LOC689303 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC689303
Entrez Gene ID	689303
Full Name	similar to vitamin A-deficient testicular protein 11-like
General protein information	Preferred Names similar to vitamin A-deficient testicular protein 11-like Names spermatogenesis-associated protein 31A6-like
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 17 Map Location: 17p14

mRNA and Protein(s)

mRNA	Protein	Name
XM_017587686.1	XP_017443175.1	spermatogenesis-associated protein 31A6-like
XM_008773958.2	XP_008772180.1	spermatogenesis-associated protein 31A6-like

Pathways from BioSystems
Gene Ontology

The following LOC689303 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC689303 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa20609	XM_008773958.2 Latest version!	Rattus norvegicus similar to vitamin A-deficient testicular protein 11-like (LOC689303), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$559.30 $799.00
ORa20609	XM_017587686.1 Latest version!	Rattus norvegicus similar to vitamin A-deficient testicular protein 11-like (LOC689303), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$559.30 $799.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC689303 ( XM_017587686.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_017443175.1 Rattus norvegicus similar to vitamin A-deficient testicular protein 11-like (LOC689303), transcript variant X3, mRNA.

Price & Availability↑

CloneID	ORa20609
Clone ID Related Accession (Same CDS sequence)	XM_017587686.1 , XM_008773958.2
Accession Version	XM_017587686.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3486bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	spermatogenesis-associated protein 31A6-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (AC_000085.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGAGAT TTCTCAATCT GATGAAAGGC ATTCTTTACT CATGGATGAG CCCCAACTCT 
GTGAACACAG CAATGGACCT GAGCATTGCC ATTCTGTGTG GGGTGGGGCT CTTTTTCCTA 
CTAATCACCT TCCTGAAGGA CTGCCCACTG TCACCAGCTT CTGGAAACAA AACAGACATC 
CCAAAGGATG TGAAGAGGGG GCAGAGCAAC ACCAGGAGGA AAACTGATGT GGAAAAAGGT 
TGTAGAGATG GAGGGGAAAA TGTGGAAGAG ACCAAGACTC CATCACAACC TATGAAAATT 
CTGACTAGGC AACTTCTCCA GGACTCTACA CCACAACCCT TTTGGAACTC AAGTCAGAAA 
ACGGACCACC TTTTACTCTC TGAGCTGTTT TCTTCCCTCA TGAGCTTAGA GGATCTTATA 
TTGCAGAAAT TTAATCGATG TTTCTGGGGC ACATCCTCTA TTTTCTCTGA ATCAGTTGTG 
GCTATGGCCC ATGTCCTCAG AAACCCTTGC TTTGAACAAC AGAAATCTGT GAGGTTTAGT 
GATCCCTGTG TCCCTGCCCA AGCTCCATCC CAGGCTCAAG GACTTCAGCA TTACTGGTAC 
CAGCCACTGC CTCACGAACA TAGGAAAACA AGCTTGGTAG ATCTGACATG GGTCCCAGAA 
AAGGAAATCC TCCCAAGATC TACCCCAAAA CAAATACATC CCAGTTTGAA GAGAAGGGCC 
TATGGAGTGT CATGTCCTAC CACTGAGAAA GGGATCCAGA CATCCCTACC CCCTGAATGC 
CTGTCCCATA AACATGGACT GTATTCTAAA GCCGTCAAAG GTTATGTTAA ACGAAACCAT 
CAAAAAGCCA TTGGAAAGCC CCCTGGGAAC TTGCCCAGGG ACACCCTGAA GACTAAGGCT 
ATCAGGCCTG CATCTGAGCA TCTTCGGATG TTCCAGTACC ACAAGGTGCC ACAGACTAAA 
GAAAAAGCAA CAAATGTGGG AGAACAACAA GGAACCCACA TCAGATTCCC TCCATCCAAG 
AAACTGAAGC AGCTTCAGGG ACGTTTCCCA CCAAACACTG ATCATTATTG CAAGAGAAGG 
CCTCAACTCT CCCAGCCTGG CCAGCCCTCC ATCCTCAATT CCAAGAGCTA CAATTTAGGC 
AAAATCTTAG CGTCTGTGTT TGCAGGGATG ACCTTAATGA AGGACAGAGC AGACTGTACT 
ATGCAGTCTC AAGTCTCCCA GGCTCCACAG GCTTCCGTCC GCAACTCCAA AAGGTACAAA 
CATAGTAAAA GGATGGGGTC TGAGCCCAGA AGGGTGCCCT TAAAGAAAGA CACAGCAAGG 
TATGATATGG GAAAGCCCAT CAAGAAGGGA CGTGGTGCTG GGGCAAAAAA TGTGCCTCAC 
AGTTCATGGA GCATCACTGG GAAGGGGCTG AAAGCCAGGA ACCCTGCACT GAGGACAGAC 
GAGCTGTCCG ACATAAACCC TACTGACGAT CATTCTCTGC ATGACTTAGA GGCTAAAAGG 
AAGCTGGCAT CAAATAGCAC AAAACTTCCA GTCAAACACA GAAGGACACC ATATCTACAG 
ATCCTTGAGG CACTGGATCC CACCCCATAT AGGGTTCCAG CCTCAAAATG TTCCCGTGTT 
GTATTTCCCT CCTCACTCAT CTGGGATTCC AAGGAGGAAT ACTACTCCAA GGCTGCCGTG 
ATCCTGGAAA ATTTGCATCA CCAGGACCCA GGAGGGACAA GGGTAGAAAG TGCATCAGCT 
GCCAGTCTAG AGAGGGCTCT GTCTATGCAC TCAACTGCAG AGGTGCAGAA GACACAAAGA 
GCCCCTCCAC CTGCTGCCAG CCATAGACTC CCAAAAACAC ATCCAGATCT ACTGAAGAGA 
AACCTGAGTA TTCAGCGCTC TGCTTTGTAC TTTGAGGCAA AACCGCAGGA GGGCAGGATT 
ATCCGAGGGA TTGGAAAGGG CAGCCTACAA CAAAATAACA ACCCCCAAAA GGCCAAGCAT 
GCACCACTCA AGAGCTTTCA TGAGGGGGAC TCAAGACATC ACTTGTGGAA TGGGACAGTG 
GTGGGCCCTG GAGAAAGGGC TTCAGCAGCC AAACAGACTA AAGCAGGGGA GGTAAAAAAA 
GAGACACCTT ATGCATGGAG AGGGAGTCTG GGATCCAACG AGAGTCACAC TGGCAAGGAC 
ATCAATATCA GTCCCAGGGT CTTTGGCTCT TTAGGGGCCA AGAGAAGCCC AGGCCATCTC 
CAAACATGTA CTCCACAACA CTCGCAGGAC TCAACTCTAA GAACACAAGG GTACAGGAAT 
ATCAGTGTCA GTTCAAACAA GCAGCCACAG CCCAGGCCCG GGAGACACGA TCCAGAATGC 
CCCAGTACAG TACACCCTGC CAAGGTCAAC TTGTCTTCAG AGCACTCAAT GTCCAGCTTC 
CAGAATACGT GCCAAAAGCC AAAGACTGCC CAGGGCTCAT GTGATGTCTT CCTGAGGACG 
CATGAGAGGG CAGATACTGA AGAGAATAGA GTCCTGAAGG ATAAGATTAG AATAAATCAT 
CTCAAGGACT TGTGTCTCCA CAAAGAGAGG CAGGGTTCTA TAAGACCTAC AGCCATAAGC 
CAGGGAGAAA GGCTTGGGAG ATCAAGGCCT TGTAGCCTGA GCTCCACACA GCTCAAGGAT 
ACAGTAAAGA CTCGGACATC AGATAAAGGA GAGGCTACTT CTAAAAGCTC TTGGAAGAGC 
GACATAAGGG AGATTTTAAA ACATGGATAT GTTGGCTCCA AAGACATTGG ACAAGGGGAC 
ACTTCAAAGA AAGATCAGCC CCCAGCAGTG GCTGAGCGGA CAGAGGAAGA CTGGACAGGG 
AAAAAGGTCA TCTGCAGTAT GATAGCTCAC CTGCAATACC TTATGAACTT TCTGTTTGAG 
GTCATAGAGG ACACTGAACA GGACACATCA AAGGTACAAG GGTGTGAAAT AGAATCCCTG 
AAATTCCAGC TGGGTAGCTC ATCCCACTCT TCTGAGGGTG TCTATGGCAT AAATCAAGGT 
ACACCAGCAA GCACAGTGAG CAGGGGCCAC ACCAGCCCCG AGATGCATAA CTGTTCCTTC 
ACAAAAAGAG GGATTGGAGA CAAAACACAG TCAGGGATTA AAGCCAAGAC AGCCTGTGAC 
CAACATCTGA ACCAGGTGAA CAGAGGGATG TTCTCAGACC AGCTCCCTAT GCCCAAAAAA 
TATGACCTTT CACGTATGTA CAGGGGAATT CAACACCAGC AGGAGCTGGG TCTCACAGAC 
CAGACCTGTG ACCAACATAA AATTACAGAA AAGTTAGGAA TGACCCACTG TCCACATGGA 
GGCACCAAGG GGCACAACCA TTCCTTTGGA TATAGAAAAC TTGGAGACCA ACAACAGCCA 
GACTTTACCC ATAAGGCCTT GGACCCACAT CAAAGTGCAA AGGAAGACAT GGGCTGTGTC 
TCCTGTCTGA GTCCCAAAGG GAGCCGTCCA GTCAAGCACA GGAGAACTGA CTGCTTCTCA 
CCTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017443175.1
CDS	3677..7162
Translation	MERFLNLMKGILYSWMSPNSVNTAMDLSIAILCGVGLFFLLITFLKDCPLSPASGNKTDIPKDVKRGQSNTRRKTDVEKGCRDGGENVEETKTPSQPMKILTRQLLQDSTPQPFWNSSQKTDHLLLSELFSSLMSLEDLILQKFNRCFWGTSSIFSESVVAMAHVLRNPCFEQQKSVRFSDPCVPAQAPSQAQGLQHYWYQPLPHEHRKTSLVDLTWVPEKEILPRSTPKQIHPSLKRRAYGVSCPTTEKGIQTSLPPECLSHKHGLYSKAVKGYVKRNHQKAIGKPPGNLPRDTLKTKAIRPASEHLRMFQYHKVPQTKEKATNVGEQQGTHIRFPPSKKLKQLQGRFPPNTDHYCKRRPQLSQPGQPSILNSKSYNLGKILASVFAGMTLMKDRADCTMQSQVSQAPQASVRNSKRYKHSKRMGSEPRRVPLKKDTARYDMGKPIKKGRGAGAKNVPHSSWSITGKGLKARNPALRTDELSDINPTDDHSLHDLEAKRKLASNSTKLPVKHRRTPYLQILEALDPTPYRVPASKCSRVVFPSSLIWDSKEEYYSKAAVILENLHHQDPGGTRVESASAASLERALSMHSTAEVQKTQRAPPPAASHRLPKTHPDLLKRNLSIQRSALYFEAKPQEGRIIRGIGKGSLQQNNNPQKAKHAPLKSFHEGDSRHHLWNGTVVGPGERASAAKQTKAGEVKKETPYAWRGSLGSNESHTGKDINISPRVFGSLGAKRSPGHLQTCTPQHSQDSTLRTQGYRNISVSSNKQPQPRPGRHDPECPSTVHPAKVNLSSEHSMSSFQNTCQKPKTAQGSCDVFLRTHERADTEENRVLKDKIRINHLKDLCLHKERQGSIRPTAISQGERLGRSRPCSLSSTQLKDTVKTRTSDKGEATSKSSWKSDIREILKHGYVGSKDIGQGDTSKKDQPPAVAERTEEDWTGKKVICSMIAHLQYLMNFLFEVIEDTEQDTSKVQGCEIESLKFQLGSSSHSSEGVYGINQGTPASTVSRGHTSPEMHNCSFTKRGIGDKTQSGIKAKTACDQHLNQVNRGMFSDQLPMPKKYDLSRMYRGIQHQQELGLTDQTCDQHKITEKLGMTHCPHGGTKGHNHSFGYRKLGDQQQPDFTHKALDPHQSAKEDMGCVSCLSPKGSRPVKHRRTDCFSP

Target ORF information:

RefSeq Version	XM_017587686.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus similar to vitamin A-deficient testicular protein 11-like (LOC689303), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017587686.1

ORF Insert Sequence:

ATGGAGAGAT TTCTCAATCT GATGAAAGGC ATTCTTTACT CATGGATGAG CCCCAACTCT 
GTGAACACAG CAATGGACCT GAGCATTGCC ATTCTGTGTG GGGTGGGGCT CTTTTTCCTA 
CTAATCACCT TCCTGAAGGA CTGCCCACTG TCACCAGCTT CTGGAAACAA AACAGACATC 
CCAAAGGATG TGAAGAGGGG GCAGAGCAAC ACCAGGAGGA AAACTGATGT GGAAAAAGGT 
TGTAGAGATG GAGGGGAAAA TGTGGAAGAG ACCAAGACTC CATCACAACC TATGAAAATT 
CTGACTAGGC AACTTCTCCA GGACTCTACA CCACAACCCT TTTGGAACTC AAGTCAGAAA 
ACGGACCACC TTTTACTCTC TGAGCTGTTT TCTTCCCTCA TGAGCTTAGA GGATCTTATA 
TTGCAGAAAT TTAATCGATG TTTCTGGGGC ACATCCTCTA TTTTCTCTGA ATCAGTTGTG 
GCTATGGCCC ATGTCCTCAG AAACCCTTGC TTTGAACAAC AGAAATCTGT GAGGTTTAGT 
GATCCCTGTG TCCCTGCCCA AGCTCCATCC CAGGCTCAAG GACTTCAGCA TTACTGGTAC 
CAGCCACTGC CTCACGAACA TAGGAAAACA AGCTTGGTAG ATCTGACATG GGTCCCAGAA 
AAGGAAATCC TCCCAAGATC TACCCCAAAA CAAATACATC CCAGTTTGAA GAGAAGGGCC 
TATGGAGTGT CATGTCCTAC CACTGAGAAA GGGATCCAGA CATCCCTACC CCCTGAATGC 
CTGTCCCATA AACATGGACT GTATTCTAAA GCCGTCAAAG GTTATGTTAA ACGAAACCAT 
CAAAAAGCCA TTGGAAAGCC CCCTGGGAAC TTGCCCAGGG ACACCCTGAA GACTAAGGCT 
ATCAGGCCTG CATCTGAGCA TCTTCGGATG TTCCAGTACC ACAAGGTGCC ACAGACTAAA 
GAAAAAGCAA CAAATGTGGG AGAACAACAA GGAACCCACA TCAGATTCCC TCCATCCAAG 
AAACTGAAGC AGCTTCAGGG ACGTTTCCCA CCAAACACTG ATCATTATTG CAAGAGAAGG 
CCTCAACTCT CCCAGCCTGG CCAGCCCTCC ATCCTCAATT CCAAGAGCTA CAATTTAGGC 
AAAATCTTAG CGTCTGTGTT TGCAGGGATG ACCTTAATGA AGGACAGAGC AGACTGTACT 
ATGCAGTCTC AAGTCTCCCA GGCTCCACAG GCTTCCGTCC GCAACTCCAA AAGGTACAAA 
CATAGTAAAA GGATGGGGTC TGAGCCCAGA AGGGTGCCCT TAAAGAAAGA CACAGCAAGG 
TATGATATGG GAAAGCCCAT CAAGAAGGGA CGTGGTGCTG GGGCAAAAAA TGTGCCTCAC 
AGTTCATGGA GCATCACTGG GAAGGGGCTG AAAGCCAGGA ACCCTGCACT GAGGACAGAC 
GAGCTGTCCG ACATAAACCC TACTGACGAT CATTCTCTGC ATGACTTAGA GGCTAAAAGG 
AAGCTGGCAT CAAATAGCAC AAAACTTCCA GTCAAACACA GAAGGACACC ATATCTACAG 
ATCCTTGAGG CACTGGATCC CACCCCATAT AGGGTTCCAG CCTCAAAATG TTCCCGTGTT 
GTATTTCCCT CCTCACTCAT CTGGGATTCC AAGGAGGAAT ACTACTCCAA GGCTGCCGTG 
ATCCTGGAAA ATTTGCATCA CCAGGACCCA GGAGGGACAA GGGTAGAAAG TGCATCAGCT 
GCCAGTCTAG AGAGGGCTCT GTCTATGCAC TCAACTGCAG AGGTGCAGAA GACACAAAGA 
GCCCCTCCAC CTGCTGCCAG CCATAGACTC CCAAAAACAC ATCCAGATCT ACTGAAGAGA 
AACCTGAGTA TTCAGCGCTC TGCTTTGTAC TTTGAGGCAA AACCGCAGGA GGGCAGGATT 
ATCCGAGGGA TTGGAAAGGG CAGCCTACAA CAAAATAACA ACCCCCAAAA GGCCAAGCAT 
GCACCACTCA AGAGCTTTCA TGAGGGGGAC TCAAGACATC ACTTGTGGAA TGGGACAGTG 
GTGGGCCCTG GAGAAAGGGC TTCAGCAGCC AAACAGACTA AAGCAGGGGA GGTAAAAAAA 
GAGACACCTT ATGCATGGAG AGGGAGTCTG GGATCCAACG AGAGTCACAC TGGCAAGGAC 
ATCAATATCA GTCCCAGGGT CTTTGGCTCT TTAGGGGCCA AGAGAAGCCC AGGCCATCTC 
CAAACATGTA CTCCACAACA CTCGCAGGAC TCAACTCTAA GAACACAAGG GTACAGGAAT 
ATCAGTGTCA GTTCAAACAA GCAGCCACAG CCCAGGCCCG GGAGACACGA TCCAGAATGC 
CCCAGTACAG TACACCCTGC CAAGGTCAAC TTGTCTTCAG AGCACTCAAT GTCCAGCTTC 
CAGAATACGT GCCAAAAGCC AAAGACTGCC CAGGGCTCAT GTGATGTCTT CCTGAGGACG 
CATGAGAGGG CAGATACTGA AGAGAATAGA GTCCTGAAGG ATAAGATTAG AATAAATCAT 
CTCAAGGACT TGTGTCTCCA CAAAGAGAGG CAGGGTTCTA TAAGACCTAC AGCCATAAGC 
CAGGGAGAAA GGCTTGGGAG ATCAAGGCCT TGTAGCCTGA GCTCCACACA GCTCAAGGAT 
ACAGTAAAGA CTCGGACATC AGATAAAGGA GAGGCTACTT CTAAAAGCTC TTGGAAGAGC 
GACATAAGGG AGATTTTAAA ACATGGATAT GTTGGCTCCA AAGACATTGG ACAAGGGGAC 
ACTTCAAAGA AAGATCAGCC CCCAGCAGTG GCTGAGCGGA CAGAGGAAGA CTGGACAGGG 
AAAAAGGTCA TCTGCAGTAT GATAGCTCAC CTGCAATACC TTATGAACTT TCTGTTTGAG 
GTCATAGAGG ACACTGAACA GGACACATCA AAGGTACAAG GGTGTGAAAT AGAATCCCTG 
AAATTCCAGC TGGGTAGCTC ATCCCACTCT TCTGAGGGTG TCTATGGCAT AAATCAAGGT 
ACACCAGCAA GCACAGTGAG CAGGGGCCAC ACCAGCCCCG AGATGCATAA CTGTTCCTTC 
ACAAAAAGAG GGATTGGAGA CAAAACACAG TCAGGGATTA AAGCCAAGAC AGCCTGTGAC 
CAACATCTGA ACCAGGTGAA CAGAGGGATG TTCTCAGACC AGCTCCCTAT GCCCAAAAAA 
TATGACCTTT CACGTATGTA CAGGGGAATT CAACACCAGC AGGAGCTGGG TCTCACAGAC 
CAGACCTGTG ACCAACATAA AATTACAGAA AAGTTAGGAA TGACCCACTG TCCACATGGA 
GGCACCAAGG GGCACAACCA TTCCTTTGGA TATAGAAAAC TTGGAGACCA ACAACAGCCA 
GACTTTACCC ATAAGGCCTT GGACCCACAT CAAAGTGCAA AGGAAGACAT GGGCTGTGTC 
TCCTGTCTGA GTCCCAAAGG GAGCCGTCCA GTCAAGCACA GGAGAACTGA CTGCTTCTCA 
CCTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC689303 ( XM_008773958.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_008772180.1 Rattus norvegicus similar to vitamin A-deficient testicular protein 11-like (LOC689303), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ORa20609
Clone ID Related Accession (Same CDS sequence)	XM_017587686.1 , XM_008773958.2
Accession Version	XM_008773958.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3486bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	spermatogenesis-associated protein 31A6-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (AC_000085.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008773958.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGAGAT TTCTCAATCT GATGAAAGGC ATTCTTTACT CATGGATGAG CCCCAACTCT 
GTGAACACAG CAATGGACCT GAGCATTGCC ATTCTGTGTG GGGTGGGGCT CTTTTTCCTA 
CTAATCACCT TCCTGAAGGA CTGCCCACTG TCACCAGCTT CTGGAAACAA AACAGACATC 
CCAAAGGATG TGAAGAGGGG GCAGAGCAAC ACCAGGAGGA AAACTGATGT GGAAAAAGGT 
TGTAGAGATG GAGGGGAAAA TGTGGAAGAG ACCAAGACTC CATCACAACC TATGAAAATT 
CTGACTAGGC AACTTCTCCA GGACTCTACA CCACAACCCT TTTGGAACTC AAGTCAGAAA 
ACGGACCACC TTTTACTCTC TGAGCTGTTT TCTTCCCTCA TGAGCTTAGA GGATCTTATA 
TTGCAGAAAT TTAATCGATG TTTCTGGGGC ACATCCTCTA TTTTCTCTGA ATCAGTTGTG 
GCTATGGCCC ATGTCCTCAG AAACCCTTGC TTTGAACAAC AGAAATCTGT GAGGTTTAGT 
GATCCCTGTG TCCCTGCCCA AGCTCCATCC CAGGCTCAAG GACTTCAGCA TTACTGGTAC 
CAGCCACTGC CTCACGAACA TAGGAAAACA AGCTTGGTAG ATCTGACATG GGTCCCAGAA 
AAGGAAATCC TCCCAAGATC TACCCCAAAA CAAATACATC CCAGTTTGAA GAGAAGGGCC 
TATGGAGTGT CATGTCCTAC CACTGAGAAA GGGATCCAGA CATCCCTACC CCCTGAATGC 
CTGTCCCATA AACATGGACT GTATTCTAAA GCCGTCAAAG GTTATGTTAA ACGAAACCAT 
CAAAAAGCCA TTGGAAAGCC CCCTGGGAAC TTGCCCAGGG ACACCCTGAA GACTAAGGCT 
ATCAGGCCTG CATCTGAGCA TCTTCGGATG TTCCAGTACC ACAAGGTGCC ACAGACTAAA 
GAAAAAGCAA CAAATGTGGG AGAACAACAA GGAACCCACA TCAGATTCCC TCCATCCAAG 
AAACTGAAGC AGCTTCAGGG ACGTTTCCCA CCAAACACTG ATCATTATTG CAAGAGAAGG 
CCTCAACTCT CCCAGCCTGG CCAGCCCTCC ATCCTCAATT CCAAGAGCTA CAATTTAGGC 
AAAATCTTAG CGTCTGTGTT TGCAGGGATG ACCTTAATGA AGGACAGAGC AGACTGTACT 
ATGCAGTCTC AAGTCTCCCA GGCTCCACAG GCTTCCGTCC GCAACTCCAA AAGGTACAAA 
CATAGTAAAA GGATGGGGTC TGAGCCCAGA AGGGTGCCCT TAAAGAAAGA CACAGCAAGG 
TATGATATGG GAAAGCCCAT CAAGAAGGGA CGTGGTGCTG GGGCAAAAAA TGTGCCTCAC 
AGTTCATGGA GCATCACTGG GAAGGGGCTG AAAGCCAGGA ACCCTGCACT GAGGACAGAC 
GAGCTGTCCG ACATAAACCC TACTGACGAT CATTCTCTGC ATGACTTAGA GGCTAAAAGG 
AAGCTGGCAT CAAATAGCAC AAAACTTCCA GTCAAACACA GAAGGACACC ATATCTACAG 
ATCCTTGAGG CACTGGATCC CACCCCATAT AGGGTTCCAG CCTCAAAATG TTCCCGTGTT 
GTATTTCCCT CCTCACTCAT CTGGGATTCC AAGGAGGAAT ACTACTCCAA GGCTGCCGTG 
ATCCTGGAAA ATTTGCATCA CCAGGACCCA GGAGGGACAA GGGTAGAAAG TGCATCAGCT 
GCCAGTCTAG AGAGGGCTCT GTCTATGCAC TCAACTGCAG AGGTGCAGAA GACACAAAGA 
GCCCCTCCAC CTGCTGCCAG CCATAGACTC CCAAAAACAC ATCCAGATCT ACTGAAGAGA 
AACCTGAGTA TTCAGCGCTC TGCTTTGTAC TTTGAGGCAA AACCGCAGGA GGGCAGGATT 
ATCCGAGGGA TTGGAAAGGG CAGCCTACAA CAAAATAACA ACCCCCAAAA GGCCAAGCAT 
GCACCACTCA AGAGCTTTCA TGAGGGGGAC TCAAGACATC ACTTGTGGAA TGGGACAGTG 
GTGGGCCCTG GAGAAAGGGC TTCAGCAGCC AAACAGACTA AAGCAGGGGA GGTAAAAAAA 
GAGACACCTT ATGCATGGAG AGGGAGTCTG GGATCCAACG AGAGTCACAC TGGCAAGGAC 
ATCAATATCA GTCCCAGGGT CTTTGGCTCT TTAGGGGCCA AGAGAAGCCC AGGCCATCTC 
CAAACATGTA CTCCACAACA CTCGCAGGAC TCAACTCTAA GAACACAAGG GTACAGGAAT 
ATCAGTGTCA GTTCAAACAA GCAGCCACAG CCCAGGCCCG GGAGACACGA TCCAGAATGC 
CCCAGTACAG TACACCCTGC CAAGGTCAAC TTGTCTTCAG AGCACTCAAT GTCCAGCTTC 
CAGAATACGT GCCAAAAGCC AAAGACTGCC CAGGGCTCAT GTGATGTCTT CCTGAGGACG 
CATGAGAGGG CAGATACTGA AGAGAATAGA GTCCTGAAGG ATAAGATTAG AATAAATCAT 
CTCAAGGACT TGTGTCTCCA CAAAGAGAGG CAGGGTTCTA TAAGACCTAC AGCCATAAGC 
CAGGGAGAAA GGCTTGGGAG ATCAAGGCCT TGTAGCCTGA GCTCCACACA GCTCAAGGAT 
ACAGTAAAGA CTCGGACATC AGATAAAGGA GAGGCTACTT CTAAAAGCTC TTGGAAGAGC 
GACATAAGGG AGATTTTAAA ACATGGATAT GTTGGCTCCA AAGACATTGG ACAAGGGGAC 
ACTTCAAAGA AAGATCAGCC CCCAGCAGTG GCTGAGCGGA CAGAGGAAGA CTGGACAGGG 
AAAAAGGTCA TCTGCAGTAT GATAGCTCAC CTGCAATACC TTATGAACTT TCTGTTTGAG 
GTCATAGAGG ACACTGAACA GGACACATCA AAGGTACAAG GGTGTGAAAT AGAATCCCTG 
AAATTCCAGC TGGGTAGCTC ATCCCACTCT TCTGAGGGTG TCTATGGCAT AAATCAAGGT 
ACACCAGCAA GCACAGTGAG CAGGGGCCAC ACCAGCCCCG AGATGCATAA CTGTTCCTTC 
ACAAAAAGAG GGATTGGAGA CAAAACACAG TCAGGGATTA AAGCCAAGAC AGCCTGTGAC 
CAACATCTGA ACCAGGTGAA CAGAGGGATG TTCTCAGACC AGCTCCCTAT GCCCAAAAAA 
TATGACCTTT CACGTATGTA CAGGGGAATT CAACACCAGC AGGAGCTGGG TCTCACAGAC 
CAGACCTGTG ACCAACATAA AATTACAGAA AAGTTAGGAA TGACCCACTG TCCACATGGA 
GGCACCAAGG GGCACAACCA TTCCTTTGGA TATAGAAAAC TTGGAGACCA ACAACAGCCA 
GACTTTACCC ATAAGGCCTT GGACCCACAT CAAAGTGCAA AGGAAGACAT GGGCTGTGTC 
TCCTGTCTGA GTCCCAAAGG GAGCCGTCCA GTCAAGCACA GGAGAACTGA CTGCTTCTCA 
CCTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008772180.1
CDS	3541..7026
Translation	MERFLNLMKGILYSWMSPNSVNTAMDLSIAILCGVGLFFLLITFLKDCPLSPASGNKTDIPKDVKRGQSNTRRKTDVEKGCRDGGENVEETKTPSQPMKILTRQLLQDSTPQPFWNSSQKTDHLLLSELFSSLMSLEDLILQKFNRCFWGTSSIFSESVVAMAHVLRNPCFEQQKSVRFSDPCVPAQAPSQAQGLQHYWYQPLPHEHRKTSLVDLTWVPEKEILPRSTPKQIHPSLKRRAYGVSCPTTEKGIQTSLPPECLSHKHGLYSKAVKGYVKRNHQKAIGKPPGNLPRDTLKTKAIRPASEHLRMFQYHKVPQTKEKATNVGEQQGTHIRFPPSKKLKQLQGRFPPNTDHYCKRRPQLSQPGQPSILNSKSYNLGKILASVFAGMTLMKDRADCTMQSQVSQAPQASVRNSKRYKHSKRMGSEPRRVPLKKDTARYDMGKPIKKGRGAGAKNVPHSSWSITGKGLKARNPALRTDELSDINPTDDHSLHDLEAKRKLASNSTKLPVKHRRTPYLQILEALDPTPYRVPASKCSRVVFPSSLIWDSKEEYYSKAAVILENLHHQDPGGTRVESASAASLERALSMHSTAEVQKTQRAPPPAASHRLPKTHPDLLKRNLSIQRSALYFEAKPQEGRIIRGIGKGSLQQNNNPQKAKHAPLKSFHEGDSRHHLWNGTVVGPGERASAAKQTKAGEVKKETPYAWRGSLGSNESHTGKDINISPRVFGSLGAKRSPGHLQTCTPQHSQDSTLRTQGYRNISVSSNKQPQPRPGRHDPECPSTVHPAKVNLSSEHSMSSFQNTCQKPKTAQGSCDVFLRTHERADTEENRVLKDKIRINHLKDLCLHKERQGSIRPTAISQGERLGRSRPCSLSSTQLKDTVKTRTSDKGEATSKSSWKSDIREILKHGYVGSKDIGQGDTSKKDQPPAVAERTEEDWTGKKVICSMIAHLQYLMNFLFEVIEDTEQDTSKVQGCEIESLKFQLGSSSHSSEGVYGINQGTPASTVSRGHTSPEMHNCSFTKRGIGDKTQSGIKAKTACDQHLNQVNRGMFSDQLPMPKKYDLSRMYRGIQHQQELGLTDQTCDQHKITEKLGMTHCPHGGTKGHNHSFGYRKLGDQQQPDFTHKALDPHQSAKEDMGCVSCLSPKGSRPVKHRRTDCFSP

Target ORF information:

RefSeq Version	XM_008773958.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus similar to vitamin A-deficient testicular protein 11-like (LOC689303), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008773958.2

ORF Insert Sequence:

ATGGAGAGAT TTCTCAATCT GATGAAAGGC ATTCTTTACT CATGGATGAG CCCCAACTCT 
GTGAACACAG CAATGGACCT GAGCATTGCC ATTCTGTGTG GGGTGGGGCT CTTTTTCCTA 
CTAATCACCT TCCTGAAGGA CTGCCCACTG TCACCAGCTT CTGGAAACAA AACAGACATC 
CCAAAGGATG TGAAGAGGGG GCAGAGCAAC ACCAGGAGGA AAACTGATGT GGAAAAAGGT 
TGTAGAGATG GAGGGGAAAA TGTGGAAGAG ACCAAGACTC CATCACAACC TATGAAAATT 
CTGACTAGGC AACTTCTCCA GGACTCTACA CCACAACCCT TTTGGAACTC AAGTCAGAAA 
ACGGACCACC TTTTACTCTC TGAGCTGTTT TCTTCCCTCA TGAGCTTAGA GGATCTTATA 
TTGCAGAAAT TTAATCGATG TTTCTGGGGC ACATCCTCTA TTTTCTCTGA ATCAGTTGTG 
GCTATGGCCC ATGTCCTCAG AAACCCTTGC TTTGAACAAC AGAAATCTGT GAGGTTTAGT 
GATCCCTGTG TCCCTGCCCA AGCTCCATCC CAGGCTCAAG GACTTCAGCA TTACTGGTAC 
CAGCCACTGC CTCACGAACA TAGGAAAACA AGCTTGGTAG ATCTGACATG GGTCCCAGAA 
AAGGAAATCC TCCCAAGATC TACCCCAAAA CAAATACATC CCAGTTTGAA GAGAAGGGCC 
TATGGAGTGT CATGTCCTAC CACTGAGAAA GGGATCCAGA CATCCCTACC CCCTGAATGC 
CTGTCCCATA AACATGGACT GTATTCTAAA GCCGTCAAAG GTTATGTTAA ACGAAACCAT 
CAAAAAGCCA TTGGAAAGCC CCCTGGGAAC TTGCCCAGGG ACACCCTGAA GACTAAGGCT 
ATCAGGCCTG CATCTGAGCA TCTTCGGATG TTCCAGTACC ACAAGGTGCC ACAGACTAAA 
GAAAAAGCAA CAAATGTGGG AGAACAACAA GGAACCCACA TCAGATTCCC TCCATCCAAG 
AAACTGAAGC AGCTTCAGGG ACGTTTCCCA CCAAACACTG ATCATTATTG CAAGAGAAGG 
CCTCAACTCT CCCAGCCTGG CCAGCCCTCC ATCCTCAATT CCAAGAGCTA CAATTTAGGC 
AAAATCTTAG CGTCTGTGTT TGCAGGGATG ACCTTAATGA AGGACAGAGC AGACTGTACT 
ATGCAGTCTC AAGTCTCCCA GGCTCCACAG GCTTCCGTCC GCAACTCCAA AAGGTACAAA 
CATAGTAAAA GGATGGGGTC TGAGCCCAGA AGGGTGCCCT TAAAGAAAGA CACAGCAAGG 
TATGATATGG GAAAGCCCAT CAAGAAGGGA CGTGGTGCTG GGGCAAAAAA TGTGCCTCAC 
AGTTCATGGA GCATCACTGG GAAGGGGCTG AAAGCCAGGA ACCCTGCACT GAGGACAGAC 
GAGCTGTCCG ACATAAACCC TACTGACGAT CATTCTCTGC ATGACTTAGA GGCTAAAAGG 
AAGCTGGCAT CAAATAGCAC AAAACTTCCA GTCAAACACA GAAGGACACC ATATCTACAG 
ATCCTTGAGG CACTGGATCC CACCCCATAT AGGGTTCCAG CCTCAAAATG TTCCCGTGTT 
GTATTTCCCT CCTCACTCAT CTGGGATTCC AAGGAGGAAT ACTACTCCAA GGCTGCCGTG 
ATCCTGGAAA ATTTGCATCA CCAGGACCCA GGAGGGACAA GGGTAGAAAG TGCATCAGCT 
GCCAGTCTAG AGAGGGCTCT GTCTATGCAC TCAACTGCAG AGGTGCAGAA GACACAAAGA 
GCCCCTCCAC CTGCTGCCAG CCATAGACTC CCAAAAACAC ATCCAGATCT ACTGAAGAGA 
AACCTGAGTA TTCAGCGCTC TGCTTTGTAC TTTGAGGCAA AACCGCAGGA GGGCAGGATT 
ATCCGAGGGA TTGGAAAGGG CAGCCTACAA CAAAATAACA ACCCCCAAAA GGCCAAGCAT 
GCACCACTCA AGAGCTTTCA TGAGGGGGAC TCAAGACATC ACTTGTGGAA TGGGACAGTG 
GTGGGCCCTG GAGAAAGGGC TTCAGCAGCC AAACAGACTA AAGCAGGGGA GGTAAAAAAA 
GAGACACCTT ATGCATGGAG AGGGAGTCTG GGATCCAACG AGAGTCACAC TGGCAAGGAC 
ATCAATATCA GTCCCAGGGT CTTTGGCTCT TTAGGGGCCA AGAGAAGCCC AGGCCATCTC 
CAAACATGTA CTCCACAACA CTCGCAGGAC TCAACTCTAA GAACACAAGG GTACAGGAAT 
ATCAGTGTCA GTTCAAACAA GCAGCCACAG CCCAGGCCCG GGAGACACGA TCCAGAATGC 
CCCAGTACAG TACACCCTGC CAAGGTCAAC TTGTCTTCAG AGCACTCAAT GTCCAGCTTC 
CAGAATACGT GCCAAAAGCC AAAGACTGCC CAGGGCTCAT GTGATGTCTT CCTGAGGACG 
CATGAGAGGG CAGATACTGA AGAGAATAGA GTCCTGAAGG ATAAGATTAG AATAAATCAT 
CTCAAGGACT TGTGTCTCCA CAAAGAGAGG CAGGGTTCTA TAAGACCTAC AGCCATAAGC 
CAGGGAGAAA GGCTTGGGAG ATCAAGGCCT TGTAGCCTGA GCTCCACACA GCTCAAGGAT 
ACAGTAAAGA CTCGGACATC AGATAAAGGA GAGGCTACTT CTAAAAGCTC TTGGAAGAGC 
GACATAAGGG AGATTTTAAA ACATGGATAT GTTGGCTCCA AAGACATTGG ACAAGGGGAC 
ACTTCAAAGA AAGATCAGCC CCCAGCAGTG GCTGAGCGGA CAGAGGAAGA CTGGACAGGG 
AAAAAGGTCA TCTGCAGTAT GATAGCTCAC CTGCAATACC TTATGAACTT TCTGTTTGAG 
GTCATAGAGG ACACTGAACA GGACACATCA AAGGTACAAG GGTGTGAAAT AGAATCCCTG 
AAATTCCAGC TGGGTAGCTC ATCCCACTCT TCTGAGGGTG TCTATGGCAT AAATCAAGGT 
ACACCAGCAA GCACAGTGAG CAGGGGCCAC ACCAGCCCCG AGATGCATAA CTGTTCCTTC 
ACAAAAAGAG GGATTGGAGA CAAAACACAG TCAGGGATTA AAGCCAAGAC AGCCTGTGAC 
CAACATCTGA ACCAGGTGAA CAGAGGGATG TTCTCAGACC AGCTCCCTAT GCCCAAAAAA 
TATGACCTTT CACGTATGTA CAGGGGAATT CAACACCAGC AGGAGCTGGG TCTCACAGAC 
CAGACCTGTG ACCAACATAA AATTACAGAA AAGTTAGGAA TGACCCACTG TCCACATGGA 
GGCACCAAGG GGCACAACCA TTCCTTTGGA TATAGAAAAC TTGGAGACCA ACAACAGCCA 
GACTTTACCC ATAAGGCCTT GGACCCACAT CAAAGTGCAA AGGAAGACAT GGGCTGTGTC 
TCCTGTCTGA GTCCCAAAGG GAGCCGTCCA GTCAAGCACA GGAGAACTGA CTGCTTCTCA 
CCTTAA