opn5 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Gene
Clones
gRNAs

Summary

Gene Symbol	opn5
Entrez Gene ID	100497642
Full Name	opsin 5
Synonyms	neuropsin
General protein information	Preferred Names opsin 5 Names opsin-5
Gene Type	protein-coding
Organism	Xenopus tropicalis(tropical clawed frog)

mRNA and Protein(s)

mRNA	Protein	Name
XM_002935990.5	XP_002936036.1	opsin-5
XM_002935990.4	XP_002936036.1	opsin-5

Pathways from BioSystems

Homologies

Rattus norvegicus (Norway rat)	Opn5	NP_861437.1
Homo sapiens (human)	OPN5	NP_859528.1
	OPN5	XP_001104044.1
Bos taurus (cattle)	OPN5	NP_001193009.1
Canis lupus familiaris (dog)	OPN5	XP_003639476.1
Mus musculus (house mouse)	Opn5	NP_861418.2
Gallus gallus (chicken)	OPN5	NP_001124215.1
Danio rerio (zebrafish)	opn5	NP_001186975.1
Xenopus tropicalis (tropical clawed frog)	opn5	XP_002936036.1
Pan troglodytes (chimpanzee)	OPN5	XP_001146167.1

Gene Ontology

The following opn5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the opn5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OXa16649	XM_002935990.5 Latest version!	Xenopus tropicalis opsin 5 (opn5), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00
View Old Accession Versions >>
OXa16649	XM_002935990.4	Xenopus tropicalis opsin 5 (opn5), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

opn5 ( XM_002935990.4 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_002936036.1 Xenopus tropicalis opsin 5 (opn5), mRNA.

Price & Availability↑

CloneID	OXa16649
Clone ID Related Accession (Same CDS sequence)	XM_002935990.5 , XM_002935990.4
Accession Version	XM_002935990.4	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1032bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-09-07
Organism	Xenopus tropicalis(tropical clawed frog)
Product	opsin-5
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030681.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_002935990.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCAGGAA ACAGCAGTTA CCGGGAGGAG AGCGGTTACA TCCCCCATTA TGAGAGAGAC 
TCCGACCCCT TTGCCTCCAA ACTCTCCAGA GAAGCTGATA TCTTTGCTGG GGTTTATCTA 
ATGGCCATAG GTATCCTGTC GACGCTAGGG AATGGCTACG TTATATATAT GGCTTGCAGC 
AGGAAAAAGA AACTGCGCCC GGCTGAGATA ATGACAATCA ATTTGGCTGT GTGTGATCTG 
GGGATCTCAG TAACAGGAAA GCCCTTTGCC ATCGTGTCCT GCTTCAGTCA CCGCTGGGTG 
TTTGGCTGGA ACGCTTGCCG CTGGTACGGA TGGGCTGGAT TTTTCTTTGG CTGCGGAAGC 
CTCATTACCC TGACAGTAGT GAGCCTGGAC AGGTACCTGA AGATCTGCCA TCTGCGATAC 
GGCACTTGGC TGAAGCGACG CCACGCTTTC ATTGCCTTGG CAGTTATCTG GGCCTATGCT 
ACCCTGTGGG CTACCTTGCC ATTGGTCGGG GTGGGAAATT ACGCTCCGGA ACCCTTTGGC 
ACCACGTGTA CTTTGGACTG GTGGTTGGCA CAGGCCTCTG TTAAAGGGCA GATATTTGTC 
CTGTCCATGC TGTTCTTCTG CCTCTTGTTT CCCACCATGG TGATTGTCTT CTCCTACGCG 
AAGATCATCG CCAAAGTCAA GTCTTCGGCC AAAGAAGTCG CTCACTTCGA CACCAGGAAC 
CAAAATAACC ACACGCTGGA AATAAAACTG ACAAAGGTGG CAATGTTGAT CTGTGCAGGT 
TTCCTCATTG CGTGGTTTCC ATACGCGGTG GTGTCCGTAT GGTCGGCATT TGGGCAGCCG 
GACTCTATTC CGATTGAACT TTCCGTGGTG CCCACCATGA TGGCAAAATC GGCGTCTATG 
TATAATCCCA TCATTTATCA AGTCATTGAC TGCAAACCTG CTTGCTGCAA AAAGGACAAG 
TCGTTGCAGA ATACGACTTC TAGGGTCTAT ACAATAAGCA CCTTCAGGAA GTCGACAACC 
TCAGCTCGGT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002936036.1
CDS	301..1332
Translation	MAGNSSYREESGYIPHYERDSDPFASKLSREADIFAGVYLMAIGILSTLGNGYVIYMACSRKKKLRPAEIMTINLAVCDLGISVTGKPFAIVSCFSHRWVFGWNACRWYGWAGFFFGCGSLITLTVVSLDRYLKICHLRYGTWLKRRHAFIALAVIWAYATLWATLPLVGVGNYAPEPFGTTCTLDWWLAQASVKGQIFVLSMLFFCLLFPTMVIVFSYAKIIAKVKSSAKEVAHFDTRNQNNHTLEIKLTKVAMLICAGFLIAWFPYAVVSVWSAFGQPDSIPIELSVVPTMMAKSASMYNPIIYQVIDCKPACCKKDKSLQNTTSRVYTISTFRKSTTSAR

Target ORF information:

RefSeq Version	XM_002935990.4
Organism	Xenopus tropicalis(tropical clawed frog)
Definition	Xenopus tropicalis opsin 5 (opn5), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002935990.4

ORF Insert Sequence:

ATGGCAGGAA ACAGCAGTTA CCGGGAGGAG AGCGGTTACA TCCCCCATTA TGAGAGAGAC 
TCCGACCCCT TTGCCTCCAA ACTCTCCAGA GAAGCTGATA TCTTTGCTGG GGTTTATCTA 
ATGGCCATAG GTATCCTGTC GACGCTAGGG AATGGCTACG TTATATATAT GGCTTGCAGC 
AGGAAAAAGA AACTGCGCCC GGCTGAGATA ATGACAATCA ATTTGGCTGT GTGTGATCTG 
GGGATCTCAG TAACAGGAAA GCCCTTTGCC ATCGTGTCCT GCTTCAGTCA CCGCTGGGTG 
TTTGGCTGGA ACGCTTGCCG CTGGTACGGA TGGGCTGGAT TTTTCTTTGG CTGCGGAAGC 
CTCATTACCC TGACAGTAGT GAGCCTGGAC AGGTACCTGA AGATCTGCCA TCTGCGATAC 
GGCACTTGGC TGAAGCGACG CCACGCTTTC ATTGCCTTGG CAGTTATCTG GGCCTATGCT 
ACCCTGTGGG CTACCTTGCC ATTGGTCGGG GTGGGAAATT ACGCTCCGGA ACCCTTTGGC 
ACCACGTGTA CTTTGGACTG GTGGTTGGCA CAGGCCTCTG TTAAAGGGCA GATATTTGTC 
CTGTCCATGC TGTTCTTCTG CCTCTTGTTT CCCACCATGG TGATTGTCTT CTCCTACGCG 
AAGATCATCG CCAAAGTCAA GTCTTCGGCC AAAGAAGTCG CTCACTTCGA CACCAGGAAC 
CAAAATAACC ACACGCTGGA AATAAAACTG ACAAAGGTGG CAATGTTGAT CTGTGCAGGT 
TTCCTCATTG CGTGGTTTCC ATACGCGGTG GTGTCCGTAT GGTCGGCATT TGGGCAGCCG 
GACTCTATTC CGATTGAACT TTCCGTGGTG CCCACCATGA TGGCAAAATC GGCGTCTATG 
TATAATCCCA TCATTTATCA AGTCATTGAC TGCAAACCTG CTTGCTGCAA AAAGGACAAG 
TCGTTGCAGA ATACGACTTC TAGGGTCTAT ACAATAAGCA CCTTCAGGAA GTCGACAACC 
TCAGCTCGGT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

opn5 ( XM_002935990.5 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_002936036.1 Xenopus tropicalis opsin 5 (opn5), mRNA.

Price & Availability↑

CloneID	OXa16649
Clone ID Related Accession (Same CDS sequence)	XM_002935990.5 , XM_002935990.4
Accession Version	XM_002935990.5 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1032bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-17
Organism	Xenopus tropicalis(tropical clawed frog)
Product	opsin-5
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030681.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_002935990.4. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCAGGAA ACAGCAGTTA CCGGGAGGAG AGCGGTTACA TCCCCCATTA TGAGAGAGAC 
TCCGACCCCT TTGCCTCCAA ACTCTCCAGA GAAGCTGATA TCTTTGCTGG GGTTTATCTA 
ATGGCCATAG GTATCCTGTC GACGCTAGGG AATGGCTACG TTATATATAT GGCTTGCAGC 
AGGAAAAAGA AACTGCGCCC GGCTGAGATA ATGACAATCA ATTTGGCTGT GTGTGATCTG 
GGGATCTCAG TAACAGGAAA GCCCTTTGCC ATCGTGTCCT GCTTCAGTCA CCGCTGGGTG 
TTTGGCTGGA ACGCTTGCCG CTGGTACGGA TGGGCTGGAT TTTTCTTTGG CTGCGGAAGC 
CTCATTACCC TGACAGTAGT GAGCCTGGAC AGGTACCTGA AGATCTGCCA TCTGCGATAC 
GGCACTTGGC TGAAGCGACG CCACGCTTTC ATTGCCTTGG CAGTTATCTG GGCCTATGCT 
ACCCTGTGGG CTACCTTGCC ATTGGTCGGG GTGGGAAATT ACGCTCCGGA ACCCTTTGGC 
ACCACGTGTA CTTTGGACTG GTGGTTGGCA CAGGCCTCTG TTAAAGGGCA GATATTTGTC 
CTGTCCATGC TGTTCTTCTG CCTCTTGTTT CCCACCATGG TGATTGTCTT CTCCTACGCG 
AAGATCATCG CCAAAGTCAA GTCTTCGGCC AAAGAAGTCG CTCACTTCGA CACCAGGAAC 
CAAAATAACC ACACGCTGGA AATAAAACTG ACAAAGGTGG CAATGTTGAT CTGTGCAGGT 
TTCCTCATTG CGTGGTTTCC ATACGCGGTG GTGTCCGTAT GGTCGGCATT TGGGCAGCCG 
GACTCTATTC CGATTGAACT TTCCGTGGTG CCCACCATGA TGGCAAAATC GGCGTCTATG 
TATAATCCCA TCATTTATCA AGTCATTGAC TGCAAACCTG CTTGCTGCAA AAAGGACAAG 
TCGTTGCAGA ATACGACTTC TAGGGTCTAT ACAATAAGCA CCTTCAGGAA GTCGACAACC 
TCAGCTCGGT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002936036.1
CDS	316..1347
Translation	MAGNSSYREESGYIPHYERDSDPFASKLSREADIFAGVYLMAIGILSTLGNGYVIYMACSRKKKLRPAEIMTINLAVCDLGISVTGKPFAIVSCFSHRWVFGWNACRWYGWAGFFFGCGSLITLTVVSLDRYLKICHLRYGTWLKRRHAFIALAVIWAYATLWATLPLVGVGNYAPEPFGTTCTLDWWLAQASVKGQIFVLSMLFFCLLFPTMVIVFSYAKIIAKVKSSAKEVAHFDTRNQNNHTLEIKLTKVAMLICAGFLIAWFPYAVVSVWSAFGQPDSIPIELSVVPTMMAKSASMYNPIIYQVIDCKPACCKKDKSLQNTTSRVYTISTFRKSTTSAR

Target ORF information:

RefSeq Version	XM_002935990.5
Organism	Xenopus tropicalis(tropical clawed frog)
Definition	Xenopus tropicalis opsin 5 (opn5), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002935990.5

ORF Insert Sequence:

ATGGCAGGAA ACAGCAGTTA CCGGGAGGAG AGCGGTTACA TCCCCCATTA TGAGAGAGAC 
TCCGACCCCT TTGCCTCCAA ACTCTCCAGA GAAGCTGATA TCTTTGCTGG GGTTTATCTA 
ATGGCCATAG GTATCCTGTC GACGCTAGGG AATGGCTACG TTATATATAT GGCTTGCAGC 
AGGAAAAAGA AACTGCGCCC GGCTGAGATA ATGACAATCA ATTTGGCTGT GTGTGATCTG 
GGGATCTCAG TAACAGGAAA GCCCTTTGCC ATCGTGTCCT GCTTCAGTCA CCGCTGGGTG 
TTTGGCTGGA ACGCTTGCCG CTGGTACGGA TGGGCTGGAT TTTTCTTTGG CTGCGGAAGC 
CTCATTACCC TGACAGTAGT GAGCCTGGAC AGGTACCTGA AGATCTGCCA TCTGCGATAC 
GGCACTTGGC TGAAGCGACG CCACGCTTTC ATTGCCTTGG CAGTTATCTG GGCCTATGCT 
ACCCTGTGGG CTACCTTGCC ATTGGTCGGG GTGGGAAATT ACGCTCCGGA ACCCTTTGGC 
ACCACGTGTA CTTTGGACTG GTGGTTGGCA CAGGCCTCTG TTAAAGGGCA GATATTTGTC 
CTGTCCATGC TGTTCTTCTG CCTCTTGTTT CCCACCATGG TGATTGTCTT CTCCTACGCG 
AAGATCATCG CCAAAGTCAA GTCTTCGGCC AAAGAAGTCG CTCACTTCGA CACCAGGAAC 
CAAAATAACC ACACGCTGGA AATAAAACTG ACAAAGGTGG CAATGTTGAT CTGTGCAGGT 
TTCCTCATTG CGTGGTTTCC ATACGCGGTG GTGTCCGTAT GGTCGGCATT TGGGCAGCCG 
GACTCTATTC CGATTGAACT TTCCGTGGTG CCCACCATGA TGGCAAAATC GGCGTCTATG 
TATAATCCCA TCATTTATCA AGTCATTGAC TGCAAACCTG CTTGCTGCAA AAAGGACAAG 
TCGTTGCAGA ATACGACTTC TAGGGTCTAT ACAATAAGCA CCTTCAGGAA GTCGACAACC 
TCAGCTCGGT GA