Letmd1 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Letmd1
Entrez Gene ID	681352
Full Name	LETM1 domain containing 1
Synonyms	RGD1310591
General protein information	Preferred Names LETM1 domain containing 1 Names LETM1 domain-containing protein 1
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 7 Map Location: 7q36

mRNA and Protein(s)

mRNA	Protein	Name
XM_006242354.3	XP_006242416.1	LETM1 domain-containing protein 1 isoform X1
NM_001122781.3	NP_001116253.3	LETM1 domain-containing protein 1

Pathways from BioSystems

Homologies

Homo sapiens (human)	LETMD1	NP_056231.3
Bos taurus (cattle)	LETMD1	NP_001076899.1
Mus musculus (house mouse)	Letmd1	NP_598854.1
Danio rerio (zebrafish)	zgc:194455	NP_001124088.1
	LETMD1	XP_001086466.1
Rattus norvegicus (Norway rat)	Letmd1	NP_001116253.3
Pan troglodytes (chimpanzee)	LETMD1	XP_001152104.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP005736	XP_315750.3
Xenopus tropicalis (tropical clawed frog)	letmd1	NP_001016022.1
Canis lupus familiaris (dog)	LETMD1	XP_850285.1
Drosophila melanogaster (fruit fly)	CG5989	NP_001261593.1

Gene Ontology
Bibliography

Related articles in PubMed

Oncoprotein HCCR-1 expression in breast cancer is well correlated with known breast cancer prognostic factors including the HER2 overexpression, p53 mutation, and ER/PR status.
Ha SA, Lee YS, Shin SM, Kim HK, Kim S, Namkoong H, Kim HJ, Jung SM, Lee YS, Chung YJ, Jung SS, Kim JW
BMC cancer951(2009 Feb)

Gene and alternative splicing annotation with AIR.
Florea L, Di Francesco V, Miller J, Turner R, Yao A, Harris M, Walenz B, Mobarry C, Merkulov GV, Charlab R, Dew I, Deng Z, Istrail S, Li P, Sutton G
Genome research15(1)54-66(2005 Jan)

Identification and differential expression of novel human cervical cancer oncogene HCCR-2 in human cancers and its involvement in p53 stabilization.
Ko J, Lee YH, Hwang SY, Lee YS, Shin SM, Hwang JH, Kim J, Kim YW, Jang SW, Ryoo ZY, Kim IK, Namkoong SE, Kim JW
Oncogene22(30)4679-89(2003 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Letmd1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Letmd1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa01240	NM_001122781.3 Latest version!	Rattus norvegicus LETM1 domain containing 1 (Letmd1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$223.30 $319.00
ORa30748	XM_006242354.3 Latest version!	Rattus norvegicus LETM1 domain containing 1 (Letmd1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$223.30 $319.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Letmd1 ( NM_001122781.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001116253.3 Rattus norvegicus LETM1 domain containing 1 (Letmd1), mRNA.

Price & Availability↑

CloneID	ORa01240
Clone ID Related Accession (Same CDS sequence)	NM_001122781.3
Accession Version	NM_001122781.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1083bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-27
Organism	Rattus norvegicus(Norway rat)
Product	LETM1 domain-containing protein 1
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CB778986.1, BC159426.1, DN933141.1, CO573012.1 and BQ204198.1. On or before Sep 11, 2008 this sequence version replaced XM_001061371.1, XM_001064669.1, NM_001122781.2. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END##

ATGGCGCTGT CCAGGGTGTG CTGGTCTCGG GCTGCTCTGT GGGGTTCGAC CGTCGCCCCT 
GGACCCTTTG TCACCCGGAG GCTGCAGTTG GGCCGCTCTG GCCCTGCGTG GCGAGCCCCT 
CGGTCTTCAA AGCTTCACCT TTCTCCAAAG GCGGACGTGA AGAACTTGAT TTCTTACGTG 
GTGACCAAGA CGAGGGCGAT TAACGGAACG TACCACCGTT TCTTGGGGCG TCACTTCCCC 
CGCTTCTATG CCTTGTACAC AACCTTCATA AAAGGAATAC AGATGTTATG GGCTGATGCC 
AAAAAGGCTA GAAGAATAAA GGCAGACATG TGGAAACAAA ATCTAAAGTT TCATCAACTC 
TCTTACCGGG AGATGGAGCA TTTGAGACAG TTCCGACGAG ATATCACCAA GTGTCTCTTC 
ATAGGCCTCA TCTCCATTCC ACCCTTTGCC AACTACCTGG TCTTCTTGCT AATGTACCTG 
TTTCCTAGGC AACTGCTTGT CAAGCATTTC TGGACCCCCA AACAACAAAT TGACTTCTTG 
GACATTTATC ATGGTTTCCG GAGGCGGTCC CACTTGGAAA TCATCACGCA TCTCAGAAGG 
GCTAGCGCTT TGGTTTCTAA TGAGAAGCTC CGGTGGCATC TGGAGGACCT GTGTACCAAG 
GTGCAGAATG GCACCCACCC AACGGCACAG GACATCCTGG CTCTCAGAGA CTGCTTCTCT 
ACCTATCCCT TGGGCTTCAG CCAGCTCCAG GCTTCTCAAA TGAGAGCCTT GAGCCAGGCC 
ATGCTGCTCA CACCTTACCT GCCCCCGCCT TTGCTGAGGT GGCGTCTGAA GAGCCACACC 
GCTGTGATTC ACCAGCTGGA CCGGGCTCTG GCAAAGCTGG GGACTGGTCA CCTGACTCCG 
CAGGAAGTGA GATCGGCTTG CTATCTTCGT GGCTTGAACT CTACCCACAC CTCTGATGAC 
AGGTGTCGAA CTTGGCTGGG AGAATGGCTG CACATCTCCT GCAGCCTAAA AGAAGCTGAG 
CTGTCTCTCT TGCTGCACAA CGTGGTCCTG CTCTCCACCA ACTACCTTGA GACAAGGCGC 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001116253.3
CDS	31..1113
Translation	MALSRVCWSRAALWGSTVAPGPFVTRRLQLGRSGPAWRAPRSSKLHLSPKADVKNLISYVVTKTRAINGTYHRFLGRHFPRFYALYTTFIKGIQMLWADAKKARRIKADMWKQNLKFHQLSYREMEHLRQFRRDITKCLFIGLISIPPFANYLVFLLMYLFPRQLLVKHFWTPKQQIDFLDIYHGFRRRSHLEIITHLRRASALVSNEKLRWHLEDLCTKVQNGTHPTAQDILALRDCFSTYPLGFSQLQASQMRALSQAMLLTPYLPPPLLRWRLKSHTAVIHQLDRALAKLGTGHLTPQEVRSACYLRGLNSTHTSDDRCRTWLGEWLHISCSLKEAELSLLLHNVVLLSTNYLETRR

Target ORF information:

RefSeq Version	NM_001122781.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus LETM1 domain containing 1 (Letmd1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001122781.3

ORF Insert Sequence:

ATGGCGCTGT CCAGGGTGTG CTGGTCTCGG GCTGCTCTGT GGGGTTCGAC CGTCGCCCCT 
GGACCCTTTG TCACCCGGAG GCTGCAGTTG GGCCGCTCTG GCCCTGCGTG GCGAGCCCCT 
CGGTCTTCAA AGCTTCACCT TTCTCCAAAG GCGGACGTGA AGAACTTGAT TTCTTACGTG 
GTGACCAAGA CGAGGGCGAT TAACGGAACG TACCACCGTT TCTTGGGGCG TCACTTCCCC 
CGCTTCTATG CCTTGTACAC AACCTTCATA AAAGGAATAC AGATGTTATG GGCTGATGCC 
AAAAAGGCTA GAAGAATAAA GGCAGACATG TGGAAACAAA ATCTAAAGTT TCATCAACTC 
TCTTACCGGG AGATGGAGCA TTTGAGACAG TTCCGACGAG ATATCACCAA GTGTCTCTTC 
ATAGGCCTCA TCTCCATTCC ACCCTTTGCC AACTACCTGG TCTTCTTGCT AATGTACCTG 
TTTCCTAGGC AACTGCTTGT CAAGCATTTC TGGACCCCCA AACAACAAAT TGACTTCTTG 
GACATTTATC ATGGTTTCCG GAGGCGGTCC CACTTGGAAA TCATCACGCA TCTCAGAAGG 
GCTAGCGCTT TGGTTTCTAA TGAGAAGCTC CGGTGGCATC TGGAGGACCT GTGTACCAAG 
GTGCAGAATG GCACCCACCC AACGGCACAG GACATCCTGG CTCTCAGAGA CTGCTTCTCT 
ACCTATCCCT TGGGCTTCAG CCAGCTCCAG GCTTCTCAAA TGAGAGCCTT GAGCCAGGCC 
ATGCTGCTCA CACCTTACCT GCCCCCGCCT TTGCTGAGGT GGCGTCTGAA GAGCCACACC 
GCTGTGATTC ACCAGCTGGA CCGGGCTCTG GCAAAGCTGG GGACTGGTCA CCTGACTCCG 
CAGGAAGTGA GATCGGCTTG CTATCTTCGT GGCTTGAACT CTACCCACAC CTCTGATGAC 
AGGTGTCGAA CTTGGCTGGG AGAATGGCTG CACATCTCCT GCAGCCTAAA AGAAGCTGAG 
CTGTCTCTCT TGCTGCACAA CGTGGTCCTG CTCTCCACCA ACTACCTTGA GACAAGGCGC 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Letmd1 ( XM_006242354.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006242416.1 Rattus norvegicus LETM1 domain containing 1 (Letmd1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa30748
Clone ID Related Accession (Same CDS sequence)	XM_006242354.3
Accession Version	XM_006242354.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1116bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	LETM1 domain-containing protein 1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005106.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006242354.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGCTGT CCAGGGTGTG CTGGTCTCGG GCTGCTCTGT GGGGTTCGAC CGTCGCCCCT 
GGACCCTTTG TCACCCGGAG GCTGCAGTTG GGCCGCTCTG GCCCTGCGTG GCGAGCCCCT 
CGGTCTTCAA AGCTTCACCT TTCTCCAAAG GCGGACGTGA AGAACTTGAT TTCTTACGTG 
GTGACCAAGA CGAGGGCGAT TAACGGAACG TACCACCGTT TCTTGGGGCG TCACTTCCCC 
CGCTTCTATG CCTTGTACAC AACCTTCATA AAAGGAATAC AGATGTTATG GGCTGATGCC 
AAAAAGGCTA GAAGAATAAA GGCAGACATG TGGAAACAAA ATCTAAAGTT TCATCAACTC 
TCTTACCGGG AGATGGAGCA TTTGAGACAG TTCCGACGAG ATATCACCAA GTGTCTCTTC 
ATAGGCCTCA TCTCCATTCC ACCCTTTGCC AACTACCTGG TCTTCTTGCT AATGTACCTG 
TTTCCTAGGC AACTGCTTGT CAAGCATTTC TGGACCCCCA AACAACAAAT TGACTTCTTG 
GACATTTATC ATGGTTTCCG GAGGCGGTCC CACTTGGAAA TCATCACGCA TCTCAGAAGG 
GCTAGCGCTT TGGTTTCTAA TGAGAAGCTC CGGTGGCATC TGGAGGACCT GTGTACCAAG 
GTGCAGAATG GCACCCACCC AACGGCACAG GACATCCTGG CTCTCAGAGA CTGCTTCTCT 
ACCTATCCCT TGGGCTTCAG CCAGCTCCAG GCTTCTCAAA TGAGAGCCTT GAGCCAGGCC 
ATGCTGCTCA CACCTTACCT GCCCCCGCCT TTGCTGAGGT GGCGTCTGAA GAGCCACACC 
GCTGTGATTC ACCAGCTGGA CCGGGCTCTG GCAAAGCTGG GGACTGGTCA CCTGACTCCG 
CAGGAAGTGA GATCGGCTTG CTATCTTCGT GGCTTGAACT CTACCCACAC CTCTGATGAC 
AGGTGTCGAA CTTGGCTGGG AGAATGGCTG CACATCTCCT GCAGCCTAAA AGCCATCCCT 
GGAGCAGCCG CAAGGAAAGG ACATTCGATC CACCTGAGGG AGCAAAGGAG GTTGTGGCCA 
GATAAGAACG ACAGCTCTAA CAAGGGAGAC AGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006242416.1
CDS	132..1247
Translation	MALSRVCWSRAALWGSTVAPGPFVTRRLQLGRSGPAWRAPRSSKLHLSPKADVKNLISYVVTKTRAINGTYHRFLGRHFPRFYALYTTFIKGIQMLWADAKKARRIKADMWKQNLKFHQLSYREMEHLRQFRRDITKCLFIGLISIPPFANYLVFLLMYLFPRQLLVKHFWTPKQQIDFLDIYHGFRRRSHLEIITHLRRASALVSNEKLRWHLEDLCTKVQNGTHPTAQDILALRDCFSTYPLGFSQLQASQMRALSQAMLLTPYLPPPLLRWRLKSHTAVIHQLDRALAKLGTGHLTPQEVRSACYLRGLNSTHTSDDRCRTWLGEWLHISCSLKAIPGAAARKGHSIHLREQRRLWPDKNDSSNKGDR

Target ORF information:

RefSeq Version	XM_006242354.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus LETM1 domain containing 1 (Letmd1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006242354.3

ORF Insert Sequence:

ATGGCGCTGT CCAGGGTGTG CTGGTCTCGG GCTGCTCTGT GGGGTTCGAC CGTCGCCCCT 
GGACCCTTTG TCACCCGGAG GCTGCAGTTG GGCCGCTCTG GCCCTGCGTG GCGAGCCCCT 
CGGTCTTCAA AGCTTCACCT TTCTCCAAAG GCGGACGTGA AGAACTTGAT TTCTTACGTG 
GTGACCAAGA CGAGGGCGAT TAACGGAACG TACCACCGTT TCTTGGGGCG TCACTTCCCC 
CGCTTCTATG CCTTGTACAC AACCTTCATA AAAGGAATAC AGATGTTATG GGCTGATGCC 
AAAAAGGCTA GAAGAATAAA GGCAGACATG TGGAAACAAA ATCTAAAGTT TCATCAACTC 
TCTTACCGGG AGATGGAGCA TTTGAGACAG TTCCGACGAG ATATCACCAA GTGTCTCTTC 
ATAGGCCTCA TCTCCATTCC ACCCTTTGCC AACTACCTGG TCTTCTTGCT AATGTACCTG 
TTTCCTAGGC AACTGCTTGT CAAGCATTTC TGGACCCCCA AACAACAAAT TGACTTCTTG 
GACATTTATC ATGGTTTCCG GAGGCGGTCC CACTTGGAAA TCATCACGCA TCTCAGAAGG 
GCTAGCGCTT TGGTTTCTAA TGAGAAGCTC CGGTGGCATC TGGAGGACCT GTGTACCAAG 
GTGCAGAATG GCACCCACCC AACGGCACAG GACATCCTGG CTCTCAGAGA CTGCTTCTCT 
ACCTATCCCT TGGGCTTCAG CCAGCTCCAG GCTTCTCAAA TGAGAGCCTT GAGCCAGGCC 
ATGCTGCTCA CACCTTACCT GCCCCCGCCT TTGCTGAGGT GGCGTCTGAA GAGCCACACC 
GCTGTGATTC ACCAGCTGGA CCGGGCTCTG GCAAAGCTGG GGACTGGTCA CCTGACTCCG 
CAGGAAGTGA GATCGGCTTG CTATCTTCGT GGCTTGAACT CTACCCACAC CTCTGATGAC 
AGGTGTCGAA CTTGGCTGGG AGAATGGCTG CACATCTCCT GCAGCCTAAA AGCCATCCCT 
GGAGCAGCCG CAAGGAAAGG ACATTCGATC CACCTGAGGG AGCAAAGGAG GTTGTGGCCA 
GATAAGAACG ACAGCTCTAA CAAGGGAGAC AGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Oncoprotein HCCR-1 expression in breast cancer is well correlated with known breast cancer prognostic factors including the HER2 overexpression, p53 mutation, and ER/PR status.
BMC cancer951(2009 Feb)
Ha SA,Lee YS,Shin SM,Kim HK,Kim S,Namkoong H,Kim HJ,Jung SM,Lee YS,Chung YJ,Jung SS,Kim JW

Gene and alternative splicing annotation with AIR.
Genome research15(1)54-66(2005 Jan)
Florea L,Di Francesco V,Miller J,Turner R,Yao A,Harris M,Walenz B,Mobarry C,Merkulov GV,Charlab R,Dew I,Deng Z,Istrail S,Li P,Sutton G

Identification and differential expression of novel human cervical cancer oncogene HCCR-2 in human cancers and its involvement in p53 stabilization.
Oncogene22(30)4679-89(2003 Jul)
Ko J,Lee YH,Hwang SY,Lee YS,Shin SM,Hwang JH,Kim J,Kim YW,Jang SW,Ryoo ZY,Kim IK,Namkoong SE,Kim JW