ORF » Species Summary » Sorghum bicolor » LOC8077549 cDNA ORF clone

LOC8077549 cDNA ORF clone, Sorghum bicolor(sorghum)

The following LOC8077549 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC8077549 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OSc15948 XM_002454827.1
Latest version!		 Sorghum bicolor hypothetical protein, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
OSc115801 XM_002454827.2
Latest version!		 Sorghum bicolor beta-amylase 1, chloroplastic (LOC8077549), mRNA. pcDNA3.1-C-(k)DYK or customized vector TBD $342.30
$489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC8077549 ( XM_002454827.1 ) cDNA ORF clone, Sorghum bicolor(sorghum) -> XP_002454872.1 Sorghum bicolor hypothetical protein, mRNA.
    Price & Availability↑
    CloneID OSc15948
    Clone ID Related Accession (Same CDS sequence) XM_002454827.1
    Accession Version XM_002454827.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1329bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2009-07-12
    Organism Sorghum bicolor(Sorghum)
    Product hypothetical protein
    Comment PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012872). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGGGGCCT CGCTCGCCAC CCTGACCGCA ACCGTCGTGG CCGGCCTCGC CGTAGACCTC 
    TGGTGGGGCG TCGTCGAACG CCACCGCCCC GGGGAGTACG ACTGGGCCGG CTACCTCGAG 
    CTCGCCGCCA TGGCCCGACG CCACGGCCTC CGCGTGCGCG CCATCCTCGC CTTCCACCAG 
    TGCGGCGCCG GCCCGCATGA CCCGCCCTGG ATTCCTTTGC CACAATGGGT GCTTGAGGAG 
    ATGGATAAGA TTCCAGACTT GTCATATACC AATAGATACC AGAAGAGAAA CAAAGAATAC 
    ATATCACTGG GATGTGATAT TCTTCCTGTT CTGAAAGGAA GATCACCTAT GCAAGCTTAC 
    TCTGACTTCA TGAGAAGCTT CCGCAATACT TTCGAAGATT ACCTTGGGGC CATAGTAACA 
    GAAGTTCAAG TTGGAATGGG TCCAGGAGGT GAGCTTAGGT ATCCATCATG CCCAACTGAG 
    AAGCTTAATC AGCCAGGCAG TTCATTTGAA CTTGGGGAAT TTCAATGTTA TGACAAGTTT 
    ATGCAAGCTT CATTGAGTGC TCGTGCAAAA ATTTTTGGTT TACAAGAATG GGGTAATGGT 
    GGTTCAACTG GCACAGATGG TTCACAGCAG AACCTTGAAG AAACGAGTTT TTTTCGTGCT 
    GATGGAGGCT ATTGGGATAC ACCATATGGT CACTTTTTCC TTGAATGGTA TTCAGGAATG 
    CTTCTCCTCC ATGGAGAGAG GTTATGCATG ACAGCTGATG CAATCTTCTC TGGTACCGGT 
    GTGACCATAT CAGGGAAGGT TGCTGGCATA CATTGGCACT ATTATACTTG TTCACATCCA 
    TCTGAACTGA CAGCTGGCTA CTATAATACA CTATTAAGAG ATGGCTATCT TCCTATAGCT 
    CAAATGTTTG CCAAATACAA AGCTGCATTG TGCTGCGGTT GTTTCGACCT GAGGGACGTA 
    GAAAGAACAA ATTCTGAGAG CAGTCCAGAA GGTACTCTCC GGCACCTTGC AGGTGCTGCT 
    AAAATGTGCA ATATTCCACT TAATGGTGAG AATTCTGTGA CAAGGCTGGA TGATGCATCA 
    CTGAATCAAG TCATAAGAAG CTCAAGGCTC TACTCAGGTC GTACTTCAGG AACATCTTTT 
    TCCTTTAACT ATGTTAGGAT GAACAAAAGC TTGTTTGAGT TTCACAATTG GAATCGATTT 
    ACAAAGTTTG TTAGGCAGAT GTCAGATGCC AGGGCCTTTC TAGCAAGACT ATATGTCAGG 
    AGAGGGCAGC AATACTTGTC TTCAATGTCG GTTGTTTGGG TGGTTAGTCG GGCTTGTGCA 
    TATACATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002454872.1
    CDS1..1329
    Translation

    Target ORF information:

    RefSeq Version XM_002454827.1
    Organism Sorghum bicolor(Sorghum)
    Definition Sorghum bicolor hypothetical protein, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002454827.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGGGGCCT CGCTCGCCAC CCTGACCGCA ACCGTCGTGG CCGGCCTCGC CGTAGACCTC 
    TGGTGGGGCG TCGTCGAACG CCACCGCCCC GGGGAGTACG ACTGGGCCGG CTACCTCGAG 
    CTCGCCGCCA TGGCCCGACG CCACGGCCTC CGCGTGCGCG CCATCCTCGC CTTCCACCAG 
    TGCGGCGCCG GCCCGCATGA CCCGCCCTGG ATTCCTTTGC CACAATGGGT GCTTGAGGAG 
    ATGGATAAGA TTCCAGACTT GTCATATACC AATAGATACC AGAAGAGAAA CAAAGAATAC 
    ATATCACTGG GATGTGATAT TCTTCCTGTT CTGAAAGGAA GATCACCTAT GCAAGCTTAC 
    TCTGACTTCA TGAGAAGCTT CCGCAATACT TTCGAAGATT ACCTTGGGGC CATAGTAACA 
    GAAGTTCAAG TTGGAATGGG TCCAGGAGGT GAGCTTAGGT ATCCATCATG CCCAACTGAG 
    AAGCTTAATC AGCCAGGCAG TTCATTTGAA CTTGGGGAAT TTCAATGTTA TGACAAGTTT 
    ATGCAAGCTT CATTGAGTGC TCGTGCAAAA ATTTTTGGTT TACAAGAATG GGGTAATGGT 
    GGTTCAACTG GCACAGATGG TTCACAGCAG AACCTTGAAG AAACGAGTTT TTTTCGTGCT 
    GATGGAGGCT ATTGGGATAC ACCATATGGT CACTTTTTCC TTGAATGGTA TTCAGGAATG 
    CTTCTCCTCC ATGGAGAGAG GTTATGCATG ACAGCTGATG CAATCTTCTC TGGTACCGGT 
    GTGACCATAT CAGGGAAGGT TGCTGGCATA CATTGGCACT ATTATACTTG TTCACATCCA 
    TCTGAACTGA CAGCTGGCTA CTATAATACA CTATTAAGAG ATGGCTATCT TCCTATAGCT 
    CAAATGTTTG CCAAATACAA AGCTGCATTG TGCTGCGGTT GTTTCGACCT GAGGGACGTA 
    GAAAGAACAA ATTCTGAGAG CAGTCCAGAA GGTACTCTCC GGCACCTTGC AGGTGCTGCT 
    AAAATGTGCA ATATTCCACT TAATGGTGAG AATTCTGTGA CAAGGCTGGA TGATGCATCA 
    CTGAATCAAG TCATAAGAAG CTCAAGGCTC TACTCAGGTC GTACTTCAGG AACATCTTTT 
    TCCTTTAACT ATGTTAGGAT GAACAAAAGC TTGTTTGAGT TTCACAATTG GAATCGATTT 
    ACAAAGTTTG TTAGGCAGAT GTCAGATGCC AGGGCCTTTC TAGCAAGACT ATATGTCAGG 
    AGAGGGCAGC AATACTTGTC TTCAATGTCG GTTGTTTGGG TGGTTAGTCG GGCTTGTGCA 
    TATACATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC8077549 ( XM_002454827.2 ) cDNA ORF clone, Sorghum bicolor(sorghum) -> XP_002454872.2 Sorghum bicolor beta-amylase 1, chloroplastic (LOC8077549), mRNA.
    Price & Availability↑
    CloneID OSc115801
    Clone ID Related Accession (Same CDS sequence) XM_002454827.2
    Accession Version XM_002454827.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1644bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-12
    Organism Sorghum bicolor(sorghum)
    Product beta-amylase 1, chloroplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012872.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 13, 2017 this sequence version replaced XM_002454827.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sorghum bicolor Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGCGGCGA TTACCGCGCC GCCGGCGCCT CCTCCGGCCT CCACCTCATG CCGTCTCCTC 
    CGCCGCCGCG CGCCACTCAT CCGCTTCGCC GCCTCCTCAT CCTCCTCCTC CTCGTCCCCA 
    TCCTCCCGCT TCCGCTCCTC CTCCTCCTCC TTCCCCGGCG CAGCCGGCAG CAGCAGCAAC 
    AGCAGCGGCG GCGGCGGCGA GATCCTCCAC GTCTCGCCGC CTCCCCCGCC CGCCGCGCCC 
    CCCGGGGCCC CCGTCTACGT CACGCTCCCC GCCGACGCCG TCGGCCCGGG GGGCCGCGTC 
    GCGCGCCGCC GAGCCATGGG GGCCTCGCTC GCCGCCCTGG CCGCCGCCGG CGTTGCGGGC 
    GTCGCCGTCG AGCTCTGGTG GGGCGTCGTC GAACGCCACC GCCCCGGGGA GTACGACTGG 
    GCCGGCTACC TCGAGCTCGC CGCCATGGCC CGACGCCACG GCCTCCGCGT GCGCGCCATC 
    CTCGCCTTCC ACCAGTGCGG CGCCGGCCCG CATGACCCGC CCTGGATTCC TTTGCCACAA 
    TGGGTGCTTG AGGAGATGGA TAAGATTCCA GACTTGTCAT ATACCAATAG ATACCAGAAG 
    AGAAACAAAG AATACATATC ACTGGGATGT GATATTCTTC CTGTTCTGAA AGGAAGATCA 
    CCTATGCAAG CTTACTCTGA CTTCATGAGA AGCTTCCGCA ATACTTTCGA AGATTACCTT 
    GGGGCCATAG TAACAGAAGT TCAAGTTGGA ATGGGTCCAG GAGGTGAGCT TAGGTATCCA 
    TCATGCCCAA CTGAGAAGCT TAATCAGCCA GGCAGTTCAT TTGAACTTGG GGAATTTCAA 
    TGTTATGACA AGTTTATGCA AGCTTCATTG AGTGCTCGTG CAAAAATTTT TGGTTTACAA 
    GAATGGGGTA ATGGTGGTTC AACTGGCACA GATGGTTCAC AGCAGAACCT TGAAGAAACG 
    AGTTTTTTTC GTGCTGATGG AGGCTATTGG GATACACCAT ATGGTCACTT TTTCCTTGAA 
    TGGTATTCAG GAATGCTTCT CCTCCATGGA GAGAGGTTAT GCATGACAGC TGATGCAATC 
    TTCTCTGGTA CCGGTGTGAC CATATCAGGG AAGGTTGCTG GCATACATTG GCACTATTAT 
    ACTTGTTCAC ATCCATCTGA ACTGACAGCT GGCTACTATA ATACACTATT AAGAGATGGC 
    TATCTTCCTA TAGCTCAAAT GTTTGCCAAA TACAAAGCTG CATTGTGCTG CGGTTGTTTC 
    GACCTGAGGG ACGTAGAAAG AACAAATTCT GAGAGCAGTC CAGAAGGTAC TCTCCGGCAC 
    CTTGCAGGTG CTGCTAAAAT GTGCAATATT CCACTTAATG GTGAGAATTC TGTGACAAGG 
    CTGGATGATG CATCACTGAA TCAAGTCATA AGAAGCTCAA GGCTCTACTC AGGTCGTACT 
    TCAGGAACAT CTTTTTCCTT TAACTATGTT AGGATGAACA AAAGCTTGTT TGAGTTTCAC 
    AATTGGAATC GATTTACAAA GTTTGTTAGG CAGATGTCAG ATGCCAGGGC CTTTCTAGCA 
    AGACTATATG TCAGGAGAGG GCAGCAATAC TTGTCTTCAA TGTCGGTTGT TTGGGTGGTT 
    AGTCGGGCTT GTGCATATAC ATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002454872.2
    CDS144..1787
    Translation

    Target ORF information:

    RefSeq Version XM_002454827.2
    Organism Sorghum bicolor(sorghum)
    Definition Sorghum bicolor beta-amylase 1, chloroplastic (LOC8077549), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002454827.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGCGGCGA TTACCGCGCC GCCGGCGCCT CCTCCGGCCT CCACCTCATG CCGTCTCCTC 
    CGCCGCCGCG CGCCACTCAT CCGCTTCGCC GCCTCCTCAT CCTCCTCCTC CTCGTCCCCA 
    TCCTCCCGCT TCCGCTCCTC CTCCTCCTCC TTCCCCGGCG CAGCCGGCAG CAGCAGCAAC 
    AGCAGCGGCG GCGGCGGCGA GATCCTCCAC GTCTCGCCGC CTCCCCCGCC CGCCGCGCCC 
    CCCGGGGCCC CCGTCTACGT CACGCTCCCC GCCGACGCCG TCGGCCCGGG GGGCCGCGTC 
    GCGCGCCGCC GAGCCATGGG GGCCTCGCTC GCCGCCCTGG CCGCCGCCGG CGTTGCGGGC 
    GTCGCCGTCG AGCTCTGGTG GGGCGTCGTC GAACGCCACC GCCCCGGGGA GTACGACTGG 
    GCCGGCTACC TCGAGCTCGC CGCCATGGCC CGACGCCACG GCCTCCGCGT GCGCGCCATC 
    CTCGCCTTCC ACCAGTGCGG CGCCGGCCCG CATGACCCGC CCTGGATTCC TTTGCCACAA 
    TGGGTGCTTG AGGAGATGGA TAAGATTCCA GACTTGTCAT ATACCAATAG ATACCAGAAG 
    AGAAACAAAG AATACATATC ACTGGGATGT GATATTCTTC CTGTTCTGAA AGGAAGATCA 
    CCTATGCAAG CTTACTCTGA CTTCATGAGA AGCTTCCGCA ATACTTTCGA AGATTACCTT 
    GGGGCCATAG TAACAGAAGT TCAAGTTGGA ATGGGTCCAG GAGGTGAGCT TAGGTATCCA 
    TCATGCCCAA CTGAGAAGCT TAATCAGCCA GGCAGTTCAT TTGAACTTGG GGAATTTCAA 
    TGTTATGACA AGTTTATGCA AGCTTCATTG AGTGCTCGTG CAAAAATTTT TGGTTTACAA 
    GAATGGGGTA ATGGTGGTTC AACTGGCACA GATGGTTCAC AGCAGAACCT TGAAGAAACG 
    AGTTTTTTTC GTGCTGATGG AGGCTATTGG GATACACCAT ATGGTCACTT TTTCCTTGAA 
    TGGTATTCAG GAATGCTTCT CCTCCATGGA GAGAGGTTAT GCATGACAGC TGATGCAATC 
    TTCTCTGGTA CCGGTGTGAC CATATCAGGG AAGGTTGCTG GCATACATTG GCACTATTAT 
    ACTTGTTCAC ATCCATCTGA ACTGACAGCT GGCTACTATA ATACACTATT AAGAGATGGC 
    TATCTTCCTA TAGCTCAAAT GTTTGCCAAA TACAAAGCTG CATTGTGCTG CGGTTGTTTC 
    GACCTGAGGG ACGTAGAAAG AACAAATTCT GAGAGCAGTC CAGAAGGTAC TCTCCGGCAC 
    CTTGCAGGTG CTGCTAAAAT GTGCAATATT CCACTTAATG GTGAGAATTC TGTGACAAGG 
    CTGGATGATG CATCACTGAA TCAAGTCATA AGAAGCTCAA GGCTCTACTC AGGTCGTACT 
    TCAGGAACAT CTTTTTCCTT TAACTATGTT AGGATGAACA AAAGCTTGTT TGAGTTTCAC 
    AATTGGAATC GATTTACAAA GTTTGTTAGG CAGATGTCAG ATGCCAGGGC CTTTCTAGCA 
    AGACTATATG TCAGGAGAGG GCAGCAATAC TTGTCTTCAA TGTCGGTTGT TTGGGTGGTT 
    AGTCGGGCTT GTGCATATAC ATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Sorghum bicolor genome and the diversification of grasses.
    Nature457(7229)551-6(2009 Jan)
    Paterson AH,Bowers JE,Bruggmann R,Dubchak I,Grimwood J,Gundlach H,Haberer G,Hellsten U,Mitros T,Poliakov A,Schmutz J,Spannagl M,Tang H,Wang X,Wicker T,Bharti AK,Chapman J,Feltus FA,Gowik U,Grigoriev IV,Lyons E,Maher CA,Martis M,Narechania A,Otillar RP,Penning BW,Salamov AA,Wang Y,Zhang L,Carpita NC,Freeling M,Gingle AR,Hash CT,Keller B,Klein P,Kresovich S,McCann MC,Ming R,Peterson DG,Mehboob-ur-Rahman,Ware D,Westhoff P,Mayer KF,Messing J,Rokhsar DS


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