LOC105159493 cDNA ORF clone, Sesamum indicum(sesame)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC105159493
Entrez Gene ID	105159493
Full Name	oxysterol-binding protein-related protein 1C-like
Gene Type	protein-coding
Organism	Sesamum indicum(sesame)

mRNA and Protein(s)

mRNA	Protein	Name
XM_011076572.2	XP_011074874.1	oxysterol-binding protein-related protein 1C-like

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Development and validation of genic-SSR markers in sesame by RNA-seq.
Zhang H, Wei L, Miao H, Zhang T, Wang C
BMC genomics13316(2012 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC105159493 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC105159493 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OSe116765	XM_011076572.2 Latest version!	Sesamum indicum oxysterol-binding protein-related protein 1C-like (LOC105159493), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$426.30 $609.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC105159493 ( XM_011076572.2 ) cDNA ORF clone, Sesamum indicum(sesame) -> XP_011074874.1 Sesamum indicum oxysterol-binding protein-related protein 1C-like (LOC105159493), mRNA.

Price & Availability↑

CloneID	OSe116765
Clone ID Related Accession (Same CDS sequence)	XM_011076572.2
Accession Version	XM_011076572.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2385bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-04-05
Organism	Sesamum indicum(sesame)
Product	oxysterol-binding protein-related protein 1C-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_026147.1) and transcript sequence (JP635988.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 6, 2017 this sequence version replaced XM_011076572.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sesamum indicum Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 32 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGCGTCCCT TCTGTTTCGT TTCATCGATG ACTATGAACA GCAACTCCCA CATGCCGCCG 
GCCGATCCAC TAAACAAAAC TCAGAGTTCA GCGATGTCTA GGCCCCCTTC AACGCGTTAT 
TCCCTGCCGG ATCATATCTT CGTTGGAGCT CCGGTTAACA ATAACATTCA CCATCAAAAC 
AATCACAGCC GTGAGTTGAA GATTGATATA GTTGGGAATG GTATTTCTGG AATTTTGTAT 
AAATGGGTGA ATTATGGAAA AGGGTGGAGG CCTAGATGGT TTGTTTTGCA AGATGGGGTG 
TTAAGTTATT ATAAGATCCA TGGGTCGGAT AAAATTGTGG TTAATCAGGA GACTGAAAAA 
GGATCGAGGG TAATTGGGGA AGAGTCGATG AGGCTGATTG CGCGGCAGCA TAACAATCAT 
CATCATCACA ATCATCATAG AAATGGTAAC GGTGGTTCGT CCTCGAAAAG CCGGAAGCCC 
GTTGGCGAAG TTCATCTAAA GGTGTCATCT ATCCGAGAGA GCAAATCAGA TGACAGGAGA 
TTCTCAATTT TTACTGGTAC AAAGAGGCTC CATCTGAGGG CTGACAGCAG AGAGGATAGG 
GTGGCATGGA TGGAAGCTTT GCAAACTGTG AAAGACATGT TCCCGAGGAT GTCCAACAGT 
GAGTTAATGG CTCCTTTGGA CAATGTGGCT GTCTCGACAG AAAGGTTGAG GCAGAGATTA 
TTGGAAGAAG GTGTGAGTGA GGTGGCTATT CAGGATAGCG AGCAGATCAT GAGAAATGAA 
TTTGCATCAC TGCAAAATCA ATTGATGCTC TTGAAGCAGA AGTACTGGCT CCTCATGGAC 
ACACTGCGCC AGTTAGAGAC AGAAAAGGTG GATCTGGAGA ATACAGTAGT TGACGAAAGC 
CAGAGACAGT TAAAGGATGT TGGATCATCA TCTAGATCAA GGCAAGATAA GTATAGTGAG 
AGTGCGAGTG AATCTGAAGA TGAAAATGAA AGAGTTGATG CAGTAGAGGA AGATACAGAT 
GAAGAGGACA ATACTTTCTT TGACACCAGG GACTTTCTAT CATCTAGCTC TTTTAAAAGC 
AATGGATCGG ACTTTAGAAC ATCTTCTTTT TCATCCGATG ATGATGAACT TTATGCTTTT 
GATGTCGAGG ACAGTGTAGA TCCTGCCATT AGATCTGCAG GAACAAGCTT TCCTTACGTT 
AAACGTAGAA AGAAATTGCC AGACCCAGTT GAGAAAGAGA AAGCAGTGAG TTTGTGGTCA 
ATGATCAAAG ACAACATTGG GAAGGATCTC ACAAAAGTAT GTCTTCCGGT GTACTTCAAT 
GAGCCTCTCT CCTCTCTACA GAAATGTTTT GAAGATTTGG AGTATTCTTA TCTTATTGAT 
CGGGCTTATG AGTGGGGAAA GCAAGGTAAC AGCCTTATGA GGCTTCTGAA TGTAGCCGCA 
TTTGCTGTAT CTGGATATGC TTCTACGGAA GGAAGAAATT GCAAACCTTT TAATCCATTG 
TTAGGAGAGA CTTATGAGGC AGATTATCCG GATAAAGGCC TTCGATTTGT CTCAGAGAAG 
GTGAGTCATC ACCCCATGAT TGTGGCATGC CACTGCGAGG GAACAGGCTG GAGGTTCTAT 
GCTGATAGCA ATTTGAAGAG CAAATTTTGG GGCCGGAGCA TTCAGCTCGA TCCAGTTGGA 
ATTTTAACTC TTGAATTTGA TGATGGAGAA GTCTTCCAGT GGAGCAAGGT AACAACATCT 
ATATACAACC TTATTTTGGG GAAACTCTAT TGTGATCATT ATGGTACTAT GCGGATACAA 
GGAAACCGCA ATTACTCTTG TAAACTGAAA TTCAAGGAGC AGTCTATTAT AGATAGAAAC 
CCTCATCAGG TACAGGGAAT AGTTCAAGAC AAGAGTGGAA AGACCGTAGC AACTTTATTC 
GGAAAGTGGG ATGAGAGCAT GCATTATGTC AATGGGGACT GCTCCTCAAA AGGAAAAGGT 
CATGAATCTC TATCAGAAGC TCACTTGCTC TGGAAACGAA GCAAGCCACC CAAGTTCCCT 
ACACGTTATA ATTTTACACG CTTCGCTATC ACACTGAATG AGCTTATTCC TGGGCTGAAG 
GAAAAGCTTC CACCAACAGA TTCAAGGCTT AGACCTGATC AAAGGTGCTT GGAAAATGGG 
GAGTACGAGA TGGCAAATGC TGAAAAATTA CGACTGGAAC AGCGGCAACG ACAGGCTAGG 
AAGATGCAAG AGAGTGGTTG GAAACCACGA TGGTTTGCAA AAGACAAAGG ATCTGATACC 
TATCGCTACG TAGGTGGGTA TTGGGAAGCT AGGAAAGAAG GCAAATGGGA CGCATGTCCT 
GATATTTTTG GTCAAATACC TTGTGATCAA ATTTCAGAGG AGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_011074874.1
CDS	235..2619
Translation	MRPFCFVSSMTMNSNSHMPPADPLNKTQSSAMSRPPSTRYSLPDHIFVGAPVNNNIHHQNNHSRELKIDIVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGSDKIVVNQETEKGSRVIGEESMRLIARQHNNHHHHNHHRNGNGGSSSKSRKPVGEVHLKVSSIRESKSDDRRFSIFTGTKRLHLRADSREDRVAWMEALQTVKDMFPRMSNSELMAPLDNVAVSTERLRQRLLEEGVSEVAIQDSEQIMRNEFASLQNQLMLLKQKYWLLMDTLRQLETEKVDLENTVVDESQRQLKDVGSSSRSRQDKYSESASESEDENERVDAVEEDTDEEDNTFFDTRDFLSSSSFKSNGSDFRTSSFSSDDDELYAFDVEDSVDPAIRSAGTSFPYVKRRKKLPDPVEKEKAVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEDLEYSYLIDRAYEWGKQGNSLMRLLNVAAFAVSGYASTEGRNCKPFNPLLGETYEADYPDKGLRFVSEKVSHHPMIVACHCEGTGWRFYADSNLKSKFWGRSIQLDPVGILTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNRNYSCKLKFKEQSIIDRNPHQVQGIVQDKSGKTVATLFGKWDESMHYVNGDCSSKGKGHESLSEAHLLWKRSKPPKFPTRYNFTRFAITLNELIPGLKEKLPPTDSRLRPDQRCLENGEYEMANAEKLRLEQRQRQARKMQESGWKPRWFAKDKGSDTYRYVGGYWEARKEGKWDACPDIFGQIPCDQISEE

Target ORF information:

RefSeq Version	XM_011076572.2
Organism	Sesamum indicum(sesame)
Definition	Sesamum indicum oxysterol-binding protein-related protein 1C-like (LOC105159493), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_011076572.2

ORF Insert Sequence:

ATGCGTCCCT TCTGTTTCGT TTCATCGATG ACTATGAACA GCAACTCCCA CATGCCGCCG 
GCCGATCCAC TAAACAAAAC TCAGAGTTCA GCGATGTCTA GGCCCCCTTC AACGCGTTAT 
TCCCTGCCGG ATCATATCTT CGTTGGAGCT CCGGTTAACA ATAACATTCA CCATCAAAAC 
AATCACAGCC GTGAGTTGAA GATTGATATA GTTGGGAATG GTATTTCTGG AATTTTGTAT 
AAATGGGTGA ATTATGGAAA AGGGTGGAGG CCTAGATGGT TTGTTTTGCA AGATGGGGTG 
TTAAGTTATT ATAAGATCCA TGGGTCGGAT AAAATTGTGG TTAATCAGGA GACTGAAAAA 
GGATCGAGGG TAATTGGGGA AGAGTCGATG AGGCTGATTG CGCGGCAGCA TAACAATCAT 
CATCATCACA ATCATCATAG AAATGGTAAC GGTGGTTCGT CCTCGAAAAG CCGGAAGCCC 
GTTGGCGAAG TTCATCTAAA GGTGTCATCT ATCCGAGAGA GCAAATCAGA TGACAGGAGA 
TTCTCAATTT TTACTGGTAC AAAGAGGCTC CATCTGAGGG CTGACAGCAG AGAGGATAGG 
GTGGCATGGA TGGAAGCTTT GCAAACTGTG AAAGACATGT TCCCGAGGAT GTCCAACAGT 
GAGTTAATGG CTCCTTTGGA CAATGTGGCT GTCTCGACAG AAAGGTTGAG GCAGAGATTA 
TTGGAAGAAG GTGTGAGTGA GGTGGCTATT CAGGATAGCG AGCAGATCAT GAGAAATGAA 
TTTGCATCAC TGCAAAATCA ATTGATGCTC TTGAAGCAGA AGTACTGGCT CCTCATGGAC 
ACACTGCGCC AGTTAGAGAC AGAAAAGGTG GATCTGGAGA ATACAGTAGT TGACGAAAGC 
CAGAGACAGT TAAAGGATGT TGGATCATCA TCTAGATCAA GGCAAGATAA GTATAGTGAG 
AGTGCGAGTG AATCTGAAGA TGAAAATGAA AGAGTTGATG CAGTAGAGGA AGATACAGAT 
GAAGAGGACA ATACTTTCTT TGACACCAGG GACTTTCTAT CATCTAGCTC TTTTAAAAGC 
AATGGATCGG ACTTTAGAAC ATCTTCTTTT TCATCCGATG ATGATGAACT TTATGCTTTT 
GATGTCGAGG ACAGTGTAGA TCCTGCCATT AGATCTGCAG GAACAAGCTT TCCTTACGTT 
AAACGTAGAA AGAAATTGCC AGACCCAGTT GAGAAAGAGA AAGCAGTGAG TTTGTGGTCA 
ATGATCAAAG ACAACATTGG GAAGGATCTC ACAAAAGTAT GTCTTCCGGT GTACTTCAAT 
GAGCCTCTCT CCTCTCTACA GAAATGTTTT GAAGATTTGG AGTATTCTTA TCTTATTGAT 
CGGGCTTATG AGTGGGGAAA GCAAGGTAAC AGCCTTATGA GGCTTCTGAA TGTAGCCGCA 
TTTGCTGTAT CTGGATATGC TTCTACGGAA GGAAGAAATT GCAAACCTTT TAATCCATTG 
TTAGGAGAGA CTTATGAGGC AGATTATCCG GATAAAGGCC TTCGATTTGT CTCAGAGAAG 
GTGAGTCATC ACCCCATGAT TGTGGCATGC CACTGCGAGG GAACAGGCTG GAGGTTCTAT 
GCTGATAGCA ATTTGAAGAG CAAATTTTGG GGCCGGAGCA TTCAGCTCGA TCCAGTTGGA 
ATTTTAACTC TTGAATTTGA TGATGGAGAA GTCTTCCAGT GGAGCAAGGT AACAACATCT 
ATATACAACC TTATTTTGGG GAAACTCTAT TGTGATCATT ATGGTACTAT GCGGATACAA 
GGAAACCGCA ATTACTCTTG TAAACTGAAA TTCAAGGAGC AGTCTATTAT AGATAGAAAC 
CCTCATCAGG TACAGGGAAT AGTTCAAGAC AAGAGTGGAA AGACCGTAGC AACTTTATTC 
GGAAAGTGGG ATGAGAGCAT GCATTATGTC AATGGGGACT GCTCCTCAAA AGGAAAAGGT 
CATGAATCTC TATCAGAAGC TCACTTGCTC TGGAAACGAA GCAAGCCACC CAAGTTCCCT 
ACACGTTATA ATTTTACACG CTTCGCTATC ACACTGAATG AGCTTATTCC TGGGCTGAAG 
GAAAAGCTTC CACCAACAGA TTCAAGGCTT AGACCTGATC AAAGGTGCTT GGAAAATGGG 
GAGTACGAGA TGGCAAATGC TGAAAAATTA CGACTGGAAC AGCGGCAACG ACAGGCTAGG 
AAGATGCAAG AGAGTGGTTG GAAACCACGA TGGTTTGCAA AAGACAAAGG ATCTGATACC 
TATCGCTACG TAGGTGGGTA TTGGGAAGCT AGGAAAGAAG GCAAATGGGA CGCATGTCCT 
GATATTTTTG GTCAAATACC TTGTGATCAA ATTTCAGAGG AGTAG