LOC9634400 cDNA ORF clone, Selaginella moellendorffii

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC9634400
Entrez Gene ID	9634400
Full Name	hypothetical protein
Gene Type	protein-coding
Organism	Selaginella moellendorffii

mRNA and Protein(s)

mRNA	Protein	Name
XM_002991073.1	XP_002991119.1	hypothetical protein
XM_002991073.2	XP_002991119.1	phytochrome 1

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.
Banks JA, Nishiyama T, Hasebe M, Bowman JL, Gribskov M, dePamphilis C, Albert VA, Aono N, Aoyama T, Ambrose BA, Ashton NW, Axtell MJ, Barker E, Barker MS, Bennetzen JL, Bonawitz ND, Chapple C, Cheng C, Correa LG, Dacre M, DeBarry J, Dreyer I, Elias M, Engstrom EM, Estelle M, Feng L, Finet C, Floyd SK, Frommer WB, Fujita T, Gramzow L, Gutensohn M, Harholt J, Hattori M, Heyl A, Hirai T, Hiwatashi Y, Ishikawa M, Iwata M, Karol KG, Koehler B, Kolukisaoglu U, Kubo M, Kurata T, Lalonde S, Li K, Li Y, Litt A, Lyons E, Manning G, Maruyama T, Michael TP, Mikami K, Miyazaki S, Morinaga S, Murata T, Mueller-Roeber B, Nelson DR, Obara M, Oguri Y, Olmstead RG, Onodera N, Petersen BL, Pils B, Prigge M, Rensing SA, Ria?o-Pach?n DM, Roberts AW, Sato Y, Scheller HV, Schulz B, Schulz C, Shakirov EV, Shibagaki N, Shinohara N, Shippen DE, S?rensen I, Sotooka R, Sugimoto N, Sugita M, Sumikawa N, Tanurdzic M, Theissen G, Ulvskov P, Wakazuki S, Weng JK, Willats WW, Wipf D, Wolf PG, Yang L, Zimmer AD, Zhu Q, Mitros T, Hellsten U, Loqu? D, Otillar R, Salamov A, Schmutz J, Shapiro H, Lindquist E, Lucas S, Rokhsar D, Grigoriev IV
Science (New York, N.Y.)332(6032)960-3(2011 May)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC9634400 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC9634400 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OSb04438	XM_002991073.2 Latest version!	Selaginella moellendorffii phytochrome 1 (LOC9634400), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00
View Old Accession Versions >>
OSb04438	XM_002991073.1	Selaginella moellendorffii hypothetical protein (PHYB), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC9634400 ( XM_002991073.1 ) cDNA ORF clone, Selaginella moellendorffii -> XP_002991119.1 Selaginella moellendorffii hypothetical protein (PHYB), partial mRNA.

Price & Availability↑

CloneID	OSb04438
Clone ID Related Accession (Same CDS sequence)	XM_002991073.1 , XM_002991073.2
Accession Version	XM_002991073.1	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3432bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-03-22
Organism	Selaginella moellendorffii
Product	hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_003314375). ##Metadata-START## Organism Display Name :: Selaginella moellendorfii GOLD Stamp ID :: Gi00760 Genome size :: 212.5 Mb ##Metadata-END## COMPLETENESS: incomplete on the 5' end.

ATGTCGACCA CCAAGCTGAC TTACTCTTCG GGCAGCTCCG CCAAGTCCAA GCACAGCGTC 
CGTGTGGCAC AGACGACCGC GGATGCCAAG CTCCATGCCG TGTACGAGGA GTCTGGTGAG 
TCCGGGGACT CGTTCGACTA CACCAAGTCG GTGAATGCAA CCAAGTCCAC GGGCGAGAGC 
ATCCCGGCGC AGGCCGTCAC GGCCTACTTG CAGCGGATGC AGCGCGGTGG CCTGGTGCAG 
CCCTTCGGCT GTATGCTGGC GGTGGAGGAG GGCAGCTTCC GCGTGATTGC TTTCAGCGAC 
AATGCAGGGG AGATGCTGGA CCTCATGCCC CAGTCGGTCC CCAGCCTCGG CGCCGGGCAG 
CAGGATCTGC TGGGGATCGG CAGCGACGCG CGCAGCCTCT TCACGCCGGC CAGCGCCAGC 
GCCCTGGAGA AGGCGGCGGG CGCCATCGAC GTGAGCATGC TCAACCCCAT CTCCGTCCAC 
TGCAAGACGT CGGCCAAGCC CTTCTACGCC ATCGTCCATC GCATCGACGT GGGCCTGGTG 
CTGGACCTGG AGCCCGTCAA GGCCAGCGAC ACGAGCGTGG GATCCGCTGC CGGTGCGCTC 
CAGTCCCACA AGCTGGCGGC CAAGGCCATA TCGCGCCTCC AGTCGCTGCC CGGCGGCGAC 
ATCGGGCTGC TGTGCGACAC GGTGGTGGAG GAGGTGCGCG AGCTGACGGG CTACGACCGC 
GTCATGGCCT ACAAGTTCCA CGACGACGAG CACGGCGAGG TGGTGGCGGA GATCCGGCGC 
TCCGACCTGG AGCCTTACCT GGGCCTGCAC TACCCGGCAA CCGACATTCC CCAGGCCTCC 
CGCTTCCTCT TCATGAAGAA CCGGGTACGC ATGATCTGCG ACTGCTCCGC GGCGCCCGTC 
AAGATCAGCC AGGACAAGGA TCTGCGGCAG CCCATCAGCT TGGCCGGCTC CACGCTGCGG 
GCACCCCACG GTTGCCACGC GCAGTACATG GGCAACATGG GCTCCGTCGC CTCGCTGGTG 
ATGGCGGTGA TCATCAACGA CAACGACGAC GAGTACCGCT CGTCGTCGGG CGGGGGTGGC 
GGCGGCGGCG GCGCGTACCA GCAGAAGGGC AGGAAGCTGT GGGGGATGGT GGTGTGCCAC 
CACACGTCGC CTCGCTCGGT GCCTTTCCCA CTGCGCTCCG CCTGCGAGTT CCTCATGCAA 
GTGTTTGGGC TCCAGCTCAA TATGGAGGTG GAGCTGGCAG CGCAGCTGCG GGAGAAGCAC 
ATCCTGCGCA CCCAGACACT CCTGTGTGAC ATGCTGCTCC GCGACGCCCC CATCGGCATT 
GTGTCGCAGT CACCAAACAT CATGGACCTG GTCAAGTGCG ATGGTGCTGC CCTCTACTAC 
GGCAAGCGCT TCTGGCTCTT GGGCGTCACG CCCAGCGAGG CGCAAATCAA GGACATTGCC 
GACTGGCTGC TGGAGCACCA CAAGGACTCC ACCGGCCTCA GCACCGACAG CCTGGCCGAC 
GCCGGCTACC CGGGTGCCGC GTCACTGGGC GACGAGGTGT GCGGCATGGC CGCGGCCAAG 
ATCACCGCCA AGGACTTTTT GTTTTGGTTC CGCTCCCACA CCGCCAAGGA GATCAAGTGG 
GGTGGCGCCA AGCACGACCC CGACGACAAG GACGACGGGC GCAAGATGCA CCCCCGCTCC 
TCGTTCAAGG CCTTCCTCGA GGTGGTGAAG CGGAGGAGCC TGCCATGGGA GGACGTGGAG 
ATGGACGCCA TACACTCGCT GCAGCTCATC CTCCGCGGCT CCTTCCACGA CATTGACGAC 
AGCGACACCA AGACCATGAT CCACGCGCGC CTCAACGACC TCAAGCTCCA GGGCATGGAC 
GAGCTGAGCA CTGTCGCCAA CGAGATGGTA CGCCTCATCG AGACCGCCAC CGCGCCCATC 
CTTGCTGTCG ACTCGAGCGG CTTTATCAAC GGCTGGAACG CAAAGGTGGC GGAGCTCACC 
GGGCTGCCCG TGACCGAGGC CATGGGGAGG TCCCTCGCCA AGGACCTGGT GCTGCAAGAG 
TCTGCGGACA TGGTGGAGAG GCTGCTCTAT CTGGCGCTTC AAGGCGACGA GGAGCAGAAC 
GTGGAGCTCA AGCTCAAGAC GTTCGGCGTT CAAAAGGACA AGGAGGCGGT CATTCTGGTC 
GTCAACGCGT GCGCCAGCAG GGACGTTTCG GACAATGTGG TGGGAGTGTG CTTCGTTGGC 
CAGGACGTGA CGGGGCAGAA GGTGGTAATG GACAAGTTCA CGCGCATCCA AGGCGACTAC 
AAGGCCATCG TGCAGAACCC CAACCCGCTG ATACCGCCAA TCTTTGGCGC TGACGAGTTT 
GGCTACTGCT CCGAGTGGAA TCCTGCCATG GAAAAGCTGT CTGGGTGGAA GCGGGAAGAA 
GTCCTGGGAA AGATGCTTGT CGGAGAGATA TTTGGCATCC AGATGATGTA CTGCCGCCTC 
AAAGGCCAGG ACGCCGTCAC CAAATTTATG ATCGTTCTCA ACAGCGCAGC AGATGGCCAG 
GACACGGAGA AGTTCCCCTT CGCCTTCTTT GATCGACAGG GCAAGTACGT CGAGGCTCTC 
CTCACGGCCA CCAAGCGGGC GGATGCCGAG GGTTCCATCA CCGGAGTGTT TTGCTTCCTA 
CATATTGCCA GTGCCGAGTT GCAACAGGCC TTGACAGTCC AAAGAGCCAC CGAGAAGGTT 
GCCTTGTCCA AGCTCAAAGA ACTGGCTTAC ATCCGCCAGG AGATAAAGAA TCCGCTCTAT 
GGCATCATGT TCACTCGGAC TCTCATGGAA ACCACCGACC TGTCCGAGGA TCAGAAGCAG 
TACGTAGAGA CTGGTGCTGT GTGCGAGAAG CAAATAAGGA AGATCCTGGA CGATATGGAC 
CTGGAAAGCA TTGAGGATGG CTACCTGGAG CTGGATACGA CTGAGTTCAT GATGGGGACG 
GTTATGGACG CTGTCATCAG CCAGGGCATG ATCACCTCTA AAGAAAAGAA CCTGCAGCTG 
ATTCGGGAGA CTCCAAAGGA GATCAAGGCC ATGTTTCTGT ACGGCGACCA GGTGCGCCTC 
CAGCAGGTTC TGGCAGATTT CCTGCTCAAC GCGATCCGCT TCACTCCGTC ATCCGAGAAT 
TGGGTGGGGA TAAAGGTGGC CACGTCTAGA AAGCGCTTGG GTGGTGGTGT GCATGTGATG 
CATCTCGAGT TCAGGATAAC TCACCCAGGT GTTGGCCTCC CTGAAGAGCT TGTCCAGGAG 
ATGTTTGACA GGGGCCGAGG TATGACACAG GAGGGCCTGG GCCTCAGCAT GTGCCGCAAA 
CTCGTCAAAC TCATGAACGG GGAAGTGGAG TACCTCAGGG AACCCGGCAA AAACTTCTTC 
CTGGTCAGCC TGGAGCTCCC CTTGGCACAA CGGGATGATG CCGGCAGCGT TAAGTTTCAA 
GCTTCCAGCT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002991119.1
CDS	1..3432
Translation	MSTTKLTYSSGSSAKSKHSVRVAQTTADAKLHAVYEESGESGDSFDYTKSVNATKSTGESIPAQAVTAYLQRMQRGGLVQPFGCMLAVEEGSFRVIAFSDNAGEMLDLMPQSVPSLGAGQQDLLGIGSDARSLFTPASASALEKAAGAIDVSMLNPISVHCKTSAKPFYAIVHRIDVGLVLDLEPVKASDTSVGSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRELTGYDRVMAYKFHDDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCSAAPVKISQDKDLRQPISLAGSTLRAPHGCHAQYMGNMGSVASLVMAVIINDNDDEYRSSSGGGGGGGGAYQQKGRKLWGMVVCHHTSPRSVPFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGVTPSEAQIKDIADWLLEHHKDSTGLSTDSLADAGYPGAASLGDEVCGMAAAKITAKDFLFWFRSHTAKEIKWGGAKHDPDDKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFHDIDDSDTKTMIHARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAELTGLPVTEAMGRSLAKDLVLQESADMVERLLYLALQGDEEQNVELKLKTFGVQKDKEAVILVVNACASRDVSDNVVGVCFVGQDVTGQKVVMDKFTRIQGDYKAIVQNPNPLIPPIFGADEFGYCSEWNPAMEKLSGWKREEVLGKMLVGEIFGIQMMYCRLKGQDAVTKFMIVLNSAADGQDTEKFPFAFFDRQGKYVEALLTATKRADAEGSITGVFCFLHIASAELQQALTVQRATEKVALSKLKELAYIRQEIKNPLYGIMFTRTLMETTDLSEDQKQYVETGAVCEKQIRKILDDMDLESIEDGYLELDTTEFMMGTVMDAVISQGMITSKEKNLQLIRETPKEIKAMFLYGDQVRLQQVLADFLLNAIRFTPSSENWVGIKVATSRKRLGGGVHVMHLEFRITHPGVGLPEELVQEMFDRGRGMTQEGLGLSMCRKLVKLMNGEVEYLREPGKNFFLVSLELPLAQRDDAGSVKFQASS

Target ORF information:

RefSeq Version	XM_002991073.1
Organism	Selaginella moellendorffii
Definition	Selaginella moellendorffii hypothetical protein (PHYB), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002991073.1

ORF Insert Sequence:

ATGTCGACCA CCAAGCTGAC TTACTCTTCG GGCAGCTCCG CCAAGTCCAA GCACAGCGTC 
CGTGTGGCAC AGACGACCGC GGATGCCAAG CTCCATGCCG TGTACGAGGA GTCTGGTGAG 
TCCGGGGACT CGTTCGACTA CACCAAGTCG GTGAATGCAA CCAAGTCCAC GGGCGAGAGC 
ATCCCGGCGC AGGCCGTCAC GGCCTACTTG CAGCGGATGC AGCGCGGTGG CCTGGTGCAG 
CCCTTCGGCT GTATGCTGGC GGTGGAGGAG GGCAGCTTCC GCGTGATTGC TTTCAGCGAC 
AATGCAGGGG AGATGCTGGA CCTCATGCCC CAGTCGGTCC CCAGCCTCGG CGCCGGGCAG 
CAGGATCTGC TGGGGATCGG CAGCGACGCG CGCAGCCTCT TCACGCCGGC CAGCGCCAGC 
GCCCTGGAGA AGGCGGCGGG CGCCATCGAC GTGAGCATGC TCAACCCCAT CTCCGTCCAC 
TGCAAGACGT CGGCCAAGCC CTTCTACGCC ATCGTCCATC GCATCGACGT GGGCCTGGTG 
CTGGACCTGG AGCCCGTCAA GGCCAGCGAC ACGAGCGTGG GATCCGCTGC CGGTGCGCTC 
CAGTCCCACA AGCTGGCGGC CAAGGCCATA TCGCGCCTCC AGTCGCTGCC CGGCGGCGAC 
ATCGGGCTGC TGTGCGACAC GGTGGTGGAG GAGGTGCGCG AGCTGACGGG CTACGACCGC 
GTCATGGCCT ACAAGTTCCA CGACGACGAG CACGGCGAGG TGGTGGCGGA GATCCGGCGC 
TCCGACCTGG AGCCTTACCT GGGCCTGCAC TACCCGGCAA CCGACATTCC CCAGGCCTCC 
CGCTTCCTCT TCATGAAGAA CCGGGTACGC ATGATCTGCG ACTGCTCCGC GGCGCCCGTC 
AAGATCAGCC AGGACAAGGA TCTGCGGCAG CCCATCAGCT TGGCCGGCTC CACGCTGCGG 
GCACCCCACG GTTGCCACGC GCAGTACATG GGCAACATGG GCTCCGTCGC CTCGCTGGTG 
ATGGCGGTGA TCATCAACGA CAACGACGAC GAGTACCGCT CGTCGTCGGG CGGGGGTGGC 
GGCGGCGGCG GCGCGTACCA GCAGAAGGGC AGGAAGCTGT GGGGGATGGT GGTGTGCCAC 
CACACGTCGC CTCGCTCGGT GCCTTTCCCA CTGCGCTCCG CCTGCGAGTT CCTCATGCAA 
GTGTTTGGGC TCCAGCTCAA TATGGAGGTG GAGCTGGCAG CGCAGCTGCG GGAGAAGCAC 
ATCCTGCGCA CCCAGACACT CCTGTGTGAC ATGCTGCTCC GCGACGCCCC CATCGGCATT 
GTGTCGCAGT CACCAAACAT CATGGACCTG GTCAAGTGCG ATGGTGCTGC CCTCTACTAC 
GGCAAGCGCT TCTGGCTCTT GGGCGTCACG CCCAGCGAGG CGCAAATCAA GGACATTGCC 
GACTGGCTGC TGGAGCACCA CAAGGACTCC ACCGGCCTCA GCACCGACAG CCTGGCCGAC 
GCCGGCTACC CGGGTGCCGC GTCACTGGGC GACGAGGTGT GCGGCATGGC CGCGGCCAAG 
ATCACCGCCA AGGACTTTTT GTTTTGGTTC CGCTCCCACA CCGCCAAGGA GATCAAGTGG 
GGTGGCGCCA AGCACGACCC CGACGACAAG GACGACGGGC GCAAGATGCA CCCCCGCTCC 
TCGTTCAAGG CCTTCCTCGA GGTGGTGAAG CGGAGGAGCC TGCCATGGGA GGACGTGGAG 
ATGGACGCCA TACACTCGCT GCAGCTCATC CTCCGCGGCT CCTTCCACGA CATTGACGAC 
AGCGACACCA AGACCATGAT CCACGCGCGC CTCAACGACC TCAAGCTCCA GGGCATGGAC 
GAGCTGAGCA CTGTCGCCAA CGAGATGGTA CGCCTCATCG AGACCGCCAC CGCGCCCATC 
CTTGCTGTCG ACTCGAGCGG CTTTATCAAC GGCTGGAACG CAAAGGTGGC GGAGCTCACC 
GGGCTGCCCG TGACCGAGGC CATGGGGAGG TCCCTCGCCA AGGACCTGGT GCTGCAAGAG 
TCTGCGGACA TGGTGGAGAG GCTGCTCTAT CTGGCGCTTC AAGGCGACGA GGAGCAGAAC 
GTGGAGCTCA AGCTCAAGAC GTTCGGCGTT CAAAAGGACA AGGAGGCGGT CATTCTGGTC 
GTCAACGCGT GCGCCAGCAG GGACGTTTCG GACAATGTGG TGGGAGTGTG CTTCGTTGGC 
CAGGACGTGA CGGGGCAGAA GGTGGTAATG GACAAGTTCA CGCGCATCCA AGGCGACTAC 
AAGGCCATCG TGCAGAACCC CAACCCGCTG ATACCGCCAA TCTTTGGCGC TGACGAGTTT 
GGCTACTGCT CCGAGTGGAA TCCTGCCATG GAAAAGCTGT CTGGGTGGAA GCGGGAAGAA 
GTCCTGGGAA AGATGCTTGT CGGAGAGATA TTTGGCATCC AGATGATGTA CTGCCGCCTC 
AAAGGCCAGG ACGCCGTCAC CAAATTTATG ATCGTTCTCA ACAGCGCAGC AGATGGCCAG 
GACACGGAGA AGTTCCCCTT CGCCTTCTTT GATCGACAGG GCAAGTACGT CGAGGCTCTC 
CTCACGGCCA CCAAGCGGGC GGATGCCGAG GGTTCCATCA CCGGAGTGTT TTGCTTCCTA 
CATATTGCCA GTGCCGAGTT GCAACAGGCC TTGACAGTCC AAAGAGCCAC CGAGAAGGTT 
GCCTTGTCCA AGCTCAAAGA ACTGGCTTAC ATCCGCCAGG AGATAAAGAA TCCGCTCTAT 
GGCATCATGT TCACTCGGAC TCTCATGGAA ACCACCGACC TGTCCGAGGA TCAGAAGCAG 
TACGTAGAGA CTGGTGCTGT GTGCGAGAAG CAAATAAGGA AGATCCTGGA CGATATGGAC 
CTGGAAAGCA TTGAGGATGG CTACCTGGAG CTGGATACGA CTGAGTTCAT GATGGGGACG 
GTTATGGACG CTGTCATCAG CCAGGGCATG ATCACCTCTA AAGAAAAGAA CCTGCAGCTG 
ATTCGGGAGA CTCCAAAGGA GATCAAGGCC ATGTTTCTGT ACGGCGACCA GGTGCGCCTC 
CAGCAGGTTC TGGCAGATTT CCTGCTCAAC GCGATCCGCT TCACTCCGTC ATCCGAGAAT 
TGGGTGGGGA TAAAGGTGGC CACGTCTAGA AAGCGCTTGG GTGGTGGTGT GCATGTGATG 
CATCTCGAGT TCAGGATAAC TCACCCAGGT GTTGGCCTCC CTGAAGAGCT TGTCCAGGAG 
ATGTTTGACA GGGGCCGAGG TATGACACAG GAGGGCCTGG GCCTCAGCAT GTGCCGCAAA 
CTCGTCAAAC TCATGAACGG GGAAGTGGAG TACCTCAGGG AACCCGGCAA AAACTTCTTC 
CTGGTCAGCC TGGAGCTCCC CTTGGCACAA CGGGATGATG CCGGCAGCGT TAAGTTTCAA 
GCTTCCAGCT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC9634400 ( XM_002991073.2 ) cDNA ORF clone, Selaginella moellendorffii -> XP_002991119.1 Selaginella moellendorffii phytochrome 1 (LOC9634400), mRNA.

Price & Availability↑

CloneID	OSb04438
Clone ID Related Accession (Same CDS sequence)	XM_002991073.1 , XM_002991073.2
Accession Version	XM_002991073.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3432bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-04-11
Organism	Selaginella moellendorffii
Product	phytochrome 1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003314375.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 12, 2018 this sequence version replaced XM_002991073.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Selaginella moellendorffii Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTCGACCA CCAAGCTGAC TTACTCTTCG GGCAGCTCCG CCAAGTCCAA GCACAGCGTC 
CGTGTGGCAC AGACGACCGC GGATGCCAAG CTCCATGCCG TGTACGAGGA GTCTGGTGAG 
TCCGGGGACT CGTTCGACTA CACCAAGTCG GTGAATGCAA CCAAGTCCAC GGGCGAGAGC 
ATCCCGGCGC AGGCCGTCAC GGCCTACTTG CAGCGGATGC AGCGCGGTGG CCTGGTGCAG 
CCCTTCGGCT GTATGCTGGC GGTGGAGGAG GGCAGCTTCC GCGTGATTGC TTTCAGCGAC 
AATGCAGGGG AGATGCTGGA CCTCATGCCC CAGTCGGTCC CCAGCCTCGG CGCCGGGCAG 
CAGGATCTGC TGGGGATCGG CAGCGACGCG CGCAGCCTCT TCACGCCGGC CAGCGCCAGC 
GCCCTGGAGA AGGCGGCGGG CGCCATCGAC GTGAGCATGC TCAACCCCAT CTCCGTCCAC 
TGCAAGACGT CGGCCAAGCC CTTCTACGCC ATCGTCCATC GCATCGACGT GGGCCTGGTG 
CTGGACCTGG AGCCCGTCAA GGCCAGCGAC ACGAGCGTGG GATCCGCTGC CGGTGCGCTC 
CAGTCCCACA AGCTGGCGGC CAAGGCCATA TCGCGCCTCC AGTCGCTGCC CGGCGGCGAC 
ATCGGGCTGC TGTGCGACAC GGTGGTGGAG GAGGTGCGCG AGCTGACGGG CTACGACCGC 
GTCATGGCCT ACAAGTTCCA CGACGACGAG CACGGCGAGG TGGTGGCGGA GATCCGGCGC 
TCCGACCTGG AGCCTTACCT GGGCCTGCAC TACCCGGCAA CCGACATTCC CCAGGCCTCC 
CGCTTCCTCT TCATGAAGAA CCGGGTACGC ATGATCTGCG ACTGCTCCGC GGCGCCCGTC 
AAGATCAGCC AGGACAAGGA TCTGCGGCAG CCCATCAGCT TGGCCGGCTC CACGCTGCGG 
GCACCCCACG GTTGCCACGC GCAGTACATG GGCAACATGG GCTCCGTCGC CTCGCTGGTG 
ATGGCGGTGA TCATCAACGA CAACGACGAC GAGTACCGCT CGTCGTCGGG CGGGGGTGGC 
GGCGGCGGCG GCGCGTACCA GCAGAAGGGC AGGAAGCTGT GGGGGATGGT GGTGTGCCAC 
CACACGTCGC CTCGCTCGGT GCCTTTCCCA CTGCGCTCCG CCTGCGAGTT CCTCATGCAA 
GTGTTTGGGC TCCAGCTCAA TATGGAGGTG GAGCTGGCAG CGCAGCTGCG GGAGAAGCAC 
ATCCTGCGCA CCCAGACACT CCTGTGTGAC ATGCTGCTCC GCGACGCCCC CATCGGCATT 
GTGTCGCAGT CACCAAACAT CATGGACCTG GTCAAGTGCG ATGGTGCTGC CCTCTACTAC 
GGCAAGCGCT TCTGGCTCTT GGGCGTCACG CCCAGCGAGG CGCAAATCAA GGACATTGCC 
GACTGGCTGC TGGAGCACCA CAAGGACTCC ACCGGCCTCA GCACCGACAG CCTGGCCGAC 
GCCGGCTACC CGGGTGCCGC GTCACTGGGC GACGAGGTGT GCGGCATGGC CGCGGCCAAG 
ATCACCGCCA AGGACTTTTT GTTTTGGTTC CGCTCCCACA CCGCCAAGGA GATCAAGTGG 
GGTGGCGCCA AGCACGACCC CGACGACAAG GACGACGGGC GCAAGATGCA CCCCCGCTCC 
TCGTTCAAGG CCTTCCTCGA GGTGGTGAAG CGGAGGAGCC TGCCATGGGA GGACGTGGAG 
ATGGACGCCA TACACTCGCT GCAGCTCATC CTCCGCGGCT CCTTCCACGA CATTGACGAC 
AGCGACACCA AGACCATGAT CCACGCGCGC CTCAACGACC TCAAGCTCCA GGGCATGGAC 
GAGCTGAGCA CTGTCGCCAA CGAGATGGTA CGCCTCATCG AGACCGCCAC CGCGCCCATC 
CTTGCTGTCG ACTCGAGCGG CTTTATCAAC GGCTGGAACG CAAAGGTGGC GGAGCTCACC 
GGGCTGCCCG TGACCGAGGC CATGGGGAGG TCCCTCGCCA AGGACCTGGT GCTGCAAGAG 
TCTGCGGACA TGGTGGAGAG GCTGCTCTAT CTGGCGCTTC AAGGCGACGA GGAGCAGAAC 
GTGGAGCTCA AGCTCAAGAC GTTCGGCGTT CAAAAGGACA AGGAGGCGGT CATTCTGGTC 
GTCAACGCGT GCGCCAGCAG GGACGTTTCG GACAATGTGG TGGGAGTGTG CTTCGTTGGC 
CAGGACGTGA CGGGGCAGAA GGTGGTAATG GACAAGTTCA CGCGCATCCA AGGCGACTAC 
AAGGCCATCG TGCAGAACCC CAACCCGCTG ATACCGCCAA TCTTTGGCGC TGACGAGTTT 
GGCTACTGCT CCGAGTGGAA TCCTGCCATG GAAAAGCTGT CTGGGTGGAA GCGGGAAGAA 
GTCCTGGGAA AGATGCTTGT CGGAGAGATA TTTGGCATCC AGATGATGTA CTGCCGCCTC 
AAAGGCCAGG ACGCCGTCAC CAAATTTATG ATCGTTCTCA ACAGCGCAGC AGATGGCCAG 
GACACGGAGA AGTTCCCCTT CGCCTTCTTT GATCGACAGG GCAAGTACGT CGAGGCTCTC 
CTCACGGCCA CCAAGCGGGC GGATGCCGAG GGTTCCATCA CCGGAGTGTT TTGCTTCCTA 
CATATTGCCA GTGCCGAGTT GCAACAGGCC TTGACAGTCC AAAGAGCCAC CGAGAAGGTT 
GCCTTGTCCA AGCTCAAAGA ACTGGCTTAC ATCCGCCAGG AGATAAAGAA TCCGCTCTAT 
GGCATCATGT TCACTCGGAC TCTCATGGAA ACCACCGACC TGTCCGAGGA TCAGAAGCAG 
TACGTAGAGA CTGGTGCTGT GTGCGAGAAG CAAATAAGGA AGATCCTGGA CGATATGGAC 
CTGGAAAGCA TTGAGGATGG CTACCTGGAG CTGGATACGA CTGAGTTCAT GATGGGGACG 
GTTATGGACG CTGTCATCAG CCAGGGCATG ATCACCTCTA AAGAAAAGAA CCTGCAGCTG 
ATTCGGGAGA CTCCAAAGGA GATCAAGGCC ATGTTTCTGT ACGGCGACCA GGTGCGCCTC 
CAGCAGGTTC TGGCAGATTT CCTGCTCAAC GCGATCCGCT TCACTCCGTC ATCCGAGAAT 
TGGGTGGGGA TAAAGGTGGC CACGTCTAGA AAGCGCTTGG GTGGTGGTGT GCATGTGATG 
CATCTCGAGT TCAGGATAAC TCACCCAGGT GTTGGCCTCC CTGAAGAGCT TGTCCAGGAG 
ATGTTTGACA GGGGCCGAGG TATGACACAG GAGGGCCTGG GCCTCAGCAT GTGCCGCAAA 
CTCGTCAAAC TCATGAACGG GGAAGTGGAG TACCTCAGGG AACCCGGCAA AAACTTCTTC 
CTGGTCAGCC TGGAGCTCCC CTTGGCACAA CGGGATGATG CCGGCAGCGT TAAGTTTCAA 
GCTTCCAGCT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002991119.1
CDS	166..3597
Translation	MSTTKLTYSSGSSAKSKHSVRVAQTTADAKLHAVYEESGESGDSFDYTKSVNATKSTGESIPAQAVTAYLQRMQRGGLVQPFGCMLAVEEGSFRVIAFSDNAGEMLDLMPQSVPSLGAGQQDLLGIGSDARSLFTPASASALEKAAGAIDVSMLNPISVHCKTSAKPFYAIVHRIDVGLVLDLEPVKASDTSVGSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRELTGYDRVMAYKFHDDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCSAAPVKISQDKDLRQPISLAGSTLRAPHGCHAQYMGNMGSVASLVMAVIINDNDDEYRSSSGGGGGGGGAYQQKGRKLWGMVVCHHTSPRSVPFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGVTPSEAQIKDIADWLLEHHKDSTGLSTDSLADAGYPGAASLGDEVCGMAAAKITAKDFLFWFRSHTAKEIKWGGAKHDPDDKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFHDIDDSDTKTMIHARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAELTGLPVTEAMGRSLAKDLVLQESADMVERLLYLALQGDEEQNVELKLKTFGVQKDKEAVILVVNACASRDVSDNVVGVCFVGQDVTGQKVVMDKFTRIQGDYKAIVQNPNPLIPPIFGADEFGYCSEWNPAMEKLSGWKREEVLGKMLVGEIFGIQMMYCRLKGQDAVTKFMIVLNSAADGQDTEKFPFAFFDRQGKYVEALLTATKRADAEGSITGVFCFLHIASAELQQALTVQRATEKVALSKLKELAYIRQEIKNPLYGIMFTRTLMETTDLSEDQKQYVETGAVCEKQIRKILDDMDLESIEDGYLELDTTEFMMGTVMDAVISQGMITSKEKNLQLIRETPKEIKAMFLYGDQVRLQQVLADFLLNAIRFTPSSENWVGIKVATSRKRLGGGVHVMHLEFRITHPGVGLPEELVQEMFDRGRGMTQEGLGLSMCRKLVKLMNGEVEYLREPGKNFFLVSLELPLAQRDDAGSVKFQASS

Target ORF information:

RefSeq Version	XM_002991073.2
Organism	Selaginella moellendorffii
Definition	Selaginella moellendorffii phytochrome 1 (LOC9634400), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002991073.2

ORF Insert Sequence:

ATGTCGACCA CCAAGCTGAC TTACTCTTCG GGCAGCTCCG CCAAGTCCAA GCACAGCGTC 
CGTGTGGCAC AGACGACCGC GGATGCCAAG CTCCATGCCG TGTACGAGGA GTCTGGTGAG 
TCCGGGGACT CGTTCGACTA CACCAAGTCG GTGAATGCAA CCAAGTCCAC GGGCGAGAGC 
ATCCCGGCGC AGGCCGTCAC GGCCTACTTG CAGCGGATGC AGCGCGGTGG CCTGGTGCAG 
CCCTTCGGCT GTATGCTGGC GGTGGAGGAG GGCAGCTTCC GCGTGATTGC TTTCAGCGAC 
AATGCAGGGG AGATGCTGGA CCTCATGCCC CAGTCGGTCC CCAGCCTCGG CGCCGGGCAG 
CAGGATCTGC TGGGGATCGG CAGCGACGCG CGCAGCCTCT TCACGCCGGC CAGCGCCAGC 
GCCCTGGAGA AGGCGGCGGG CGCCATCGAC GTGAGCATGC TCAACCCCAT CTCCGTCCAC 
TGCAAGACGT CGGCCAAGCC CTTCTACGCC ATCGTCCATC GCATCGACGT GGGCCTGGTG 
CTGGACCTGG AGCCCGTCAA GGCCAGCGAC ACGAGCGTGG GATCCGCTGC CGGTGCGCTC 
CAGTCCCACA AGCTGGCGGC CAAGGCCATA TCGCGCCTCC AGTCGCTGCC CGGCGGCGAC 
ATCGGGCTGC TGTGCGACAC GGTGGTGGAG GAGGTGCGCG AGCTGACGGG CTACGACCGC 
GTCATGGCCT ACAAGTTCCA CGACGACGAG CACGGCGAGG TGGTGGCGGA GATCCGGCGC 
TCCGACCTGG AGCCTTACCT GGGCCTGCAC TACCCGGCAA CCGACATTCC CCAGGCCTCC 
CGCTTCCTCT TCATGAAGAA CCGGGTACGC ATGATCTGCG ACTGCTCCGC GGCGCCCGTC 
AAGATCAGCC AGGACAAGGA TCTGCGGCAG CCCATCAGCT TGGCCGGCTC CACGCTGCGG 
GCACCCCACG GTTGCCACGC GCAGTACATG GGCAACATGG GCTCCGTCGC CTCGCTGGTG 
ATGGCGGTGA TCATCAACGA CAACGACGAC GAGTACCGCT CGTCGTCGGG CGGGGGTGGC 
GGCGGCGGCG GCGCGTACCA GCAGAAGGGC AGGAAGCTGT GGGGGATGGT GGTGTGCCAC 
CACACGTCGC CTCGCTCGGT GCCTTTCCCA CTGCGCTCCG CCTGCGAGTT CCTCATGCAA 
GTGTTTGGGC TCCAGCTCAA TATGGAGGTG GAGCTGGCAG CGCAGCTGCG GGAGAAGCAC 
ATCCTGCGCA CCCAGACACT CCTGTGTGAC ATGCTGCTCC GCGACGCCCC CATCGGCATT 
GTGTCGCAGT CACCAAACAT CATGGACCTG GTCAAGTGCG ATGGTGCTGC CCTCTACTAC 
GGCAAGCGCT TCTGGCTCTT GGGCGTCACG CCCAGCGAGG CGCAAATCAA GGACATTGCC 
GACTGGCTGC TGGAGCACCA CAAGGACTCC ACCGGCCTCA GCACCGACAG CCTGGCCGAC 
GCCGGCTACC CGGGTGCCGC GTCACTGGGC GACGAGGTGT GCGGCATGGC CGCGGCCAAG 
ATCACCGCCA AGGACTTTTT GTTTTGGTTC CGCTCCCACA CCGCCAAGGA GATCAAGTGG 
GGTGGCGCCA AGCACGACCC CGACGACAAG GACGACGGGC GCAAGATGCA CCCCCGCTCC 
TCGTTCAAGG CCTTCCTCGA GGTGGTGAAG CGGAGGAGCC TGCCATGGGA GGACGTGGAG 
ATGGACGCCA TACACTCGCT GCAGCTCATC CTCCGCGGCT CCTTCCACGA CATTGACGAC 
AGCGACACCA AGACCATGAT CCACGCGCGC CTCAACGACC TCAAGCTCCA GGGCATGGAC 
GAGCTGAGCA CTGTCGCCAA CGAGATGGTA CGCCTCATCG AGACCGCCAC CGCGCCCATC 
CTTGCTGTCG ACTCGAGCGG CTTTATCAAC GGCTGGAACG CAAAGGTGGC GGAGCTCACC 
GGGCTGCCCG TGACCGAGGC CATGGGGAGG TCCCTCGCCA AGGACCTGGT GCTGCAAGAG 
TCTGCGGACA TGGTGGAGAG GCTGCTCTAT CTGGCGCTTC AAGGCGACGA GGAGCAGAAC 
GTGGAGCTCA AGCTCAAGAC GTTCGGCGTT CAAAAGGACA AGGAGGCGGT CATTCTGGTC 
GTCAACGCGT GCGCCAGCAG GGACGTTTCG GACAATGTGG TGGGAGTGTG CTTCGTTGGC 
CAGGACGTGA CGGGGCAGAA GGTGGTAATG GACAAGTTCA CGCGCATCCA AGGCGACTAC 
AAGGCCATCG TGCAGAACCC CAACCCGCTG ATACCGCCAA TCTTTGGCGC TGACGAGTTT 
GGCTACTGCT CCGAGTGGAA TCCTGCCATG GAAAAGCTGT CTGGGTGGAA GCGGGAAGAA 
GTCCTGGGAA AGATGCTTGT CGGAGAGATA TTTGGCATCC AGATGATGTA CTGCCGCCTC 
AAAGGCCAGG ACGCCGTCAC CAAATTTATG ATCGTTCTCA ACAGCGCAGC AGATGGCCAG 
GACACGGAGA AGTTCCCCTT CGCCTTCTTT GATCGACAGG GCAAGTACGT CGAGGCTCTC 
CTCACGGCCA CCAAGCGGGC GGATGCCGAG GGTTCCATCA CCGGAGTGTT TTGCTTCCTA 
CATATTGCCA GTGCCGAGTT GCAACAGGCC TTGACAGTCC AAAGAGCCAC CGAGAAGGTT 
GCCTTGTCCA AGCTCAAAGA ACTGGCTTAC ATCCGCCAGG AGATAAAGAA TCCGCTCTAT 
GGCATCATGT TCACTCGGAC TCTCATGGAA ACCACCGACC TGTCCGAGGA TCAGAAGCAG 
TACGTAGAGA CTGGTGCTGT GTGCGAGAAG CAAATAAGGA AGATCCTGGA CGATATGGAC 
CTGGAAAGCA TTGAGGATGG CTACCTGGAG CTGGATACGA CTGAGTTCAT GATGGGGACG 
GTTATGGACG CTGTCATCAG CCAGGGCATG ATCACCTCTA AAGAAAAGAA CCTGCAGCTG 
ATTCGGGAGA CTCCAAAGGA GATCAAGGCC ATGTTTCTGT ACGGCGACCA GGTGCGCCTC 
CAGCAGGTTC TGGCAGATTT CCTGCTCAAC GCGATCCGCT TCACTCCGTC ATCCGAGAAT 
TGGGTGGGGA TAAAGGTGGC CACGTCTAGA AAGCGCTTGG GTGGTGGTGT GCATGTGATG 
CATCTCGAGT TCAGGATAAC TCACCCAGGT GTTGGCCTCC CTGAAGAGCT TGTCCAGGAG 
ATGTTTGACA GGGGCCGAGG TATGACACAG GAGGGCCTGG GCCTCAGCAT GTGCCGCAAA 
CTCGTCAAAC TCATGAACGG GGAAGTGGAG TACCTCAGGG AACCCGGCAA AAACTTCTTC 
CTGGTCAGCC TGGAGCTCCC CTTGGCACAA CGGGATGATG CCGGCAGCGT TAAGTTTCAA 
GCTTCCAGCT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.
Science (New York, N.Y.)332(6032)960-3(2011 May)
Banks JA,Nishiyama T,Hasebe M,Bowman JL,Gribskov M,dePamphilis C,Albert VA,Aono N,Aoyama T,Ambrose BA,Ashton NW,Axtell MJ,Barker E,Barker MS,Bennetzen JL,Bonawitz ND,Chapple C,Cheng C,Correa LG,Dacre M,DeBarry J,Dreyer I,Elias M,Engstrom EM,Estelle M,Feng L,Finet C,Floyd SK,Frommer WB,Fujita T,Gramzow L,Gutensohn M,Harholt J,Hattori M,Heyl A,Hirai T,Hiwatashi Y,Ishikawa M,Iwata M,Karol KG,Koehler B,Kolukisaoglu U,Kubo M,Kurata T,Lalonde S,Li K,Li Y,Litt A,Lyons E,Manning G,Maruyama T,Michael TP,Mikami K,Miyazaki S,Morinaga S,Murata T,Mueller-Roeber B,Nelson DR,Obara M,Oguri Y,Olmstead RG,Onodera N,Petersen BL,Pils B,Prigge M,Rensing SA,Ria?o-Pach?n DM,Roberts AW,Sato Y,Scheller HV,Schulz B,Schulz C,Shakirov EV,Shibagaki N,Shinohara N,Shippen DE,S?rensen I,Sotooka R,Sugimoto N,Sugita M,Sumikawa N,Tanurdzic M,Theissen G,Ulvskov P,Wakazuki S,Weng JK,Willats WW,Wipf D,Wolf PG,Yang L,Zimmer AD,Zhu Q,Mitros T,Hellsten U,Loqu? D,Otillar R,Salamov A,Schmutz J,Shapiro H,Lindquist E,Lucas S,Rokhsar D,Grigoriev IV

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LOC9634400 cDNA ORF clone, Selaginella moellendorffii

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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