ORF » Species Summary » Phaeodactylum tricornutum CCAP 1055/1 » PHATRDRAFT_54342 cDNA ORF clone

PHATRDRAFT_54342 cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1

The following PHATRDRAFT_54342 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PHATRDRAFT_54342 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPb08724 XM_002179343.2
Latest version!		 Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    PHATRDRAFT_54342 ( XM_002179343.2 ) cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1 -> XP_002179379.1 Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OPb08724
    Clone ID Related Accession (Same CDS sequence) XM_002179343.2
    Accession Version XM_002179343.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1758bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-15
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_011674). On Jun 16, 2017 this sequence version replaced XM_002179343.1. COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGTCGAATA GCGACCATGG TGGCAAACAG CGGATCCTTG CACCAGCGGT CCAAGCGCAT 
    TCCTTATCAA GGCCAGCTGT CGTTCTCTTT GGAACTCATG ACATCCGAAT TCACGATAAC 
    GAGGCCTTGC TGTTGGCCTG CCATCACAAC CACGTATTGC CGGTTTTTCT ATGGCAAGTA 
    CCGGTCCACC ATTGGGGAGC TCGTGGCGCC CTGCAAGTCG TGTTGAAAGA AGCATTGCAC 
    CAGCTTTCAC TACAGCTTTC ACAAGAAAGT ATCAATCTAC CTCTGGTGTG CGGCAATACG 
    GCGGACAGTG TTTCGGAGCT CTGTAAAATT GCTTCTGAGA TTGGCGCGAG TGCAGTCTAT 
    TGGAATCGCG AGATGACACC TGAAAGCAGG GAAATGGAGA GGCACAGAGC CACAAGTTTG 
    AAGCAACTCG ATATCGCAGC TGTAGCATGT CAATCGGCCC TACTCTACGA TGTCGAGAAA 
    CTTGAACTTG ACGAGGGGTT TCATGGTGGT CACTGGGGCA CGCTGATGCC GTTTAAGAGG 
    GCTTGCGAAA AGCAACTTGG AAAACCGGAT CGACCGATTT TGATGAAAGA GTCGCTGGCT 
    TGCCTATACT CCGTCGCTCC GCCTCCGCAA GACTGTAAAT CCGTACCCAT CGAGGAACTC 
    GGCTTCGAGA CCGTGCCGCC TTCCACAAAG TGGGATGAGC CCATTCGAGA GCGATTCCCA 
    ATGATACATT ACTTGGCTCA GCGGAGACTG GACCACTTTC TTATAAAAGG GCTACCTCTG 
    TATGAAAGTG ACCGAAGTCG GGCAGACATG GAATACGCGA CTTCGCAGCT TTCAGTGTAC 
    CTTCGTATTG GTATCATATC ACCACGAGAG CTATACTGGA GGATTGAGGA CAGCTCACTG 
    AGCCCTGAGG CGAAGAAAAC GTTTGCCCGT CGACTAATCT GGCGTGAGCT GGCGTACTAT 
    CAACTATTCT GTTTTCCAAA GATGAGGGAC AGATCGATAC GCAAGCACTA TGAAGCATCG 
    GAATGGGTCA CGGGTGACGA AGAGAAAGGC AGATTCAATG CATGGAAGAG AGGGTTGACT 
    GGCTATCCGT TGGTGGATGC TGGGATGCGT GAACTCTATA CAACTGGTTA CTTGACCCAA 
    TCCGTGCGGA TGGTTGTCGC GTCATTTCTT GTCGAGTATC TTCGAGTCGA CTGGACCAAA 
    GGAGCAGAAT GGTTCCACTA CACTTTGGCC GACGCCGATA GCGCGATCAA TTCGATGATG 
    TGGCAGAACG CTGGGCGGAG CGGCATCGAC CAGTGGAATT TTGTTTTGAG TCCTGAGAAT 
    GCATCCCAAG ACCCATACGG AGAATATACT CGCAAATGGG TCCCCGAGCT TTCTCCGTTG 
    CCATTGCAAT ACTTACAGCG ACCTTGGCAG ACGTTTGAAG GTGATCTTCG TATGGCCGGT 
    ATCGTCCTTG GTGAAACATA CCCACATAGA ATTGTTCAGG ACCTCAAGGG TGAACGACAA 
    AAAAGTGTCG AGAGCGTTCT TGCAATGAGA AGGCGATCGC AAGAAAAAAA TGATGAAAAT 
    GGATACGACT TGATCGACCT TCCTTCGGGC ATCGAAACGG TCGTTTTTAC GAAGAAAGAG 
    TACCGTATTG ATCGGTTGGG CAAAGTGCTC CAGGGAAAAC CAAAGACCGC TACTTCAACA 
    GTCAAGCGCC GAAAAACAAA ACGTACAACG AAAACAGATG GGAGAAGAAA GAACCGGCTG 
    CCATCAAGTC TCGCATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002179379.1
    CDS1..1758
    Translation

    Target ORF information:

    RefSeq Version XM_002179343.2
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Definition Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002179343.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGTCGAATA GCGACCATGG TGGCAAACAG CGGATCCTTG CACCAGCGGT CCAAGCGCAT 
    TCCTTATCAA GGCCAGCTGT CGTTCTCTTT GGAACTCATG ACATCCGAAT TCACGATAAC 
    GAGGCCTTGC TGTTGGCCTG CCATCACAAC CACGTATTGC CGGTTTTTCT ATGGCAAGTA 
    CCGGTCCACC ATTGGGGAGC TCGTGGCGCC CTGCAAGTCG TGTTGAAAGA AGCATTGCAC 
    CAGCTTTCAC TACAGCTTTC ACAAGAAAGT ATCAATCTAC CTCTGGTGTG CGGCAATACG 
    GCGGACAGTG TTTCGGAGCT CTGTAAAATT GCTTCTGAGA TTGGCGCGAG TGCAGTCTAT 
    TGGAATCGCG AGATGACACC TGAAAGCAGG GAAATGGAGA GGCACAGAGC CACAAGTTTG 
    AAGCAACTCG ATATCGCAGC TGTAGCATGT CAATCGGCCC TACTCTACGA TGTCGAGAAA 
    CTTGAACTTG ACGAGGGGTT TCATGGTGGT CACTGGGGCA CGCTGATGCC GTTTAAGAGG 
    GCTTGCGAAA AGCAACTTGG AAAACCGGAT CGACCGATTT TGATGAAAGA GTCGCTGGCT 
    TGCCTATACT CCGTCGCTCC GCCTCCGCAA GACTGTAAAT CCGTACCCAT CGAGGAACTC 
    GGCTTCGAGA CCGTGCCGCC TTCCACAAAG TGGGATGAGC CCATTCGAGA GCGATTCCCA 
    ATGATACATT ACTTGGCTCA GCGGAGACTG GACCACTTTC TTATAAAAGG GCTACCTCTG 
    TATGAAAGTG ACCGAAGTCG GGCAGACATG GAATACGCGA CTTCGCAGCT TTCAGTGTAC 
    CTTCGTATTG GTATCATATC ACCACGAGAG CTATACTGGA GGATTGAGGA CAGCTCACTG 
    AGCCCTGAGG CGAAGAAAAC GTTTGCCCGT CGACTAATCT GGCGTGAGCT GGCGTACTAT 
    CAACTATTCT GTTTTCCAAA GATGAGGGAC AGATCGATAC GCAAGCACTA TGAAGCATCG 
    GAATGGGTCA CGGGTGACGA AGAGAAAGGC AGATTCAATG CATGGAAGAG AGGGTTGACT 
    GGCTATCCGT TGGTGGATGC TGGGATGCGT GAACTCTATA CAACTGGTTA CTTGACCCAA 
    TCCGTGCGGA TGGTTGTCGC GTCATTTCTT GTCGAGTATC TTCGAGTCGA CTGGACCAAA 
    GGAGCAGAAT GGTTCCACTA CACTTTGGCC GACGCCGATA GCGCGATCAA TTCGATGATG 
    TGGCAGAACG CTGGGCGGAG CGGCATCGAC CAGTGGAATT TTGTTTTGAG TCCTGAGAAT 
    GCATCCCAAG ACCCATACGG AGAATATACT CGCAAATGGG TCCCCGAGCT TTCTCCGTTG 
    CCATTGCAAT ACTTACAGCG ACCTTGGCAG ACGTTTGAAG GTGATCTTCG TATGGCCGGT 
    ATCGTCCTTG GTGAAACATA CCCACATAGA ATTGTTCAGG ACCTCAAGGG TGAACGACAA 
    AAAAGTGTCG AGAGCGTTCT TGCAATGAGA AGGCGATCGC AAGAAAAAAA TGATGAAAAT 
    GGATACGACT TGATCGACCT TCCTTCGGGC ATCGAAACGG TCGTTTTTAC GAAGAAAGAG 
    TACCGTATTG ATCGGTTGGG CAAAGTGCTC CAGGGAAAAC CAAAGACCGC TACTTCAACA 
    GTCAAGCGCC GAAAAACAAA ACGTACAACG AAAACAGATG GGAGAAGAAA GAACCGGCTG 
    CCATCAAGTC TCGCATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kr?ger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-J?z?quel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


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