Samd5 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Samd5
Entrez Gene ID	365038
Full Name	sterile alpha motif domain containing 5
Synonyms	RGD1311012
General protein information	Preferred Names sterile alpha motif domain containing 5 Names sterile alpha motif domain-containing protein 5
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 1 Map Location: 1p13

mRNA and Protein(s)

mRNA	Protein	Name
NM_001108901.1	NP_001102371.1	sterile alpha motif domain-containing protein 5

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	SAMD5	XP_001173087.1
Mus musculus (house mouse)	Samd5	NP_796245.2
Danio rerio (zebrafish)	LOC100148561	XP_005158658.1
Homo sapiens (human)	SAMD5	NP_001025231.1
	LOC701153	XP_001089460.2
Bos taurus (cattle)	SAMD5	NP_001162077.1
Rattus norvegicus (Norway rat)	Samd5	NP_001102371.1

Gene Ontology
Bibliography

Related articles in PubMed

Expression and localization of sterile alpha motif domain containing 5 is associated with cell type and malignancy of biliary tree.
Yagai T, Matsui S, Harada K, Inagaki FF, Saijou E, Miura Y, Nakanuma Y, Miyajima A, Tanaka M
PloS one12(4)e0175355(2017)

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.
Gaudet P, Livstone MS, Lewis SE, Thomas PD
Briefings in bioinformatics12(5)449-62(2011 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Samd5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Samd5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa08587	NM_001108901.1 Latest version!	Rattus norvegicus sterile alpha motif domain containing 5 (Samd5), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$69.30 $99.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Samd5 ( NM_001108901.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001102371.1 Rattus norvegicus sterile alpha motif domain containing 5 (Samd5), mRNA.

Price & Availability↑

CloneID	ORa08587
Clone ID Related Accession (Same CDS sequence)	NM_001108901.1
Accession Version	NM_001108901.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 522bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-18
Organism	Rattus norvegicus(Norway rat)
Product	sterile alpha motif domain-containing protein 5
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473994.1. On or before Oct 4, 2007 this sequence version replaced XM_344792.3, XM_001069146.1. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END##

ATGTGCACCA ACATAGTTTA CGAGTGGCTG AAAGCGTTAC AGCTCCCTCA GTACGCGGAG 
TCCTTCGTGG ATAATGGCTA CGATGACCTG GAAGTGTGCA AGCAGATCGG AGACCCGGAC 
CTGGACGCCA TCGGGGTGCT GGCTCCCGCG CACCGCCGCC GCATCCTGGA GGCTGTGCAC 
CGGCTGCGGG AACAGGACGC TGCCGCTGCC GGCCTCTACT TCACACTCGA ACCGCAGCCC 
GTGTCACCCG CACCGCTGGT GGACGCGGTG CCCCCAAGCC GCCGGGGGGA GCCATGTGGC 
GGCTCAGCCC AGGGCACTCG CGGGGACCCC CGTGGCCAGC CAAGCGCTCC CCGCAGCAGG 
GAGCTGGTGA GCTACCCTAA GCTGAAACTG AAGATCATGA TCCGGGATAA GCTGGTCCGC 
GATGGCATTC ACCTGAGCAA ACCCCCATAC TCGCGCAAGG TCCCCATGGC CGGCATCCTA 
GAGTACTTAA TGAATTGGCC GAAGTCATCA CAGAACCGCT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001102371.1
CDS	289..810
Translation	MCTNIVYEWLKALQLPQYAESFVDNGYDDLEVCKQIGDPDLDAIGVLAPAHRRRILEAVHRLREQDAAAAGLYFTLEPQPVSPAPLVDAVPPSRRGEPCGGSAQGTRGDPRGQPSAPRSRELVSYPKLKLKIMIRDKLVRDGIHLSKPPYSRKVPMAGILEYLMNWPKSSQNR

Target ORF information:

RefSeq Version	NM_001108901.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus sterile alpha motif domain containing 5 (Samd5), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001108901.1

ORF Insert Sequence:

ATGTGCACCA ACATAGTTTA CGAGTGGCTG AAAGCGTTAC AGCTCCCTCA GTACGCGGAG 
TCCTTCGTGG ATAATGGCTA CGATGACCTG GAAGTGTGCA AGCAGATCGG AGACCCGGAC 
CTGGACGCCA TCGGGGTGCT GGCTCCCGCG CACCGCCGCC GCATCCTGGA GGCTGTGCAC 
CGGCTGCGGG AACAGGACGC TGCCGCTGCC GGCCTCTACT TCACACTCGA ACCGCAGCCC 
GTGTCACCCG CACCGCTGGT GGACGCGGTG CCCCCAAGCC GCCGGGGGGA GCCATGTGGC 
GGCTCAGCCC AGGGCACTCG CGGGGACCCC CGTGGCCAGC CAAGCGCTCC CCGCAGCAGG 
GAGCTGGTGA GCTACCCTAA GCTGAAACTG AAGATCATGA TCCGGGATAA GCTGGTCCGC 
GATGGCATTC ACCTGAGCAA ACCCCCATAC TCGCGCAAGG TCCCCATGGC CGGCATCCTA 
GAGTACTTAA TGAATTGGCC GAAGTCATCA CAGAACCGCT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Expression and localization of sterile alpha motif domain containing 5 is associated with cell type and malignancy of biliary tree.
PloS one12(4)e0175355(2017)
Yagai T,Matsui S,Harada K,Inagaki FF,Saijou E,Miura Y,Nakanuma Y,Miyajima A,Tanaka M

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.
Briefings in bioinformatics12(5)449-62(2011 Sep)
Gaudet P,Livstone MS,Lewis SE,Thomas PD