LOC102716831 cDNA ORF clone, Oryza brachyantha(malo sina)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC102716831
Entrez Gene ID	102716831
Full Name	DEAD-box ATP-dependent RNA helicase 39
Gene Type	protein-coding
Organism	Oryza brachyantha(malo sina)

mRNA and Protein(s)

mRNA	Protein	Name
XM_006645515.2	XP_006645578.1	LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 39

Pathways from BioSystems
Gene Ontology

The following LOC102716831 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC102716831 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OOr02007	XM_006645515.2 Latest version!	Oryza brachyantha DEAD-box ATP-dependent RNA helicase 39 (LOC102716831), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC102716831 ( XM_006645515.2 ) cDNA ORF clone, Oryza brachyantha(malo sina) -> XP_006645578.1 Oryza brachyantha DEAD-box ATP-dependent RNA helicase 39 (LOC102716831), mRNA.

Price & Availability↑

CloneID	OOr02007
Clone ID Related Accession (Same CDS sequence)	XM_006645515.2
Accession Version	XM_006645515.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2004bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-03-03
Organism	Oryza brachyantha(malo sina)
Product	LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 39
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006267373.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 4, 2016 this sequence version replaced XM_006645515.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza brachyantha Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 12% of CDS bases frameshifts :: corrected 1 indel ##RefSeq-Attributes-END##

ATGGCTGGTT CGCTGGGCTG CGTTCATGGT GCCGCCCTTG GTCGCGTCCT GACGCGAGCG 
AAGATGATGA CCGCGCTGGC GAGGATCCAC GGCGCGAAGA CGGCATTGAC CACCCTCGAC 
GACAGCAGCG GCTCCGGCAC CCCCTTCAAC GCTACCGCCA CCATCGCCGC CGGCACGAGC 
AGTCCGGCGA CGATCACCGA CGTCGGCTTC GTCCAGGACA CCTACGCCGC CGCCGGAAAA 
GCGCCTGCCA CGTCCCGCCA CGAGCTGCTC CTCGAGCGCC TCCGGCTGCG CCACCTCAAG 
GGCCCGTCCA CGGCCCCCGC CAGGCCGTCG GCGCGGGAGA AGGCGGGGAG GGGCGGCGCG 
CAGGACGTGC AGCAGAAGAG GAGGGTCGAG GTGGTGGACA GCTTCGAGGA GCTCGGGCTC 
GGGGAGGAGG TGATGGCCGC GCTCGGGGAG ATGGGGATCT CTAAGCCCAC CGAGATCCAG 
TGCGTCGGCG TGCCCTCCGT CCTGGCTGGC ACCAGTGTCG TGCTTGGCTC GCACACCGGT 
TCCGGGAAGA CGCTCGCCTA CCTGCTCCCG CTTGTACAGC TACTGCGTCG TGATGAAGCA 
GTGTTGGGTA TGTCAATGAA GCCAAGGAGG CCAAGAGCAG TAGTTCTGTG CCCCACAAGG 
GAGCTGACTG AGCAGGTCTT TCGTGTTGCA AAGTCCATAA GCCATCATGC ACGTTTTCGG 
TCAACAATGG TTAGTGGAGG CAGCCGTATA AGACCCCAGG AAGATTCTCT TAACATGCCT 
GTAGACATGG TTTCTCTTAA CATGCCTGTA GACATGGTTG TTGGGACTCC TGGAAGGATT 
CTTGATCATA TCAAGGATGG GAACATGGTT TATGGCGATA TCAAGTATCT GGTCCTTGAT 
GAGGCAGATA CGATGTTTGA TCAAGGTTTT GGACCAGACA TTCGGAAGTT TCTTGCTCCT 
TTGAAGAACC GTGCTGCAAA ACCTGGCGAT CAGGGGTTCC AAACTGTATT AGTTACTGCT 
ACTATGACCA AGGCAGTACA AAAGCTGATA GATGAGGAAT TTGAAGGTAT CGTTCATTTG 
CGGACGTCAA CCTTTCAAAA AAGAGTTGCA ACTGCACGAC ATGACTTCAT CAAACTGTCT 
GGTTCAGAAA ATAAACTAGA GGCGCTCCTG CAGGTTCTTG AGCCAAGCTT AGCAAAGGGA 
AACAAAATCA TGGTGTTCTG TAATACTTTG AATTCAAGTC GTGCGGTGGA CCATTTTCTG 
ACTGAAAATC AGATATCTAC TGTAAACTAC CATGGAGAAG TTCCTGCTGA AGAAAGGGTT 
GAGAACCTTA ACAAGTTCCG GAATGAAGAG GGGGATTGTC CAACATTGGT CTGCACTGAC 
CTAGCTGCTC GAGGCCTAGA CTTGGATGTT GACCATGTCA TCATGTTTGA CTTCCCATCA 
AACTCTATTG ATTACCTCCA CAGAACAGGA AGAACTGCAC GTATGGGAGC AAAAGGGAAA 
GTTACTAGCC TTGTTGCAAA GAAAGATGTG GCTTTAGCAA CACGGATTGA AGAGGCTATC 
AAGAAAAACG AGAGCTTGGA AGCACTGACG ACCAACAATG TCCGAAGGGC GGCCACCAGC 
CCGCATCATG CTAGTACCAA AGGACGACCA AGTGGTCTGA AGGTAGTAAA CCAGAAGGGT 
AGAAGGGGAG TCGCGCTATC GACCAAGTCA TCAAGGGTTG TCAAGGACAC AACCTCATCC 
AGAAGGTCAT CAAGGGTTGT CAAGGACACA ACATCCAGAA GGCGGTCACC GGCTAAGAAC 
CAACCGAAGT CGAAATCGAC ATCGTCTGGG AAGGCGAAGC CAGTGCGATC TGCTAAGCCA 
AGCAAGAGCG GTAGCCCCAA GGTTGCGAAG AGCAGGCCAA GACCAGAGGG ACGGAAAGGG 
GATGCTCTGA ACAAGCTGGG AACTAAGCTC AGTGTGGTCG GATTCAGAGG CCGCAGCTCA 
GGGAAATCGG CGCAAGCATC GTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006645578.1
CDS	1..2004
Translation	MAGSLGCVHGAALGRVLTRAKMMTALARIHGAKTALTTLDDSSGSGTPFNATATIAAGTSSPATITDVGFVQDTYAAAGKAPATSRHELLLERLRLRHLKGPSTAPARPSAREKAGRGGAQDVQQKRRVEVVDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPSVLAGTSVVLGSHTGSGKTLAYLLPLVQLLRRDEAVLGMSMKPRRPRAVVLCPTRELTEQVFRVAKSISHHARFRSTMVSGGSRIRPQEDSLNMPVDMVSLNMPVDMVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGPDIRKFLAPLKNRAAKPGDQGFQTVLVTATMTKAVQKLIDEEFEGIVHLRTSTFQKRVATARHDFIKLSGSENKLEALLQVLEPSLAKGNKIMVFCNTLNSSRAVDHFLTENQISTVNYHGEVPAEERVENLNKFRNEEGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVAKKDVALATRIEEAIKKNESLEALTTNNVRRAATSPHHASTKGRPSGLKVVNQKGRRGVALSTKSSRVVKDTTSSRRSSRVVKDTTSRRRSPAKNQPKSKSTSSGKAKPVRSAKPSKSGSPKVAKSRPRPEGRKGDALNKLGTKLSVVGFRGRSSGKSAQAS

Target ORF information:

RefSeq Version	XM_006645515.2
Organism	Oryza brachyantha(malo sina)
Definition	Oryza brachyantha DEAD-box ATP-dependent RNA helicase 39 (LOC102716831), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006645515.2

ORF Insert Sequence:

ATGGCTGGTT CGCTGGGCTG CGTTCATGGT GCCGCCCTTG GTCGCGTCCT GACGCGAGCG 
AAGATGATGA CCGCGCTGGC GAGGATCCAC GGCGCGAAGA CGGCATTGAC CACCCTCGAC 
GACAGCAGCG GCTCCGGCAC CCCCTTCAAC GCTACCGCCA CCATCGCCGC CGGCACGAGC 
AGTCCGGCGA CGATCACCGA CGTCGGCTTC GTCCAGGACA CCTACGCCGC CGCCGGAAAA 
GCGCCTGCCA CGTCCCGCCA CGAGCTGCTC CTCGAGCGCC TCCGGCTGCG CCACCTCAAG 
GGCCCGTCCA CGGCCCCCGC CAGGCCGTCG GCGCGGGAGA AGGCGGGGAG GGGCGGCGCG 
CAGGACGTGC AGCAGAAGAG GAGGGTCGAG GTGGTGGACA GCTTCGAGGA GCTCGGGCTC 
GGGGAGGAGG TGATGGCCGC GCTCGGGGAG ATGGGGATCT CTAAGCCCAC CGAGATCCAG 
TGCGTCGGCG TGCCCTCCGT CCTGGCTGGC ACCAGTGTCG TGCTTGGCTC GCACACCGGT 
TCCGGGAAGA CGCTCGCCTA CCTGCTCCCG CTTGTACAGC TACTGCGTCG TGATGAAGCA 
GTGTTGGGTA TGTCAATGAA GCCAAGGAGG CCAAGAGCAG TAGTTCTGTG CCCCACAAGG 
GAGCTGACTG AGCAGGTCTT TCGTGTTGCA AAGTCCATAA GCCATCATGC ACGTTTTCGG 
TCAACAATGG TTAGTGGAGG CAGCCGTATA AGACCCCAGG AAGATTCTCT TAACATGCCT 
GTAGACATGG TTTCTCTTAA CATGCCTGTA GACATGGTTG TTGGGACTCC TGGAAGGATT 
CTTGATCATA TCAAGGATGG GAACATGGTT TATGGCGATA TCAAGTATCT GGTCCTTGAT 
GAGGCAGATA CGATGTTTGA TCAAGGTTTT GGACCAGACA TTCGGAAGTT TCTTGCTCCT 
TTGAAGAACC GTGCTGCAAA ACCTGGCGAT CAGGGGTTCC AAACTGTATT AGTTACTGCT 
ACTATGACCA AGGCAGTACA AAAGCTGATA GATGAGGAAT TTGAAGGTAT CGTTCATTTG 
CGGACGTCAA CCTTTCAAAA AAGAGTTGCA ACTGCACGAC ATGACTTCAT CAAACTGTCT 
GGTTCAGAAA ATAAACTAGA GGCGCTCCTG CAGGTTCTTG AGCCAAGCTT AGCAAAGGGA 
AACAAAATCA TGGTGTTCTG TAATACTTTG AATTCAAGTC GTGCGGTGGA CCATTTTCTG 
ACTGAAAATC AGATATCTAC TGTAAACTAC CATGGAGAAG TTCCTGCTGA AGAAAGGGTT 
GAGAACCTTA ACAAGTTCCG GAATGAAGAG GGGGATTGTC CAACATTGGT CTGCACTGAC 
CTAGCTGCTC GAGGCCTAGA CTTGGATGTT GACCATGTCA TCATGTTTGA CTTCCCATCA 
AACTCTATTG ATTACCTCCA CAGAACAGGA AGAACTGCAC GTATGGGAGC AAAAGGGAAA 
GTTACTAGCC TTGTTGCAAA GAAAGATGTG GCTTTAGCAA CACGGATTGA AGAGGCTATC 
AAGAAAAACG AGAGCTTGGA AGCACTGACG ACCAACAATG TCCGAAGGGC GGCCACCAGC 
CCGCATCATG CTAGTACCAA AGGACGACCA AGTGGTCTGA AGGTAGTAAA CCAGAAGGGT 
AGAAGGGGAG TCGCGCTATC GACCAAGTCA TCAAGGGTTG TCAAGGACAC AACCTCATCC 
AGAAGGTCAT CAAGGGTTGT CAAGGACACA ACATCCAGAA GGCGGTCACC GGCTAAGAAC 
CAACCGAAGT CGAAATCGAC ATCGTCTGGG AAGGCGAAGC CAGTGCGATC TGCTAAGCCA 
AGCAAGAGCG GTAGCCCCAA GGTTGCGAAG AGCAGGCCAA GACCAGAGGG ACGGAAAGGG 
GATGCTCTGA ACAAGCTGGG AACTAAGCTC AGTGTGGTCG GATTCAGAGG CCGCAGCTCA 
GGGAAATCGG CGCAAGCATC GTAG