IRF6 cDNA ORF clone, Alligator mississippiensis(American alligator)

Gene
Clones
gRNAs

Summary

Gene Symbol	IRF6
Entrez Gene ID	102572029
Full Name	interferon regulatory factor 6
Gene Type	protein-coding
Organism	Alligator mississippiensis(American alligator)

mRNA and Protein(s)

mRNA	Protein	Name
XM_014601121.2	XP_014456607.2	interferon regulatory factor 6 isoform X1
XM_006268079.3	XP_006268141.1	interferon regulatory factor 6 isoform X2

Pathways from BioSystems
Gene Ontology

The following IRF6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the IRF6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAl68120	XM_014601121.2 Latest version!	Alligator mississippiensis interferon regulatory factor 6 (IRF6), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OAl68121	XM_006268079.3 Latest version!	Alligator mississippiensis interferon regulatory factor 6 (IRF6), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

IRF6 ( XM_014601121.2 ) cDNA ORF clone, Alligator mississippiensis(American alligator) -> XP_014456607.2 Alligator mississippiensis interferon regulatory factor 6 (IRF6), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OAl68120
Clone ID Related Accession (Same CDS sequence)	XM_014601121.2
Accession Version	XM_014601121.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1482bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-12-08
Organism	Alligator mississippiensis(American alligator)
Product	interferon regulatory factor 6 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017712480.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2016 this sequence version replaced XM_014601121.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Alligator mississippiensis Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAAATTC AGGATACTGC ACTGGGCGGG GAGCCTGGGG AGTCTGGCAC CTCCATCATA 
ATCACTTCTG CCTCTGCTGG CAACGAGAAC GGCACAATAA TGGCACTGCA CCCACGGAGA 
GTTCGTTTGA AACCCTGGCT GGTAGCGCAG GTAGACAGTG GTCTGTACCC AGGCCTTGTC 
TGGCTAAATC GGGAAGTAAA GCGATTTCAG ATCCCCTGGA AGCATGCAAC ACGACACAGT 
CCTCAGCACG AAGAGGAGAA CACCATCTTT AAGGCATGGG CCGTGGAAAC GGGAAAGTAT 
CAGGAAGGAG TCGATGAGCC AGACCCTGCA AAATGGAAAG CCCAGCTCCG ATGTGCTCTC 
AACAAAAGCC GGGAATTCAA CTTGATGTAC GATGGAACCA AAGAGGTGCC CATGAACCCT 
ATTAAAATTT ACGAAGTGTG CGATATCCCG CAGTCCCAGG GATCAATCAT TAATCCAGGG 
TCCACTGGCT CTGCTCCCTG GGATGAGAAA GATAATGACC TTGATGATGA GGAAGAAGAA 
GAATTAAATC CATCTCAGCA TATCCCCATA CAGGACACTT TTCCGTTTCT TAATATTAAT 
GATTCCCCGA TGGCTCCAGC CAGTGTAGAA AGTTGCAGCA CTGAAGCGGC GTGGTCCAAG 
AATGAACCGG TAGATATGGA GATGCCCCCA AGTACTCTGC AGCATGACTT CTTCAGCTCC 
CCTGAGCTCT GGATTAGCTC TCTCCCAATG ACAGATCTAG AAATCAAGTT TGAATATCGA 
GGAAAAGAGA CTGGGCCAAC CTCAACTGTC AGCAATCCCC AGGGATGCAG GCTGTTCTAC 
GGAGAATTGG GTCCTATGCC AGACCAGGAA GAGCTGTTTG GACCTATTAG TCTGGAGCAA 
GTAAAGTTTC CAGGAACAGA ACAGATCACC AATGAAAAGC AAAAGATTTT CACAAGTCGG 
CTGCTAGATG TCATGGACAG GGGACTGATT CTGGAGGTCA GTGGCCATGC CATCTATGCC 
ATCCGGCTAT GTCAGTGCAA GGTGTACTGG TCTGGACCAT GTGCCCCTTC GTCCACCACA 
CCAAACCTGA TTGAGAGGCA AAAGAAAGTC AAACTCTTCT GTCTGGAAAC ATTTCTAAGT 
GAGCTGATTG CTCATCAGAA AGGACAGATG GAAAAACAGC CCCCCTTTGA GATCTACTTC 
TGTTTTGGGG AAGAATGGCC GGATGGAAAA CCTAGAGATA GAAAGCTGAT TGTGGTGCAG 
GTCATTCCAA TTGTAGCTCG GATGATTTAT GAAATGTTTT CGGGCGACTT CACACGTTCC 
TTCGACAGTG GCAGCGTGAG GCTTCAGATC TCCACGCCGG ATATTAAGGA CAACATCGTT 
GCCCATTTGA AACAGCTGTA CCGCCTCCTG CAGACCCACC AAGATACCTG GCCAATGCCG 
GCCCCAAATA TGCAGATTAC TCAACCGCTC CCAGCACAAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_014456607.2
CDS	66..1547
Translation	MEIQDTALGGEPGESGTSIIITSASAGNENGTIMALHPRRVRLKPWLVAQVDSGLYPGLVWLNREVKRFQIPWKHATRHSPQHEEENTIFKAWAVETGKYQEGVDEPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPIKIYEVCDIPQSQGSIINPGSTGSAPWDEKDNDLDDEEEEELNPSQHIPIQDTFPFLNINDSPMAPASVESCSTEAAWSKNEPVDMEMPPSTLQHDFFSSPELWISSLPMTDLEIKFEYRGKETGPTSTVSNPQGCRLFYGELGPMPDQEELFGPISLEQVKFPGTEQITNEKQKIFTSRLLDVMDRGLILEVSGHAIYAIRLCQCKVYWSGPCAPSSTTPNLIERQKKVKLFCLETFLSELIAHQKGQMEKQPPFEIYFCFGEEWPDGKPRDRKLIVVQVIPIVARMIYEMFSGDFTRSFDSGSVRLQISTPDIKDNIVAHLKQLYRLLQTHQDTWPMPAPNMQITQPLPAQ

Target ORF information:

RefSeq Version	XM_014601121.2
Organism	Alligator mississippiensis(American alligator)
Definition	Alligator mississippiensis interferon regulatory factor 6 (IRF6), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_014601121.2

ORF Insert Sequence:

ATGGAAATTC AGGATACTGC ACTGGGCGGG GAGCCTGGGG AGTCTGGCAC CTCCATCATA 
ATCACTTCTG CCTCTGCTGG CAACGAGAAC GGCACAATAA TGGCACTGCA CCCACGGAGA 
GTTCGTTTGA AACCCTGGCT GGTAGCGCAG GTAGACAGTG GTCTGTACCC AGGCCTTGTC 
TGGCTAAATC GGGAAGTAAA GCGATTTCAG ATCCCCTGGA AGCATGCAAC ACGACACAGT 
CCTCAGCACG AAGAGGAGAA CACCATCTTT AAGGCATGGG CCGTGGAAAC GGGAAAGTAT 
CAGGAAGGAG TCGATGAGCC AGACCCTGCA AAATGGAAAG CCCAGCTCCG ATGTGCTCTC 
AACAAAAGCC GGGAATTCAA CTTGATGTAC GATGGAACCA AAGAGGTGCC CATGAACCCT 
ATTAAAATTT ACGAAGTGTG CGATATCCCG CAGTCCCAGG GATCAATCAT TAATCCAGGG 
TCCACTGGCT CTGCTCCCTG GGATGAGAAA GATAATGACC TTGATGATGA GGAAGAAGAA 
GAATTAAATC CATCTCAGCA TATCCCCATA CAGGACACTT TTCCGTTTCT TAATATTAAT 
GATTCCCCGA TGGCTCCAGC CAGTGTAGAA AGTTGCAGCA CTGAAGCGGC GTGGTCCAAG 
AATGAACCGG TAGATATGGA GATGCCCCCA AGTACTCTGC AGCATGACTT CTTCAGCTCC 
CCTGAGCTCT GGATTAGCTC TCTCCCAATG ACAGATCTAG AAATCAAGTT TGAATATCGA 
GGAAAAGAGA CTGGGCCAAC CTCAACTGTC AGCAATCCCC AGGGATGCAG GCTGTTCTAC 
GGAGAATTGG GTCCTATGCC AGACCAGGAA GAGCTGTTTG GACCTATTAG TCTGGAGCAA 
GTAAAGTTTC CAGGAACAGA ACAGATCACC AATGAAAAGC AAAAGATTTT CACAAGTCGG 
CTGCTAGATG TCATGGACAG GGGACTGATT CTGGAGGTCA GTGGCCATGC CATCTATGCC 
ATCCGGCTAT GTCAGTGCAA GGTGTACTGG TCTGGACCAT GTGCCCCTTC GTCCACCACA 
CCAAACCTGA TTGAGAGGCA AAAGAAAGTC AAACTCTTCT GTCTGGAAAC ATTTCTAAGT 
GAGCTGATTG CTCATCAGAA AGGACAGATG GAAAAACAGC CCCCCTTTGA GATCTACTTC 
TGTTTTGGGG AAGAATGGCC GGATGGAAAA CCTAGAGATA GAAAGCTGAT TGTGGTGCAG 
GTCATTCCAA TTGTAGCTCG GATGATTTAT GAAATGTTTT CGGGCGACTT CACACGTTCC 
TTCGACAGTG GCAGCGTGAG GCTTCAGATC TCCACGCCGG ATATTAAGGA CAACATCGTT 
GCCCATTTGA AACAGCTGTA CCGCCTCCTG CAGACCCACC AAGATACCTG GCCAATGCCG 
GCCCCAAATA TGCAGATTAC TCAACCGCTC CCAGCACAAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

IRF6 ( XM_006268079.3 ) cDNA ORF clone, Alligator mississippiensis(American alligator) -> XP_006268141.1 Alligator mississippiensis interferon regulatory factor 6 (IRF6), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OAl68121
Clone ID Related Accession (Same CDS sequence)	XM_006268079.3
Accession Version	XM_006268079.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1383bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-12-08
Organism	Alligator mississippiensis(American alligator)
Product	interferon regulatory factor 6 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017712480.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2016 this sequence version replaced XM_006268079.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Alligator mississippiensis Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCACTGC ACCCACGGAG AGTTCGTTTG AAACCCTGGC TGGTAGCGCA GGTAGACAGT 
GGTCTGTACC CAGGCCTTGT CTGGCTAAAT CGGGAAGTAA AGCGATTTCA GATCCCCTGG 
AAGCATGCAA CACGACACAG TCCTCAGCAC GAAGAGGAGA ACACCATCTT TAAGGCATGG 
GCCGTGGAAA CGGGAAAGTA TCAGGAAGGA GTCGATGAGC CAGACCCTGC AAAATGGAAA 
GCCCAGCTCC GATGTGCTCT CAACAAAAGC CGGGAATTCA ACTTGATGTA CGATGGAACC 
AAAGAGGTGC CCATGAACCC TATTAAAATT TACGAAGTGT GCGATATCCC GCAGTCCCAG 
GGATCAATCA TTAATCCAGG GTCCACTGGC TCTGCTCCCT GGGATGAGAA AGATAATGAC 
CTTGATGATG AGGAAGAAGA AGAATTAAAT CCATCTCAGC ATATCCCCAT ACAGGACACT 
TTTCCGTTTC TTAATATTAA TGATTCCCCG ATGGCTCCAG CCAGTGTAGA AAGTTGCAGC 
ACTGAAGCGG CGTGGTCCAA GAATGAACCG GTAGATATGG AGATGCCCCC AAGTACTCTG 
CAGCATGACT TCTTCAGCTC CCCTGAGCTC TGGATTAGCT CTCTCCCAAT GACAGATCTA 
GAAATCAAGT TTGAATATCG AGGAAAAGAG ACTGGGCCAA CCTCAACTGT CAGCAATCCC 
CAGGGATGCA GGCTGTTCTA CGGAGAATTG GGTCCTATGC CAGACCAGGA AGAGCTGTTT 
GGACCTATTA GTCTGGAGCA AGTAAAGTTT CCAGGAACAG AACAGATCAC CAATGAAAAG 
CAAAAGATTT TCACAAGTCG GCTGCTAGAT GTCATGGACA GGGGACTGAT TCTGGAGGTC 
AGTGGCCATG CCATCTATGC CATCCGGCTA TGTCAGTGCA AGGTGTACTG GTCTGGACCA 
TGTGCCCCTT CGTCCACCAC ACCAAACCTG ATTGAGAGGC AAAAGAAAGT CAAACTCTTC 
TGTCTGGAAA CATTTCTAAG TGAGCTGATT GCTCATCAGA AAGGACAGAT GGAAAAACAG 
CCCCCCTTTG AGATCTACTT CTGTTTTGGG GAAGAATGGC CGGATGGAAA ACCTAGAGAT 
AGAAAGCTGA TTGTGGTGCA GGTCATTCCA ATTGTAGCTC GGATGATTTA TGAAATGTTT 
TCGGGCGACT TCACACGTTC CTTCGACAGT GGCAGCGTGA GGCTTCAGAT CTCCACGCCG 
GATATTAAGG ACAACATCGT TGCCCATTTG AAACAGCTGT ACCGCCTCCT GCAGACCCAC 
CAAGATACCT GGCCAATGCC GGCCCCAAAT ATGCAGATTA CTCAACCGCT CCCAGCACAA 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006268141.1
CDS	402..1784
Translation	MALHPRRVRLKPWLVAQVDSGLYPGLVWLNREVKRFQIPWKHATRHSPQHEEENTIFKAWAVETGKYQEGVDEPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPIKIYEVCDIPQSQGSIINPGSTGSAPWDEKDNDLDDEEEEELNPSQHIPIQDTFPFLNINDSPMAPASVESCSTEAAWSKNEPVDMEMPPSTLQHDFFSSPELWISSLPMTDLEIKFEYRGKETGPTSTVSNPQGCRLFYGELGPMPDQEELFGPISLEQVKFPGTEQITNEKQKIFTSRLLDVMDRGLILEVSGHAIYAIRLCQCKVYWSGPCAPSSTTPNLIERQKKVKLFCLETFLSELIAHQKGQMEKQPPFEIYFCFGEEWPDGKPRDRKLIVVQVIPIVARMIYEMFSGDFTRSFDSGSVRLQISTPDIKDNIVAHLKQLYRLLQTHQDTWPMPAPNMQITQPLPAQ

Target ORF information:

RefSeq Version	XM_006268079.3
Organism	Alligator mississippiensis(American alligator)
Definition	Alligator mississippiensis interferon regulatory factor 6 (IRF6), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006268079.3

ORF Insert Sequence:

ATGGCACTGC ACCCACGGAG AGTTCGTTTG AAACCCTGGC TGGTAGCGCA GGTAGACAGT 
GGTCTGTACC CAGGCCTTGT CTGGCTAAAT CGGGAAGTAA AGCGATTTCA GATCCCCTGG 
AAGCATGCAA CACGACACAG TCCTCAGCAC GAAGAGGAGA ACACCATCTT TAAGGCATGG 
GCCGTGGAAA CGGGAAAGTA TCAGGAAGGA GTCGATGAGC CAGACCCTGC AAAATGGAAA 
GCCCAGCTCC GATGTGCTCT CAACAAAAGC CGGGAATTCA ACTTGATGTA CGATGGAACC 
AAAGAGGTGC CCATGAACCC TATTAAAATT TACGAAGTGT GCGATATCCC GCAGTCCCAG 
GGATCAATCA TTAATCCAGG GTCCACTGGC TCTGCTCCCT GGGATGAGAA AGATAATGAC 
CTTGATGATG AGGAAGAAGA AGAATTAAAT CCATCTCAGC ATATCCCCAT ACAGGACACT 
TTTCCGTTTC TTAATATTAA TGATTCCCCG ATGGCTCCAG CCAGTGTAGA AAGTTGCAGC 
ACTGAAGCGG CGTGGTCCAA GAATGAACCG GTAGATATGG AGATGCCCCC AAGTACTCTG 
CAGCATGACT TCTTCAGCTC CCCTGAGCTC TGGATTAGCT CTCTCCCAAT GACAGATCTA 
GAAATCAAGT TTGAATATCG AGGAAAAGAG ACTGGGCCAA CCTCAACTGT CAGCAATCCC 
CAGGGATGCA GGCTGTTCTA CGGAGAATTG GGTCCTATGC CAGACCAGGA AGAGCTGTTT 
GGACCTATTA GTCTGGAGCA AGTAAAGTTT CCAGGAACAG AACAGATCAC CAATGAAAAG 
CAAAAGATTT TCACAAGTCG GCTGCTAGAT GTCATGGACA GGGGACTGAT TCTGGAGGTC 
AGTGGCCATG CCATCTATGC CATCCGGCTA TGTCAGTGCA AGGTGTACTG GTCTGGACCA 
TGTGCCCCTT CGTCCACCAC ACCAAACCTG ATTGAGAGGC AAAAGAAAGT CAAACTCTTC 
TGTCTGGAAA CATTTCTAAG TGAGCTGATT GCTCATCAGA AAGGACAGAT GGAAAAACAG 
CCCCCCTTTG AGATCTACTT CTGTTTTGGG GAAGAATGGC CGGATGGAAA ACCTAGAGAT 
AGAAAGCTGA TTGTGGTGCA GGTCATTCCA ATTGTAGCTC GGATGATTTA TGAAATGTTT 
TCGGGCGACT TCACACGTTC CTTCGACAGT GGCAGCGTGA GGCTTCAGAT CTCCACGCCG 
GATATTAAGG ACAACATCGT TGCCCATTTG AAACAGCTGT ACCGCCTCCT GCAGACCCAC 
CAAGATACCT GGCCAATGCC GGCCCCAAAT ATGCAGATTA CTCAACCGCT CCCAGCACAA 
TGA