LOC103690007 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC103690007
Entrez Gene ID	103690007
Full Name	5-methylcytosine rRNA methyltransferase NSUN4
General protein information	Preferred Names 5-methylcytosine rRNA methyltransferase NSUN4 Names 5-methylcytosine rRNA methyltransferase NSUN4
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 5 Map Location: 5q35

mRNA and Protein(s)

mRNA	Protein	Name
XM_008763980.2	XP_008762202.1	5-methylcytosine rRNA methyltransferase NSUN4 isoform X1
XM_017593796.1	XP_017449285.1	5-methylcytosine rRNA methyltransferase NSUN4 isoform X2

Pathways from BioSystems
Gene Ontology

The following LOC103690007 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC103690007 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa01973	XM_008763980.2 Latest version!	Rattus norvegicus 5-methylcytosine rRNA methyltransferase NSUN4 (LOC103690007), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$223.30 $319.00
ORa61159	XM_017593796.1 Latest version!	Rattus norvegicus 5-methylcytosine rRNA methyltransferase NSUN4 (LOC103690007), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC103690007 ( XM_008763980.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_008762202.1 Rattus norvegicus 5-methylcytosine rRNA methyltransferase NSUN4 (LOC103690007), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa01973
Clone ID Related Accession (Same CDS sequence)	XM_008763980.2
Accession Version	XM_008763980.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1146bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	5-methylcytosine rRNA methyltransferase NSUN4 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008763980.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCTGCGC CCGTATTAAG AGGTGTTCGA AAGCTGCTGA AGCTCGCGGA CTTCACGCCA 
GTCCCGCGGA GACATCGATA TAAGAAGAAA TGGGCTACCA CAGAACCACA ATTCACTCCC 
AGCCGGCTTG CTCTGCAGAA TTTTGACATG ACTTACAGTG TACAGTTTGG GGATCTTTGG 
CCATCAATCC GTGTTAGTCT TCTCTCAGAG CAGAAGTATG GTGCACTAGT CAATAATTTT 
GCTGCCTGGG ATAGTGTGAG TGCTAAGCTG GAGCAGCTGA GTGCCAAGGA CTTTGTCAGT 
GAAGCCATCT CTTACCAGAA ACTGGAGCCT GAGAGTGGCC TCTCTCCAAC TCTATCCCTG 
GACTGCAGCC CCAACCTTCG ATGCTTCACT TTTTCCAAAG GGGATGTCAG CCGCTTCCCT 
CCTGCCAGTG TTGGCAGCCT GGGTCTCATG GACTACTACC TGATGGATGC CGCCTCCTTG 
CTACCTGTGC TGGCTCTTGG TCTGCAGCAT GGAGACATTG TGCTTGACCT GTGTGCCGCT 
CCTGGGGGAA AAACACTGGC CCTACTTCAG ACGGGCTGTT GCCGTAACCT AGCTGCCAAC 
GATCTCTCTA CCTCCCGAAC AGGCAGACTA CAGAAGGTCC TTCACAGTTA TGTGCCTCAA 
GATATTAGGA AAGGGAACCA CATTCGAGTT ACCTCATGGG ATGGCAGGAA GTGGGGAGAG 
CTGGAGGGGG ACACCTATGA TAAGGTGTTA GTAGATGTGC CGTGTACCAC GGACCGCCAC 
TCCCTTCATG AGGACGAGAA CAACATCTTT CAGCGGTCAA GGAAGAAGGA GCGACAGATG 
TTGCCTATGC TGCAGGTGCA GCTTCTTGGG GCTGGACTCC TTGCCACCAA GCCCGGAGGT 
CACGTTGTCT ATTCCACTTG TTCACTGTCA CACTTACAGA ATGAGTATGT GGTGCAGGGT 
GCCATCGAGC TTCTGGCCAA TCAATACAAC ATCAAGGTTC AAGTGGAAGA CCTGTCTCAC 
TTCCGAAAGC TTTTCATGGA CACATTCTGT TTCCTCCCAT CCTGCCAGGT TGGGGAGCTG 
GTAATACCAA ACCTCATGGC CAATTTTGGA CCTATGTACT TCTGCAAATT GCACAGGGTG 
CCATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008762202.1
CDS	999..2144
Translation	MAAPVLRGVRKLLKLADFTPVPRRHRYKKKWATTEPQFTPSRLALQNFDMTYSVQFGDLWPSIRVSLLSEQKYGALVNNFAAWDSVSAKLEQLSAKDFVSEAISYQKLEPESGLSPTLSLDCSPNLRCFTFSKGDVSRFPPASVGSLGLMDYYLMDAASLLPVLALGLQHGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSTSRTGRLQKVLHSYVPQDIRKGNHIRVTSWDGRKWGELEGDTYDKVLVDVPCTTDRHSLHEDENNIFQRSRKKERQMLPMLQVQLLGAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYNIKVQVEDLSHFRKLFMDTFCFLPSCQVGELVIPNLMANFGPMYFCKLHRVP

Target ORF information:

RefSeq Version	XM_008763980.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus 5-methylcytosine rRNA methyltransferase NSUN4 (LOC103690007), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008763980.2

ORF Insert Sequence:

ATGGCTGCGC CCGTATTAAG AGGTGTTCGA AAGCTGCTGA AGCTCGCGGA CTTCACGCCA 
GTCCCGCGGA GACATCGATA TAAGAAGAAA TGGGCTACCA CAGAACCACA ATTCACTCCC 
AGCCGGCTTG CTCTGCAGAA TTTTGACATG ACTTACAGTG TACAGTTTGG GGATCTTTGG 
CCATCAATCC GTGTTAGTCT TCTCTCAGAG CAGAAGTATG GTGCACTAGT CAATAATTTT 
GCTGCCTGGG ATAGTGTGAG TGCTAAGCTG GAGCAGCTGA GTGCCAAGGA CTTTGTCAGT 
GAAGCCATCT CTTACCAGAA ACTGGAGCCT GAGAGTGGCC TCTCTCCAAC TCTATCCCTG 
GACTGCAGCC CCAACCTTCG ATGCTTCACT TTTTCCAAAG GGGATGTCAG CCGCTTCCCT 
CCTGCCAGTG TTGGCAGCCT GGGTCTCATG GACTACTACC TGATGGATGC CGCCTCCTTG 
CTACCTGTGC TGGCTCTTGG TCTGCAGCAT GGAGACATTG TGCTTGACCT GTGTGCCGCT 
CCTGGGGGAA AAACACTGGC CCTACTTCAG ACGGGCTGTT GCCGTAACCT AGCTGCCAAC 
GATCTCTCTA CCTCCCGAAC AGGCAGACTA CAGAAGGTCC TTCACAGTTA TGTGCCTCAA 
GATATTAGGA AAGGGAACCA CATTCGAGTT ACCTCATGGG ATGGCAGGAA GTGGGGAGAG 
CTGGAGGGGG ACACCTATGA TAAGGTGTTA GTAGATGTGC CGTGTACCAC GGACCGCCAC 
TCCCTTCATG AGGACGAGAA CAACATCTTT CAGCGGTCAA GGAAGAAGGA GCGACAGATG 
TTGCCTATGC TGCAGGTGCA GCTTCTTGGG GCTGGACTCC TTGCCACCAA GCCCGGAGGT 
CACGTTGTCT ATTCCACTTG TTCACTGTCA CACTTACAGA ATGAGTATGT GGTGCAGGGT 
GCCATCGAGC TTCTGGCCAA TCAATACAAC ATCAAGGTTC AAGTGGAAGA CCTGTCTCAC 
TTCCGAAAGC TTTTCATGGA CACATTCTGT TTCCTCCCAT CCTGCCAGGT TGGGGAGCTG 
GTAATACCAA ACCTCATGGC CAATTTTGGA CCTATGTACT TCTGCAAATT GCACAGGGTG 
CCATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC103690007 ( XM_017593796.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_017449285.1 Rattus norvegicus 5-methylcytosine rRNA methyltransferase NSUN4 (LOC103690007), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ORa61159
Clone ID Related Accession (Same CDS sequence)	XM_017593796.1
Accession Version	XM_017593796.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 999bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	5-methylcytosine rRNA methyltransferase NSUN4 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACTTACA GTGTACAGTT TGGGGATCTT TGGCCATCAA TCCGTGTTAG TCTTCTCTCA 
GAGCAGAAGT ATGGTGCACT AGTCAATAAT TTTGCTGCCT GGGATAGTGT GAGTGCTAAG 
CTGGAGCAGC TGAGTGCCAA GGACTTTGTC AGTGAAGCCA TCTCTTACCA GAAACTGGAG 
CCTGAGAGTG GCCTCTCTCC AACTCTATCC CTGGACTGCA GCCCCAACCT TCGATGCTTC 
ACTTTTTCCA AAGGGGATGT CAGCCGCTTC CCTCCTGCCA GTGTTGGCAG CCTGGGTCTC 
ATGGACTACT ACCTGATGGA TGCCGCCTCC TTGCTACCTG TGCTGGCTCT TGGTCTGCAG 
CATGGAGACA TTGTGCTTGA CCTGTGTGCC GCTCCTGGGG GAAAAACACT GGCCCTACTT 
CAGACGGGCT GTTGCCGTAA CCTAGCTGCC AACGATCTCT CTACCTCCCG AACAGGCAGA 
CTACAGAAGG TCCTTCACAG TTATGTGCCT CAAGATATTA GGAAAGGGAA CCACATTCGA 
GTTACCTCAT GGGATGGCAG GAAGTGGGGA GAGCTGGAGG GGGACACCTA TGATAAGGTG 
TTAGTAGATG TGCCGTGTAC CACGGACCGC CACTCCCTTC ATGAGGACGA GAACAACATC 
TTTCAGCGGT CAAGGAAGAA GGAGCGACAG ATGTTGCCTA TGCTGCAGGT GCAGCTTCTT 
GGGGCTGGAC TCCTTGCCAC CAAGCCCGGA GGTCACGTTG TCTATTCCAC TTGTTCACTG 
TCACACTTAC AGAATGAGTA TGTGGTGCAG GGTGCCATCG AGCTTCTGGC CAATCAATAC 
AACATCAAGG TTCAAGTGGA AGACCTGTCT CACTTCCGAA AGCTTTTCAT GGACACATTC 
TGTTTCCTCC CATCCTGCCA GGTTGGGGAG CTGGTAATAC CAAACCTCAT GGCCAATTTT 
GGACCTATGT ACTTCTGCAA ATTGCACAGG GTGCCATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017449285.1
CDS	162..1160
Translation	MTYSVQFGDLWPSIRVSLLSEQKYGALVNNFAAWDSVSAKLEQLSAKDFVSEAISYQKLEPESGLSPTLSLDCSPNLRCFTFSKGDVSRFPPASVGSLGLMDYYLMDAASLLPVLALGLQHGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSTSRTGRLQKVLHSYVPQDIRKGNHIRVTSWDGRKWGELEGDTYDKVLVDVPCTTDRHSLHEDENNIFQRSRKKERQMLPMLQVQLLGAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYNIKVQVEDLSHFRKLFMDTFCFLPSCQVGELVIPNLMANFGPMYFCKLHRVP

Target ORF information:

RefSeq Version	XM_017593796.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus 5-methylcytosine rRNA methyltransferase NSUN4 (LOC103690007), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017593796.1

ORF Insert Sequence:

ATGACTTACA GTGTACAGTT TGGGGATCTT TGGCCATCAA TCCGTGTTAG TCTTCTCTCA 
GAGCAGAAGT ATGGTGCACT AGTCAATAAT TTTGCTGCCT GGGATAGTGT GAGTGCTAAG 
CTGGAGCAGC TGAGTGCCAA GGACTTTGTC AGTGAAGCCA TCTCTTACCA GAAACTGGAG 
CCTGAGAGTG GCCTCTCTCC AACTCTATCC CTGGACTGCA GCCCCAACCT TCGATGCTTC 
ACTTTTTCCA AAGGGGATGT CAGCCGCTTC CCTCCTGCCA GTGTTGGCAG CCTGGGTCTC 
ATGGACTACT ACCTGATGGA TGCCGCCTCC TTGCTACCTG TGCTGGCTCT TGGTCTGCAG 
CATGGAGACA TTGTGCTTGA CCTGTGTGCC GCTCCTGGGG GAAAAACACT GGCCCTACTT 
CAGACGGGCT GTTGCCGTAA CCTAGCTGCC AACGATCTCT CTACCTCCCG AACAGGCAGA 
CTACAGAAGG TCCTTCACAG TTATGTGCCT CAAGATATTA GGAAAGGGAA CCACATTCGA 
GTTACCTCAT GGGATGGCAG GAAGTGGGGA GAGCTGGAGG GGGACACCTA TGATAAGGTG 
TTAGTAGATG TGCCGTGTAC CACGGACCGC CACTCCCTTC ATGAGGACGA GAACAACATC 
TTTCAGCGGT CAAGGAAGAA GGAGCGACAG ATGTTGCCTA TGCTGCAGGT GCAGCTTCTT 
GGGGCTGGAC TCCTTGCCAC CAAGCCCGGA GGTCACGTTG TCTATTCCAC TTGTTCACTG 
TCACACTTAC AGAATGAGTA TGTGGTGCAG GGTGCCATCG AGCTTCTGGC CAATCAATAC 
AACATCAAGG TTCAAGTGGA AGACCTGTCT CACTTCCGAA AGCTTTTCAT GGACACATTC 
TGTTTCCTCC CATCCTGCCA GGTTGGGGAG CTGGTAATAC CAAACCTCAT GGCCAATTTT 
GGACCTATGT ACTTCTGCAA ATTGCACAGG GTGCCATAG