNDLSFDAEGEFIGSCSDDGSVVISSLFTDEKLKFEYHRPMKAIALDPDYSRKSSRRFVAGGLAGQLFLNMKNWLGYNKQILHDGEGPIHTVKWRTSLIAWANDAGVKVYDMANHQRISFIERPRGIPRPELLLPHLVWQDDTLLVIGWGTSVKIAAIRANSPNGVNGVRTNISISSTKYVDIVASFQTSYYISGIAPYGDALVVLAYIPEEQNGEKDFSTTVPSRQGTAQRPEIRIVTWKNEELTTDALPVHGYEHYKAKDYALAHAPFTGSSYAGGQWAAGDEPLYYIVSPKDIVIARPRDAEDHIAWLLHHGWHEKALAAVEAGQGRTELLDEVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYIPTDYPQLSDTAYEVALVALATNPPFHKLLLSTVKSWPPTLYSVSPVISAIEPQMNTSSMTDNLKEALAELYVINGLYEKAFGLYADVLKPDVFNFIEKHSLYHAVHDKVVDLMILDSKRTVLLLIQHRDIIPPSEVVGQLLQSNKKCDKRYFLHLYLHSLFEVDINAGKEFHDMQVELYADYESRLLLPFLRTSQHYRLDKAYEICARKELIREQVFVLGRMGNAKQALAIIINKLEDIQEAVEFVTDQHDDELWEELIRQCLQKPEMVGMLLEHTVGNLDPLYIVNVVPNGLEIPRLRDRLVKIITDYRTEMSLRHGCNDILKADCVNLLVKYFNEARRAVYLGSIEEEAQNKREDGTSTRSIERLQSSRTIELKSRTRGGGRCCLCFDPFSIRDLSVVVFFCCHGYHVPCLMDGLETMKAKSTKSSSDDDNDGEDDDETRSGESRMRCVLCTTAAG

Target ORF information:

RefSeq Version	XM_020236905.1
Organism	Ananas comosus(pineapple)
Definition	Ananas comosus vacuolar protein sorting-associated protein 41 homolog (LOC109713001), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_020236905.1

ORF Insert Sequence:

ATGGCGTCGG AGCTCCAACC CTCGGAGAAC GGGGTCGAGG GGGACGACGA GAGGGAGGAG 
GAGGACGACG ACGAGGAGGA GGAGGAAGAG GAGGAGGAGG AGGAGGAGGA GGAGGAGCAT 
GTAGAGAACA GGGGAGAGGA GGAGGCGGAA GAGGACGAGG AGGAGCCGAG GCTCAAGTAC 
CAGAGAATGG GGGGGAGCGT TCCCCCCCTC CTCTCCACCG ACGCCGCCGC GTCCATCGCC 
GTCGCCGAGC GCATGGTCGC CCTCGGCACC CACGACGGCA CCGTCCACAT CCTCGATTTC 
CAGGGCAATC AGGTCAAAGA ATTTGCTGCT CATACCGCTA CAGTCAACGA CCTTAGCTTT 
GATGCAGAAG GTGAATTTAT TGGTAGCTGC TCAGATGATG GATCTGTAGT TATAAGCAGC 
CTTTTTACGG ATGAAAAATT GAAATTCGAG TATCATCGGC CTATGAAAGC AATAGCTCTA 
GACCCTGACT ATTCACGGAA ATCCTCAAGA AGGTTTGTCG CGGGTGGTTT AGCTGGTCAA 
CTATTTCTCA ACATGAAGAA CTGGCTAGGT TATAATAAGC AGATTCTGCA TGACGGTGAG 
GGTCCAATTC ATACCGTGAA GTGGAGAACA AGTCTTATTG CTTGGGCTAA TGATGCAGGA 
GTAAAAGTTT ATGACATGGC AAATCATCAG CGAATTTCTT TTATTGAGAG ACCGAGGGGA 
ATCCCCCGTC CAGAGCTTTT ACTTCCTCAC TTGGTGTGGC AGGATGACAC TCTCTTGGTC 
ATTGGCTGGG GAACGAGTGT AAAGATTGCT GCCATTAGAG CTAATTCTCC CAATGGTGTG 
AATGGTGTAC GGACAAATAT TTCCATTTCA AGTACTAAGT ATGTGGATAT TGTGGCCTCT 
TTTCAAACTA GTTACTACAT TTCTGGTATT GCTCCATACG GCGATGCTTT AGTAGTACTA 
GCATACATCC CGGAGGAGCA AAATGGAGAA AAGGATTTCA GTACAACTGT CCCATCACGG 
CAGGGAACTG CACAAAGGCC AGAAATACGA ATTGTCACAT GGAAAAATGA GGAACTAACA 
ACTGATGCTT TACCTGTTCA TGGCTATGAA CATTATAAGG CAAAAGATTA TGCTCTTGCA 
CATGCTCCAT TCACAGGAAG CAGCTATGCT GGTGGTCAGT GGGCTGCTGG TGATGAACCT 
CTCTATTATA TCGTATCTCC CAAAGACATA GTGATTGCGA GGCCTAGAGA TGCTGAAGAT 
CACATAGCTT GGCTTCTTCA TCATGGTTGG CATGAAAAGG CATTAGCTGC AGTTGAAGCG 
GGACAGGGAC GGACTGAACT TCTTGATGAG GTGGGATCAA GATACCTTGA TCATCTAATT 
GTTGAAAGGA AATATGCAGA AGCTGCATCT TTGTGTCCTA AGTTACTCCG TGGATCCGCT 
TCAGCATGGG AAAGGTGGGT TTTTCACTTT GCCCATCTGC GCCAGCTTCC TGTGTTGGTT 
CCTTACATTC CTACAGACTA TCCTCAGCTG AGTGATACTG CATATGAGGT TGCCCTTGTT 
GCATTGGCTA CTAACCCGCC ATTTCACAAA CTTCTCTTGT CAACTGTTAA ATCGTGGCCG 
CCTACATTAT ATTCTGTATC ACCTGTTATT TCTGCCATTG AGCCACAAAT GAATACCTCC 
TCTATGACTG ATAATTTGAA AGAGGCATTA GCTGAATTAT ATGTGATCAA TGGACTGTAT 
GAGAAAGCCT TTGGTTTGTA TGCTGATGTA TTGAAGCCTG ACGTTTTCAA TTTTATTGAA 
AAGCACAGTT TATATCATGC CGTTCATGAC AAGGTGGTCG ATCTTATGAT ACTTGACAGT 
AAAAGAACAG TTCTTTTATT GATCCAACAC CGTGATATAA TTCCTCCATC TGAAGTTGTC 
GGGCAGCTTT TGCAGTCCAA TAAAAAGTGT GACAAGAGAT ATTTCTTGCA TCTTTACTTG 
CATTCCCTTT TTGAGGTTGA CATTAATGCT GGAAAAGAGT TCCATGATAT GCAGGTAGAG 
CTTTATGCAG ATTACGAATC ACGATTGCTA CTCCCTTTTC TTCGTACCAG TCAGCATTAC 
AGGCTAGACA AGGCTTATGA AATTTGTGCT AGGAAAGAGC TCATAAGAGA GCAAGTCTTT 
GTCCTTGGTA GGATGGGAAA TGCAAAACAG GCCCTTGCTA TTATTATAAA TAAGTTGGAG 
GACATACAGG AGGCTGTAGA ATTTGTGACC GATCAACATG ATGATGAACT ATGGGAGGAG 
TTAATCAGGC AATGCCTTCA GAAGCCTGAA ATGGTAGGAA TGTTGTTGGA GCACACTGTT 
GGTAATCTTG ATCCTCTCTA CATTGTTAAT GTTGTGCCCA ATGGATTAGA AATTCCTCGG 
TTACGGGACC GCCTTGTCAA AATTATAACC GATTACCGAA CCGAAATGTC GCTTAGACAC 
GGATGCAATG ACATCCTCAA GGCTGATTGC GTCAACCTCT TGGTTAAGTA CTTCAATGAG 
GCTCGCCGGG CCGTGTACTT GGGTAGTATA GAAGAAGAGG CGCAAAATAA GAGGGAAGAC 
GGTACCTCCA CCCGCTCAAT TGAGAGACTC CAAAGCTCAA GAACGATCGA ATTAAAATCG 
AGGACAAGGG GCGGAGGGCG ATGCTGCCTC TGCTTCGACC CTTTCTCGAT CCGTGACCTG 
TCGGTTGTCG TGTTCTTCTG CTGCCACGGG TACCACGTCC CGTGCCTCAT GGATGGGTTG 
GAAACTATGA AAGCAAAGAG CACTAAATCT AGCAGCGACG ACGACAATGA CGGCGAGGAT 
GACGATGAAA CCCGATCAGG TGAGTCTCGT ATGCGGTGCG TGTTGTGCAC CACAGCTGCT 
GGATGA