The following Six5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Six5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | ORa14252 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001372077.1 , XM_003748780.4 , XM_003753221.4 | |
| Accession Version | NM_001372077.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2163bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector |  User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-08-06 | |
| Organism | Rattus norvegicus(Norway rat) | |
| Product | homeobox protein SIX5 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC120692.6. On or before Aug 7, 2019 this sequence version replaced XM_003748780.4, XM_003753221.4. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## inferred exon combination :: based on alignments, homology ##RefSeq-Attributes-END## | |
1 | ATGGCTACCT CGCCTGCCGA GCCGAGCGCG GGGCCGGCGG CTCAGGGGGA GGCGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001359006.1 |
| CDS | 26..2188 |
| Translation |
Target ORF information:
Target ORF information:
|
 NM_001372077.1 |
1 | ATGGCTACCT CGCCTGCCGA GCCGAGCGCG GGGCCGGCGG CTCAGGGGGA GGCGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | ORa14252 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001372077.1 , XM_003748780.4 , XM_003753221.4 | |
| Accession Version | XM_003748780.4 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2163bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-07-25 | |
| Organism | Rattus norvegicus(Norway rat) | |
| Product | homeobox protein SIX5 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_003748780.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCTACCT CGCCTGCCGA GCCGAGCGCG GGGCCGGCGG CTCAGGGGGA GGCGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_003748828.2 |
| CDS | 60..2222 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_003748780.4 |
1 | ATGGCTACCT CGCCTGCCGA GCCGAGCGCG GGGCCGGCGG CTCAGGGGGA GGCGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | ORa14252 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001372077.1 , XM_003748780.4 , XM_003753221.4 | |
| Accession Version | XM_003753221.4 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2163bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-07-25 | |
| Organism | Rattus norvegicus(Norway rat) | |
| Product | homeobox protein SIX5 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (AC_000069.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_003753221.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCTACCT CGCCTGCCGA GCCGAGCGCG GGGCCGGCGG CTCAGGGGGA GGCGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_003753269.1 |
| CDS | 60..2222 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_003753221.4 |
1 | ATGGCTACCT CGCCTGCCGA GCCGAGCGCG GGGCCGGCGG CTCAGGGGGA GGCGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Six family genes control the proliferation and differentiation of muscle satellite cells. |
Six5 is required for spermatogenic cell survival and spermiogenesis. |
Quantitative proteomic identification of six4 as the trex-binding factor in the muscle creatine kinase enhancer. |
Mice deficient in Six5 develop cataracts: implications for myotonic dystrophy. |
Heterozygous loss of Six5 in mice is sufficient to cause ocular cataracts. |
