LOC102553088 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC102553088
Entrez Gene ID	102553088
Full Name	collagen alpha-1(XXV) chain-like
General protein information	Preferred Names collagen alpha-1(XXV) chain-like Names collagen alpha-1(XXV) chain-like
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 2 Map Location: 2q42

mRNA and Protein(s)

mRNA	Protein	Name
XM_006233282.3	XP_006233344.1	collagen alpha-1(XXV) chain-like

Pathways from BioSystems
Gene Ontology

The following LOC102553088 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC102553088 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa25244	XM_006233282.3 Latest version!	Rattus norvegicus collagen alpha-1(XXV) chain-like (LOC102553088), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$69.30 $99.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC102553088 ( XM_006233282.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006233344.1 Rattus norvegicus collagen alpha-1(XXV) chain-like (LOC102553088), mRNA.

Price & Availability↑

CloneID	ORa25244
Clone ID Related Accession (Same CDS sequence)	XM_006233282.3
Accession Version	XM_006233282.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 387bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	collagen alpha-1(XXV) chain-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005101.4) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006233282.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTTGGTGA AGAAGCTTGC AGGGAAGGGA GGGGGACGAG AGTCTGGATC TGAAGATCCG 
CGCCCCTTGG GACAGCGTTG TGCCGGCACC ATGCCCTCGT GCGCGGCCCT GGCGACCCTC 
CTGTCAGTGG TTGCTGTGGT TTTCTGTTTG TATCTTGGGG TGAAAACCAA CGACCTCCAG 
GCGAGGATTG CTGCTCTTGA ATCTGCTAAA GGGACCCCTT CCTTCCATCC GCTGCCTGAC 
ACCATGGATG AGCTGAAGGC AATGGTTCAG GAGAAAGTGG AGCGGCTCTT GGCTCAGAAA 
TCCTATGAAC ATATGGCTAA AATAAGAATC GCCAGGGAGG CACCTTCAGA GTGCAACTGC 
CCAGCAGGTA AAATGGACCT CATTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006233344.1
CDS	1118..1504
Translation	MLVKKLAGKGGGRESGSEDPRPLGQRCAGTMPSCAALATLLSVVAVVFCLYLGVKTNDLQARIAALESAKGTPSFHPLPDTMDELKAMVQEKVERLLAQKSYEHMAKIRIAREAPSECNCPAGKMDLI

Target ORF information:

RefSeq Version	XM_006233282.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus collagen alpha-1(XXV) chain-like (LOC102553088), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006233282.3

ORF Insert Sequence:

ATGTTGGTGA AGAAGCTTGC AGGGAAGGGA GGGGGACGAG AGTCTGGATC TGAAGATCCG 
CGCCCCTTGG GACAGCGTTG TGCCGGCACC ATGCCCTCGT GCGCGGCCCT GGCGACCCTC 
CTGTCAGTGG TTGCTGTGGT TTTCTGTTTG TATCTTGGGG TGAAAACCAA CGACCTCCAG 
GCGAGGATTG CTGCTCTTGA ATCTGCTAAA GGGACCCCTT CCTTCCATCC GCTGCCTGAC 
ACCATGGATG AGCTGAAGGC AATGGTTCAG GAGAAAGTGG AGCGGCTCTT GGCTCAGAAA 
TCCTATGAAC ATATGGCTAA AATAAGAATC GCCAGGGAGG CACCTTCAGA GTGCAACTGC 
CCAGCAGGTA AAATGGACCT CATTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.