| Gene Symbol | TRB1 |
| Entrez Gene ID | 841418 |
| Full Name | telomere repeat binding factor 1 |
| Synonyms | ATTRB1,F2J10.16,F2J10_16,TELOMERE REPEAT BINDING FACTOR 1,telomere repeat binding factor 1 |
| Gene Type | protein-coding |
| Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » TRB1 cDNA ORF clone
| Gene Symbol | TRB1 |
| Entrez Gene ID | 841418 |
| Full Name | telomere repeat binding factor 1 |
| Synonyms | ATTRB1,F2J10.16,F2J10_16,TELOMERE REPEAT BINDING FACTOR 1,telomere repeat binding factor 1 |
| Gene Type | protein-coding |
| Organism | Arabidopsis thaliana(thale cress) |
| mRNA | Protein | Name |
|---|---|---|
| NM_179458.3 | NP_849789.1 | telomere repeat binding factor 1 |
| NM_202269.2 | NP_973998.1 | telomere repeat binding factor 1 |
| NM_103882.4 | NP_564559.1 | telomere repeat binding factor 1 |
| Arabidopsis thaliana (thale cress) | TRB1 | NP_564559.1 |
| Oryza sativa (rice) | Os01g0589300 | NP_001043442.1 |
| Oryza sativa (rice) | Os12g0613300 | NP_001067263.1 |
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.
Theologis A, Ecker JR, Palm CJ, Federspiel NA, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman CL, Brooks SY, Buehler E, Chan A, Chao Q, Chen H, Cheuk RF, Chin CW, Chung MK, Conn L, Conway AB, Conway AR, Creasy TH, Dewar K, Dunn P, Etgu P, Feldblyum TV, Feng J, Fong B, Fujii CY, Gill JE, Goldsmith AD, Haas B, Hansen NF, Hughes B, Huizar L, Hunter JL, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim CJ, Koo HL, Kremenetskaia I, Kurtz DB, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee JM, Lenz CA, Li JH, Li Y, Lin X, Liu SX, Liu ZA, Luros JS, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman WC, Osborne BI, Pai G, Peterson J, Pham PK, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg SL, Schwartz JR, Shinn P, Southwick AM, Sun H, Tallon LJ, Tambunga G, Toriumi MJ, Town CD, Utterback T, Van Aken S, Vaysberg M, Vysotskaia VS, Walker M, Wu D, Yu G, Fraser CM, Venter JC, Davis RW
Nature408(6814)816-20(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
TRB1 shows a specific genome-wide distribution pattern which suggests its role in regulation of genes involved in biogenesis of the translational machinery, in addition to its preferential telomeric localization.
Title: Telomere binding protein TRB1 is associated with promoters of translation machinery genes in vivo.
AtTRB1 is highly dynamic during interphase. The histone-like domain and the Myb domain can both direct the protein to the nucleolus.
Title: AtTRB1, a telomeric DNA-binding protein from Arabidopsis, is concentrated in the nucleolus and shows highly dynamic association with chromatin.
DNA-protein interaction of the full-length and truncated variants of AtTRB1, a Single-Myb-Histone-family member with a typical structure
Title: Functional characterization of domains in AtTRB1, a putative telomere-binding protein in Arabidopsis thaliana.
The domains responsible for that interaction AtTRB1 and AtPOT1b were identified.
Title: Mapping of interaction domains of putative telomere-binding proteins AtTRB1 and AtPOT1b from Arabidopsis thaliana.
The following TRB1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TRB1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OAb25967 | |
| Clone ID Related Accession (Same CDS sequence) | NM_179458.3 , NM_202269.2 , NM_103882.4 | |
| Accession Version | NM_179458.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 903bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-02-13 | |
| Organism | Arabidopsis thaliana(thale cress) | |
| Product | telomere repeat binding factor 1 | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). On Sep 12, 2016 this sequence version replaced NM_179458.2. | |
1 | ATGGGTGCTC CTAAGCAGAA ATGGACTCAA GAAGAAGAGT CAGCTTTAAA GTCTGGAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_849789.1 |
| CDS | 228..1130 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_179458.3 |
1 | ATGGGTGCTC CTAAGCAGAA ATGGACTCAA GAAGAAGAGT CAGCTTTAAA GTCTGGAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OAb25967 | |
| Clone ID Related Accession (Same CDS sequence) | NM_179458.3 , NM_202269.2 , NM_103882.4 | |
| Accession Version | NM_202269.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 903bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-02-13 | |
| Organism | Arabidopsis thaliana(thale cress) | |
| Product | telomere repeat binding factor 1 | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). On Apr 18, 2007 this sequence version replaced NM_202269.1. | |
1 | ATGGGTGCTC CTAAGCAGAA ATGGACTCAA GAAGAAGAGT CAGCTTTAAA GTCTGGAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_973998.1 |
| CDS | 304..1206 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_202269.2 |
1 | ATGGGTGCTC CTAAGCAGAA ATGGACTCAA GAAGAAGAGT CAGCTTTAAA GTCTGGAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OAb25967 | |
| Clone ID Related Accession (Same CDS sequence) | NM_179458.3 , NM_202269.2 , NM_103882.4 | |
| Accession Version | NM_103882.4 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 903bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-02-13 | |
| Organism | Arabidopsis thaliana(thale cress) | |
| Product | telomere repeat binding factor 1 | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). On Sep 12, 2016 this sequence version replaced NM_103882.3. | |
1 | ATGGGTGCTC CTAAGCAGAA ATGGACTCAA GAAGAAGAGT CAGCTTTAAA GTCTGGAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_564559.1 |
| CDS | 215..1117 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_103882.4 |
1 | ATGGGTGCTC CTAAGCAGAA ATGGACTCAA GAAGAAGAGT CAGCTTTAAA GTCTGGAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. |