LOC18108577 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18108577 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18108577 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa37747 XM_006371519.1
Latest version!
Populus trichocarpa hypothetical protein (POPTR_0019s13360g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
OPa448721 XM_024591316.1
Latest version!
Populus trichocarpa NDR1/HIN1-like protein 6 (LOC18108577), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa448721 XM_024591317.1
Latest version!
Populus trichocarpa NDR1/HIN1-like protein 6 (LOC18108577), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa448722 XM_024591318.1
Latest version!
Populus trichocarpa NDR1/HIN1-like protein 6 (LOC18108577), transcript variant X3, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
OPa448723 XM_024591319.1
Latest version!
Populus trichocarpa NDR1/HIN1-like protein 6 (LOC18108577), transcript variant X4, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OPa37747
    Clone ID Related Accession (Same CDS sequence) XM_006371519.1
    Accession Version XM_006371519.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 678bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008485). COMPLETENESS: incomplete on the 3' end.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGCTCAACA ATAGTAATTC TTCAAGCGTA AGGCCTCCTC CTCAAAGGCG TAACATTCCT 
    AGGTACCATT CAAACCATCA TCATTCTCAT GGACATTGTT GTTTAAAATG TGTATGCTGT
    TGCTTTTGCT TCTCGATTGT TGTGATTATC GTTCTTGCTA GCCTTCTTTC CGTTCTTTAC
    GTAACACTAG ACCCCAAAAT GCCTCAATAT AATATCGAAA GTTTTGAGGT CAATGCTTTC
    AACATGGCTC CGGATTTTAG CCTCTATACC GAATTTGTTG TCGTCGTGAA AGCTAACAAT
    CCTAATAAAG AGATTGCTTT CACCTATGGC AAGGACAGCT CGGTCGTTGT AGCCTATTCA
    GATTCAACTC TTTGTTCTGG CAAGCTTCCT GCCTTTCACC AACCGTTCGA GAACACAACG
    ATGATCCGTG TTGTTTTGAC AGGAAAAAGC GAGTTCGGTT CAGGACTTCA AGAAGCTCTA
    ATGGACAACA GGGAAACAGG AAGGATCCCT TTACTTGTAA TCGTAAAGGC ACCTATTTCT
    GTGATGGTTA AAAGTCTTGC ATTGAGACAG GTTATGGTTA ATGTCAACTG TTCTTTGGTT
    GTTGACAACT TGGCACCCAA CAAAAGGGTT CGGATTCTAT CAAGTACATA TACCTATGCC
    TTCGAAGCAG TATTGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006371581.1
    CDS19..696
    Translation

    Target ORF information:

    RefSeq Version XM_006371519.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0019s13360g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_006371519.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGCTCAACA ATAGTAATTC TTCAAGCGTA AGGCCTCCTC CTCAAAGGCG TAACATTCCT 
    AGGTACCATT CAAACCATCA TCATTCTCAT GGACATTGTT GTTTAAAATG TGTATGCTGT
    TGCTTTTGCT TCTCGATTGT TGTGATTATC GTTCTTGCTA GCCTTCTTTC CGTTCTTTAC
    GTAACACTAG ACCCCAAAAT GCCTCAATAT AATATCGAAA GTTTTGAGGT CAATGCTTTC
    AACATGGCTC CGGATTTTAG CCTCTATACC GAATTTGTTG TCGTCGTGAA AGCTAACAAT
    CCTAATAAAG AGATTGCTTT CACCTATGGC AAGGACAGCT CGGTCGTTGT AGCCTATTCA
    GATTCAACTC TTTGTTCTGG CAAGCTTCCT GCCTTTCACC AACCGTTCGA GAACACAACG
    ATGATCCGTG TTGTTTTGAC AGGAAAAAGC GAGTTCGGTT CAGGACTTCA AGAAGCTCTA
    ATGGACAACA GGGAAACAGG AAGGATCCCT TTACTTGTAA TCGTAAAGGC ACCTATTTCT
    GTGATGGTTA AAAGTCTTGC ATTGAGACAG GTTATGGTTA ATGTCAACTG TTCTTTGGTT
    GTTGACAACT TGGCACCCAA CAAAAGGGTT CGGATTCTAT CAAGTACATA TACCTATGCC
    TTCGAAGCAG TATTGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa448721
    Clone ID Related Accession (Same CDS sequence) XM_024591316.1 , XM_024591317.1
    Accession Version XM_024591316.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 771bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product NDR1/HIN1-like protein 6 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037303.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGGACTATG CTCAGCGCAG GGTGCATCCA TCTGATGTTG AGGCAGCAAT GGAAACTGCC 
    CCTGCATACC CATCAAAATA TGTTATGCTC AACAATAGTA ATTCTTCAAG CGTAAGGCCT
    CCTCCTCAAA GGCGTAACAT TCCTAGGTAC CATTCAAACC ATCATCATTC TCATGGACAT
    TGTTGTTTAA AATGTGTATG CTGTTGCTTT TGCTTCTCGA TTGTTGTGAT TATCGTTCTT
    GCTAGCCTTC TTTCCGTTCT TTACGTAACA CTAGACCCCA AAATGCCTCA ATATAATATC
    GAAAGTTTTG AGGTCAATGC TTTCAACATG GCTCCGGATT TTAGCCTCTA TACCGAATTT
    GTTGTCGTCG TGAAAGCTAA CAATCCTAAT AAAGAGATTG CTTTCACCTA TGGCAAGGAC
    AGCTCGGTCG TTGTAGCCTA TTCAGATTCA ACTCTTTGTT CTGGCAAGCT TCCTGCCTTT
    CACCAACCGT TCGAGAACAC AACGATGATC CGTGTTGTTT TGACAGGAAA AAGCGAGTTC
    GGTTCAGGAC TTCAAGAAGC TCTAATGGAC AACAGGGAAA CAGGAAGGAT CCCTTTACTT
    GTAATCGTAA AGGCACCTAT TTCTGTGATG GTTAAAAGTC TTGCATTGAG ACAGGTTATG
    GTTAATGTCA ACTGTTCTTT GGTTGTTGAC AACTTGGCAC CCAACAAAAG GGTTCGGATT
    CTATCAAGTA CATATACCTA TGCCTTCGAA GGTATTACGC TCAAAATATG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024447084.1
    CDS1230..2000
    Translation

    Target ORF information:

    RefSeq Version XM_024591316.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa NDR1/HIN1-like protein 6 (LOC18108577), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_024591316.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGGACTATG CTCAGCGCAG GGTGCATCCA TCTGATGTTG AGGCAGCAAT GGAAACTGCC 
    CCTGCATACC CATCAAAATA TGTTATGCTC AACAATAGTA ATTCTTCAAG CGTAAGGCCT
    CCTCCTCAAA GGCGTAACAT TCCTAGGTAC CATTCAAACC ATCATCATTC TCATGGACAT
    TGTTGTTTAA AATGTGTATG CTGTTGCTTT TGCTTCTCGA TTGTTGTGAT TATCGTTCTT
    GCTAGCCTTC TTTCCGTTCT TTACGTAACA CTAGACCCCA AAATGCCTCA ATATAATATC
    GAAAGTTTTG AGGTCAATGC TTTCAACATG GCTCCGGATT TTAGCCTCTA TACCGAATTT
    GTTGTCGTCG TGAAAGCTAA CAATCCTAAT AAAGAGATTG CTTTCACCTA TGGCAAGGAC
    AGCTCGGTCG TTGTAGCCTA TTCAGATTCA ACTCTTTGTT CTGGCAAGCT TCCTGCCTTT
    CACCAACCGT TCGAGAACAC AACGATGATC CGTGTTGTTT TGACAGGAAA AAGCGAGTTC
    GGTTCAGGAC TTCAAGAAGC TCTAATGGAC AACAGGGAAA CAGGAAGGAT CCCTTTACTT
    GTAATCGTAA AGGCACCTAT TTCTGTGATG GTTAAAAGTC TTGCATTGAG ACAGGTTATG
    GTTAATGTCA ACTGTTCTTT GGTTGTTGAC AACTTGGCAC CCAACAAAAG GGTTCGGATT
    CTATCAAGTA CATATACCTA TGCCTTCGAA GGTATTACGC TCAAAATATG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa448721
    Clone ID Related Accession (Same CDS sequence) XM_024591316.1 , XM_024591317.1
    Accession Version XM_024591317.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 771bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product NDR1/HIN1-like protein 6 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037303.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGGACTATG CTCAGCGCAG GGTGCATCCA TCTGATGTTG AGGCAGCAAT GGAAACTGCC 
    CCTGCATACC CATCAAAATA TGTTATGCTC AACAATAGTA ATTCTTCAAG CGTAAGGCCT
    CCTCCTCAAA GGCGTAACAT TCCTAGGTAC CATTCAAACC ATCATCATTC TCATGGACAT
    TGTTGTTTAA AATGTGTATG CTGTTGCTTT TGCTTCTCGA TTGTTGTGAT TATCGTTCTT
    GCTAGCCTTC TTTCCGTTCT TTACGTAACA CTAGACCCCA AAATGCCTCA ATATAATATC
    GAAAGTTTTG AGGTCAATGC TTTCAACATG GCTCCGGATT TTAGCCTCTA TACCGAATTT
    GTTGTCGTCG TGAAAGCTAA CAATCCTAAT AAAGAGATTG CTTTCACCTA TGGCAAGGAC
    AGCTCGGTCG TTGTAGCCTA TTCAGATTCA ACTCTTTGTT CTGGCAAGCT TCCTGCCTTT
    CACCAACCGT TCGAGAACAC AACGATGATC CGTGTTGTTT TGACAGGAAA AAGCGAGTTC
    GGTTCAGGAC TTCAAGAAGC TCTAATGGAC AACAGGGAAA CAGGAAGGAT CCCTTTACTT
    GTAATCGTAA AGGCACCTAT TTCTGTGATG GTTAAAAGTC TTGCATTGAG ACAGGTTATG
    GTTAATGTCA ACTGTTCTTT GGTTGTTGAC AACTTGGCAC CCAACAAAAG GGTTCGGATT
    CTATCAAGTA CATATACCTA TGCCTTCGAA GGTATTACGC TCAAAATATG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024447085.1
    CDS1123..1893
    Translation

    Target ORF information:

    RefSeq Version XM_024591317.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa NDR1/HIN1-like protein 6 (LOC18108577), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_024591317.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGGACTATG CTCAGCGCAG GGTGCATCCA TCTGATGTTG AGGCAGCAAT GGAAACTGCC 
    CCTGCATACC CATCAAAATA TGTTATGCTC AACAATAGTA ATTCTTCAAG CGTAAGGCCT
    CCTCCTCAAA GGCGTAACAT TCCTAGGTAC CATTCAAACC ATCATCATTC TCATGGACAT
    TGTTGTTTAA AATGTGTATG CTGTTGCTTT TGCTTCTCGA TTGTTGTGAT TATCGTTCTT
    GCTAGCCTTC TTTCCGTTCT TTACGTAACA CTAGACCCCA AAATGCCTCA ATATAATATC
    GAAAGTTTTG AGGTCAATGC TTTCAACATG GCTCCGGATT TTAGCCTCTA TACCGAATTT
    GTTGTCGTCG TGAAAGCTAA CAATCCTAAT AAAGAGATTG CTTTCACCTA TGGCAAGGAC
    AGCTCGGTCG TTGTAGCCTA TTCAGATTCA ACTCTTTGTT CTGGCAAGCT TCCTGCCTTT
    CACCAACCGT TCGAGAACAC AACGATGATC CGTGTTGTTT TGACAGGAAA AAGCGAGTTC
    GGTTCAGGAC TTCAAGAAGC TCTAATGGAC AACAGGGAAA CAGGAAGGAT CCCTTTACTT
    GTAATCGTAA AGGCACCTAT TTCTGTGATG GTTAAAAGTC TTGCATTGAG ACAGGTTATG
    GTTAATGTCA ACTGTTCTTT GGTTGTTGAC AACTTGGCAC CCAACAAAAG GGTTCGGATT
    CTATCAAGTA CATATACCTA TGCCTTCGAA GGTATTACGC TCAAAATATG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa448722
    Clone ID Related Accession (Same CDS sequence) XM_024591318.1
    Accession Version XM_024591318.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 495bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product NDR1/HIN1-like protein 6 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037303.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGGACTATG CTCAGCGCAG GGTGCATCCA TCTGATGTTG AGGCAGCAAT GGAAACTGCC 
    CCTGCATACC CATCAAAATA TGTTATGCTC AACAATAGTA ATTCTTCAAG CGTAAGGCCT
    CCTCCTCAAA GGCGTAACAT TCCTAGCTCG GTCGTTGTAG CCTATTCAGA TTCAACTCTT
    TGTTCTGGCA AGCTTCCTGC CTTTCACCAA CCGTTCGAGA ACACAACGAT GATCCGTGTT
    GTTTTGACAG GAAAAAGCGA GTTCGGTTCA GGACTTCAAG AAGCTCTAAT GGACAACAGG
    GAAACAGGAA GGATCCCTTT ACTTGTAATC GTAAAGGCAC CTATTTCTGT GATGGTTAAA
    AGTCTTGCAT TGAGACAGGT TATGGTTAAT GTCAACTGTT CTTTGGTTGT TGACAACTTG
    GCACCCAACA AAAGGGTTCG GATTCTATCA AGTACATATA CCTATGCCTT CGAAGGTATT
    ACGCTCAAAA TATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024447086.1
    CDS1252..1746
    Translation

    Target ORF information:

    RefSeq Version XM_024591318.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa NDR1/HIN1-like protein 6 (LOC18108577), transcript variant X3, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_024591318.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGGACTATG CTCAGCGCAG GGTGCATCCA TCTGATGTTG AGGCAGCAAT GGAAACTGCC 
    CCTGCATACC CATCAAAATA TGTTATGCTC AACAATAGTA ATTCTTCAAG CGTAAGGCCT
    CCTCCTCAAA GGCGTAACAT TCCTAGCTCG GTCGTTGTAG CCTATTCAGA TTCAACTCTT
    TGTTCTGGCA AGCTTCCTGC CTTTCACCAA CCGTTCGAGA ACACAACGAT GATCCGTGTT
    GTTTTGACAG GAAAAAGCGA GTTCGGTTCA GGACTTCAAG AAGCTCTAAT GGACAACAGG
    GAAACAGGAA GGATCCCTTT ACTTGTAATC GTAAAGGCAC CTATTTCTGT GATGGTTAAA
    AGTCTTGCAT TGAGACAGGT TATGGTTAAT GTCAACTGTT CTTTGGTTGT TGACAACTTG
    GCACCCAACA AAAGGGTTCG GATTCTATCA AGTACATATA CCTATGCCTT CGAAGGTATT
    ACGCTCAAAA TATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa448723
    Clone ID Related Accession (Same CDS sequence) XM_024591319.1
    Accession Version XM_024591319.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 270bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product uncharacterized protein LOC18108577 isoform X3
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037303.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    ATGAACACCA CCACCACCCT TGTCCATGAC ACCATAACAA AAACTTTTAG CAGTGGATTA 
    AAGGGTTATC AGCCATTGGA TCGTTATGAT GCTCTGCATG GAGATGATCC TCATGACATG
    GGGTATAGAA GTGCAAGGGC TAAGAAAAGA CAGGTTTTTC TGAAGTCTTA CAGGTTAGCA
    TCAAGAACCG AATTGAGAAG AAGAAGGTCA AGATCGTTGA AGCTGAAGAA GGTGGTGGTT
    AAGGTCAAGT GTGCAAAATT CCTGGAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024447087.1
    CDS399..668
    Translation

    Target ORF information:

    RefSeq Version XM_024591319.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa NDR1/HIN1-like protein 6 (LOC18108577), transcript variant X4, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_024591319.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    ATGAACACCA CCACCACCCT TGTCCATGAC ACCATAACAA AAACTTTTAG CAGTGGATTA 
    AAGGGTTATC AGCCATTGGA TCGTTATGAT GCTCTGCATG GAGATGATCC TCATGACATG
    GGGTATAGAA GTGCAAGGGC TAAGAAAAGA CAGGTTTTTC TGAAGTCTTA CAGGTTAGCA
    TCAAGAACCG AATTGAGAAG AAGAAGGTCA AGATCGTTGA AGCTGAAGAA GGTGGTGGTT
    AAGGTCAAGT GTGCAAAATT CCTGGAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D