| Gene Symbol | PHACTR3 |
| Entrez Gene ID | 100126239 |
| Full Name | phosphatase and actin regulator 3 |
| Gene Type | protein-coding |
| Organism | Sus scrofa(pig) |
| Genome |
ORF » Species Summary » Sus scrofa » PHACTR3 cDNA ORF clone
| Gene Symbol | PHACTR3 |
| Entrez Gene ID | 100126239 |
| Full Name | phosphatase and actin regulator 3 |
| Gene Type | protein-coding |
| Organism | Sus scrofa(pig) |
| Genome |
| mRNA | Protein | Name |
|---|---|---|
| XM_005673064.3 | XP_005673121.1 | phosphatase and actin regulator 3 isoform X1 |
| XM_013985521.1 | XP_013840975.1 | phosphatase and actin regulator 3 isoform X3 |
| XM_005673064.2 | XP_005673121.1 | phosphatase and actin regulator 3 isoform X2 |
| XM_013985520.1 | XP_013840974.1 | phosphatase and actin regulator 3 isoform X1 |
| NM_001110176.1 | NP_001103646.1 | phosphatase and actin regulator 3 |
Investigation of QTL regions on Chromosome 17 for genes associated with meat color in the pig.
Fan B, Glenn KL, Geiger B, Mileham A, Rothschild MF
Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie125(4)240-7(2008 Aug)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Polymorphisms within the PHACTR3 gene are associated with meat color in the pig.
Title: Investigation of QTL regions on Chromosome 17 for genes associated with meat color in the pig.
The following PHACTR3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PHACTR3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OSe00907 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001110176.1 | |
| Accession Version | NM_001110176.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1377bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-03-01 | |
| Organism | Sus scrofa(pig) | |
| Product | phosphatase and actin regulator 3 | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CR956363.11. | |
1 | ATGCATCCAG CAATTTGGAT GCTGTATGAG ACGGAACAAA CCCCCCCGGC GCGCTCCGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001103646.1 |
| CDS | 206..1582 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001110176.1 |
1 | ATGCATCCAG CAATTTGGAT GCTGTATGAG ACGGAACAAA CCCCCCCGGC GCGCTCCGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe25166 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005673064.3 , XM_005673064.2 | |
| Accession Version | XM_005673064.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1683bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-05-12 | |
| Organism | Sus scrofa(pig) | |
| Product | phosphatase and actin regulator 3 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010459.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_005673064.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCCGCGT CCGAGGACGG GAGCGGCTGC CTCGTGTCGC GGGGCCGCTC GCAGAGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005673121.1 |
| CDS | 563..2245 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005673064.3 |
1 | ATGGCCGCGT CCGAGGACGG GAGCGGCTGC CTCGTGTCGC GGGGCCGCTC GCAGAGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe25166 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005673064.3 , XM_005673064.2 | |
| Accession Version | XM_005673064.2 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1683bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2015-09-10 | |
| Organism | Sus scrofa(Pig) | |
| Product | phosphatase and actin regulator 3 isoform X2 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003612612.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_005673064.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCCGCGT CCGAGGACGG GAGCGGCTGC CTCGTGTCGC GGGGCCGCTC GCAGAGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005673121.1 |
| CDS | 424..2106 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005673064.2 |
1 | ATGGCCGCGT CCGAGGACGG GAGCGGCTGC CTCGTGTCGC GGGGCCGCTC GCAGAGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe45010 | |
| Clone ID Related Accession (Same CDS sequence) | XM_013985520.1 | |
| Accession Version | XM_013985520.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1905bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2015-09-10 | |
| Organism | Sus scrofa(Pig) | |
| Product | phosphatase and actin regulator 3 isoform X1 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003612612.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCCGCGT CCGAGGACGG GAGCGGCTGC CTCGTGTCGC GGGGCCGCTC GCAGAGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_013840974.1 |
| CDS | 426..2330 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_013985520.1 |
1 | ATGGCCGCGT CCGAGGACGG GAGCGGCTGC CTCGTGTCGC GGGGCCGCTC GCAGAGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe45011 | |
| Clone ID Related Accession (Same CDS sequence) | XM_013985521.1 | |
| Accession Version | XM_013985521.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1674bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2015-09-10 | |
| Organism | Sus scrofa(Pig) | |
| Product | phosphatase and actin regulator 3 isoform X3 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003612612.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCGCGGCC GGGGCGGGGG GCGCGGCCGC TGGCCGGCGC CGGTGCGCTC GCTGCTGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_013840975.1 |
| CDS | 28..1701 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_013985521.1 |
1 | ATGCGCGGCC GGGGCGGGGG GCGCGGCCGC TGGCCGGCGC CGGTGCGCTC GCTGCTGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Investigation of QTL regions on Chromosome 17 for genes associated with meat color in the pig. |