LOC100242647 cDNA ORF clone, Vitis vinifera(wine grape)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC100242647
Entrez Gene ID	100242647
Full Name	pentatricopeptide repeat-containing protein At2g22070-like
Gene Type	protein-coding
Organism	Vitis vinifera(wine grape)

mRNA and Protein(s)

mRNA	Protein	Name
XM_019225212.1	XP_019080757.1	pentatricopeptide repeat-containing protein At2g22070-like isoform X2
XM_019225211.1	XP_019080756.1	pentatricopeptide repeat-containing protein At2g22070-like isoform X1

Pathways from BioSystems
Gene Ontology

The following LOC100242647 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100242647 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OVa42238	XM_019225211.1 Latest version!	Vitis vinifera pentatricopeptide repeat-containing protein At2g22070-like (LOC100242647), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OVa42239	XM_019225212.1 Latest version!	Vitis vinifera pentatricopeptide repeat-containing protein At2g22070-like (LOC100242647), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC100242647 ( XM_019225211.1 ) cDNA ORF clone, Vitis vinifera(wine grape) -> XP_019080756.1 Vitis vinifera pentatricopeptide repeat-containing protein At2g22070-like (LOC100242647), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OVa42238
Clone ID Related Accession (Same CDS sequence)	XM_019225211.1
Accession Version	XM_019225211.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1338bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-11-21
Organism	Vitis vinifera(wine grape)
Product	pentatricopeptide repeat-containing protein At2g22070-like isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012020.3) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Vitis vinifera Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGATAGGGC AGTTGGGGTT TTCAAGGACG TTCTTAGGGA GAAAACGGTC ATTCCCAATG 
AAGTTCTTTG ATGAAGGTGT CAAGCTGTTT CAGTGTGTGG GGGATAGAGA TGTTGTAACA 
TGGAATGTAC TGGTTATGGG GTTTGTCCAA AATGACAAAT TTGAAGAAGC GTGCAATTAT 
TTTTGGGTCA TGAGGAGGGA AGGGATTTTA CCTGATGAGG CCTCATTCTC TACTGTTCTT 
CATTCTTCCG CTAGTCTGGC TGCATTACAT CAAGGCACTG CAATCCATGA TCAGATAATA 
AAATTAGGGT ATGTGAAGAA TATGTGCATT TTGGGATCTT TAATTACAAT GTATGCAAAA 
TGTGGGAGCC TGGTTGATGC TTATCAAGTC TTTGAAGGGA TTGAGGATCA CAATGTGATC 
AGTTGGACAG CCATGATCTC AGCTTACCAG CTGCATGGCT GTGCAAACCA AGTGATTGAA 
TTGTTTGAGC ATATGCTAAG TGAGGGGATT GAACCGAGTC ATGTTACTTT TGTCTGTGTT 
CTATCAGCTT GTAGCCATAC TGGGCGTGTT GAAGAGGGAC TTGCTCACTT CAATTCCATG 
AAGAAAATTC ATGATATGAA CCCTGGGCCC GAACACTACG CCTGCATGGT TGACTTGCTT 
GGTCGTGCTG GTTGGTTGGA TGAAGCTAAG AGGTTTATAG AATCAATGCC AATGAAGCCC 
ACCCCATCTG TCTGGGGAGC TCTGCTTGGG GCTTGCAGGA AATACGGCAA TCTGAAAATG 
GGAAGAGAAG CTGCAGAGAG ACTTTTTGAG ATGGAGCCAT ATAATCCGGG AAACTACGTG 
CTGCTTGCTA ACATGTGCAC ACGCAGTGGA AGGCTGGAAG AAGCTAATGA GGTGAGGAGA 
TTGATGGGTG TCAATGGGGT AAGAAAGGAA CCTGGCTGTA GCTGGATTGA TGTTAAGAAC 
ATGACATTTG TGTTCACTGC ACATGATAGA TCACATTCAA GTTCGGATGA GATCTATAAG 
ATGCTAGAGA AGTTGGAGAA ATTGGTGAAG AAGAAAGGGT ATGTGGCTGA AACTGAATTT 
GTCACTAACC ATCTGGAAGA GAACGAGGAG GAGCAGGGCT TGTGGTATCA CAGTGAGAAA 
CTAGCCCTTG CATTTGGACT ACTAACCCTT CCTATCGATT CTCCAATTAG AATAAAGAAG 
AACCTGAGGA CTTGTGGTCA TTGTCATACA GTTATGAAAC TTGCTTCAAA GATTTTTGAC 
AGAGAGATTA TTGTCAGGGA TATCAATCGG TTCCACCGGT TTGCAGATGG TTTTTGTTCC 
TGTGGAGATT ACTGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_019080756.1
CDS	1666..3003
Translation	MIGQLGFSRTFLGRKRSFPMKFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW

Target ORF information:

RefSeq Version	XM_019225211.1
Organism	Vitis vinifera(wine grape)
Definition	Vitis vinifera pentatricopeptide repeat-containing protein At2g22070-like (LOC100242647), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_019225211.1

ORF Insert Sequence:

ATGATAGGGC AGTTGGGGTT TTCAAGGACG TTCTTAGGGA GAAAACGGTC ATTCCCAATG 
AAGTTCTTTG ATGAAGGTGT CAAGCTGTTT CAGTGTGTGG GGGATAGAGA TGTTGTAACA 
TGGAATGTAC TGGTTATGGG GTTTGTCCAA AATGACAAAT TTGAAGAAGC GTGCAATTAT 
TTTTGGGTCA TGAGGAGGGA AGGGATTTTA CCTGATGAGG CCTCATTCTC TACTGTTCTT 
CATTCTTCCG CTAGTCTGGC TGCATTACAT CAAGGCACTG CAATCCATGA TCAGATAATA 
AAATTAGGGT ATGTGAAGAA TATGTGCATT TTGGGATCTT TAATTACAAT GTATGCAAAA 
TGTGGGAGCC TGGTTGATGC TTATCAAGTC TTTGAAGGGA TTGAGGATCA CAATGTGATC 
AGTTGGACAG CCATGATCTC AGCTTACCAG CTGCATGGCT GTGCAAACCA AGTGATTGAA 
TTGTTTGAGC ATATGCTAAG TGAGGGGATT GAACCGAGTC ATGTTACTTT TGTCTGTGTT 
CTATCAGCTT GTAGCCATAC TGGGCGTGTT GAAGAGGGAC TTGCTCACTT CAATTCCATG 
AAGAAAATTC ATGATATGAA CCCTGGGCCC GAACACTACG CCTGCATGGT TGACTTGCTT 
GGTCGTGCTG GTTGGTTGGA TGAAGCTAAG AGGTTTATAG AATCAATGCC AATGAAGCCC 
ACCCCATCTG TCTGGGGAGC TCTGCTTGGG GCTTGCAGGA AATACGGCAA TCTGAAAATG 
GGAAGAGAAG CTGCAGAGAG ACTTTTTGAG ATGGAGCCAT ATAATCCGGG AAACTACGTG 
CTGCTTGCTA ACATGTGCAC ACGCAGTGGA AGGCTGGAAG AAGCTAATGA GGTGAGGAGA 
TTGATGGGTG TCAATGGGGT AAGAAAGGAA CCTGGCTGTA GCTGGATTGA TGTTAAGAAC 
ATGACATTTG TGTTCACTGC ACATGATAGA TCACATTCAA GTTCGGATGA GATCTATAAG 
ATGCTAGAGA AGTTGGAGAA ATTGGTGAAG AAGAAAGGGT ATGTGGCTGA AACTGAATTT 
GTCACTAACC ATCTGGAAGA GAACGAGGAG GAGCAGGGCT TGTGGTATCA CAGTGAGAAA 
CTAGCCCTTG CATTTGGACT ACTAACCCTT CCTATCGATT CTCCAATTAG AATAAAGAAG 
AACCTGAGGA CTTGTGGTCA TTGTCATACA GTTATGAAAC TTGCTTCAAA GATTTTTGAC 
AGAGAGATTA TTGTCAGGGA TATCAATCGG TTCCACCGGT TTGCAGATGG TTTTTGTTCC 
TGTGGAGATT ACTGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC100242647 ( XM_019225212.1 ) cDNA ORF clone, Vitis vinifera(wine grape) -> XP_019080757.1 Vitis vinifera pentatricopeptide repeat-containing protein At2g22070-like (LOC100242647), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OVa42239
Clone ID Related Accession (Same CDS sequence)	XM_019225212.1
Accession Version	XM_019225212.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1203bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-11-21
Organism	Vitis vinifera(wine grape)
Product	pentatricopeptide repeat-containing protein At2g22070-like isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012020.3) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Vitis vinifera Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGGGTTTG TCCAAAATGA CAAATTTGAA GAAGCGTGCA ATTATTTTTG GGTCATGAGG 
AGGGAAGGGA TTTTACCTGA TGAGGCCTCA TTCTCTACTG TTCTTCATTC TTCCGCTAGT 
CTGGCTGCAT TACATCAAGG CACTGCAATC CATGATCAGA TAATAAAATT AGGGTATGTG 
AAGAATATGT GCATTTTGGG ATCTTTAATT ACAATGTATG CAAAATGTGG GAGCCTGGTT 
GATGCTTATC AAGTCTTTGA AGGGATTGAG GATCACAATG TGATCAGTTG GACAGCCATG 
ATCTCAGCTT ACCAGCTGCA TGGCTGTGCA AACCAAGTGA TTGAATTGTT TGAGCATATG 
CTAAGTGAGG GGATTGAACC GAGTCATGTT ACTTTTGTCT GTGTTCTATC AGCTTGTAGC 
CATACTGGGC GTGTTGAAGA GGGACTTGCT CACTTCAATT CCATGAAGAA AATTCATGAT 
ATGAACCCTG GGCCCGAACA CTACGCCTGC ATGGTTGACT TGCTTGGTCG TGCTGGTTGG 
TTGGATGAAG CTAAGAGGTT TATAGAATCA ATGCCAATGA AGCCCACCCC ATCTGTCTGG 
GGAGCTCTGC TTGGGGCTTG CAGGAAATAC GGCAATCTGA AAATGGGAAG AGAAGCTGCA 
GAGAGACTTT TTGAGATGGA GCCATATAAT CCGGGAAACT ACGTGCTGCT TGCTAACATG 
TGCACACGCA GTGGAAGGCT GGAAGAAGCT AATGAGGTGA GGAGATTGAT GGGTGTCAAT 
GGGGTAAGAA AGGAACCTGG CTGTAGCTGG ATTGATGTTA AGAACATGAC ATTTGTGTTC 
ACTGCACATG ATAGATCACA TTCAAGTTCG GATGAGATCT ATAAGATGCT AGAGAAGTTG 
GAGAAATTGG TGAAGAAGAA AGGGTATGTG GCTGAAACTG AATTTGTCAC TAACCATCTG 
GAAGAGAACG AGGAGGAGCA GGGCTTGTGG TATCACAGTG AGAAACTAGC CCTTGCATTT 
GGACTACTAA CCCTTCCTAT CGATTCTCCA ATTAGAATAA AGAAGAACCT GAGGACTTGT 
GGTCATTGTC ATACAGTTAT GAAACTTGCT TCAAAGATTT TTGACAGAGA GATTATTGTC 
AGGGATATCA ATCGGTTCCA CCGGTTTGCA GATGGTTTTT GTTCCTGTGG AGATTACTGG 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_019080757.1
CDS	995..2197
Translation	MGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW

Target ORF information:

RefSeq Version	XM_019225212.1
Organism	Vitis vinifera(wine grape)
Definition	Vitis vinifera pentatricopeptide repeat-containing protein At2g22070-like (LOC100242647), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_019225212.1

ORF Insert Sequence:

ATGGGGTTTG TCCAAAATGA CAAATTTGAA GAAGCGTGCA ATTATTTTTG GGTCATGAGG 
AGGGAAGGGA TTTTACCTGA TGAGGCCTCA TTCTCTACTG TTCTTCATTC TTCCGCTAGT 
CTGGCTGCAT TACATCAAGG CACTGCAATC CATGATCAGA TAATAAAATT AGGGTATGTG 
AAGAATATGT GCATTTTGGG ATCTTTAATT ACAATGTATG CAAAATGTGG GAGCCTGGTT 
GATGCTTATC AAGTCTTTGA AGGGATTGAG GATCACAATG TGATCAGTTG GACAGCCATG 
ATCTCAGCTT ACCAGCTGCA TGGCTGTGCA AACCAAGTGA TTGAATTGTT TGAGCATATG 
CTAAGTGAGG GGATTGAACC GAGTCATGTT ACTTTTGTCT GTGTTCTATC AGCTTGTAGC 
CATACTGGGC GTGTTGAAGA GGGACTTGCT CACTTCAATT CCATGAAGAA AATTCATGAT 
ATGAACCCTG GGCCCGAACA CTACGCCTGC ATGGTTGACT TGCTTGGTCG TGCTGGTTGG 
TTGGATGAAG CTAAGAGGTT TATAGAATCA ATGCCAATGA AGCCCACCCC ATCTGTCTGG 
GGAGCTCTGC TTGGGGCTTG CAGGAAATAC GGCAATCTGA AAATGGGAAG AGAAGCTGCA 
GAGAGACTTT TTGAGATGGA GCCATATAAT CCGGGAAACT ACGTGCTGCT TGCTAACATG 
TGCACACGCA GTGGAAGGCT GGAAGAAGCT AATGAGGTGA GGAGATTGAT GGGTGTCAAT 
GGGGTAAGAA AGGAACCTGG CTGTAGCTGG ATTGATGTTA AGAACATGAC ATTTGTGTTC 
ACTGCACATG ATAGATCACA TTCAAGTTCG GATGAGATCT ATAAGATGCT AGAGAAGTTG 
GAGAAATTGG TGAAGAAGAA AGGGTATGTG GCTGAAACTG AATTTGTCAC TAACCATCTG 
GAAGAGAACG AGGAGGAGCA GGGCTTGTGG TATCACAGTG AGAAACTAGC CCTTGCATTT 
GGACTACTAA CCCTTCCTAT CGATTCTCCA ATTAGAATAA AGAAGAACCT GAGGACTTGT 
GGTCATTGTC ATACAGTTAT GAAACTTGCT TCAAAGATTT TTGACAGAGA GATTATTGTC 
AGGGATATCA ATCGGTTCCA CCGGTTTGCA GATGGTTTTT GTTCCTGTGG AGATTACTGG 
TGA