ORF » Species Summary » Phaeodactylum tricornutum CCAP 1055/1 » PHATRDRAFT_18197 cDNA ORF clone

PHATRDRAFT_18197 cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1

The following PHATRDRAFT_18197 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PHATRDRAFT_18197 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

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OPb06424 XM_002177641.1
Latest version!		 Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 20 $713.30
$1019.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    PHATRDRAFT_18197 ( XM_002177641.1 ) cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1 -> XP_002177677.1 Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OPb06424
    Clone ID Related Accession (Same CDS sequence) XM_002177641.1
    Accession Version XM_002177641.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3507bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-15
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_011670). COMPLETENESS: incomplete on the 3' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    ATGATAATGT TTTTACGTAA CCCTGACTCT CCACTTTCAT ATGGCTTAGG CTTGACGACG 
    CTCGTCACAT TGTCACAGCT CACAATGAGC CTGTGCCTCC GACATTATTT TTTCAAGTGC 
    TACACTACGG GTTTGCGTGT GCGCACAGCC GTTGTCGTGG CCATCTATCA TAAAGCTTTG 
    AAGCTGTCAG CAAGTGAACG GCAAACGCGC TCGTCGGGTG AAATTACGAA CCTCATGTCG 
    ATTGATGCCC AGAGACTACA AGACTTGACA ACGTACTTGC ACGCAATTTG GTATAGTCCC 
    TTGCAAATCA GTCTAGCGCT TTTGTTTCTT TGGAAACAGC TTGGCGCTAG TTCTTTAGGA 
    GGTGTGCTAG TCATTGTGAC AATGATTCCA GTGACGAAAA TTGTGGCTCA GTGGATGGGA 
    TCTATGCAAA AGTTGTTGAT GCGAGCTAAG GATCAGCGAG TAGACTTGAA CGGAGAGGTT 
    TTGGCCAGCA TGAAAGTCGT CAAGTTTCAG GCCTGGGAAG AGCCCTTCCA ATCTCGGATC 
    CTTGCCCTTC GTGAGGTGGA ACTTCATCAA CTTCTTCGCT ACTACATTGT GTTGTCGCTT 
    TCTCGAATGC TGTGGACGTT CACGCCGTTG ATGGTGGCGC TGGCGACATT CTCCGCCTAT 
    GTATGGTCTG GCCATGTTCT TGACGTGGCG TCGGCGTTGA CATCACTAGC TCTTTTTGAA 
    ATTTTGAGGT TTCCTCTATT TATGCTTCCT CAAATCATTA GCAATATTGT GGAGGCTACG 
    GTGGCATTGA AACGCATTCA ATCATTCTTG CTTTGTAAAG ATCATAAACC AGTTGAAGCT 
    GGTAATCTCG ACAACATCGG CATCAGAATG GAAGGAGTTT CAGCGGCGTA TGATTCGAAG 
    CGTCCGAAGC GAATTGAATT TGAATGCAAA CCAGGCGAAC TTGTAGCTGT CATCGGTAGT 
    GTTGGCTGTG GAAAATCGTC GTTTATAAAC GCACTTTTGG GCGAGGTCAG GGCATTGACT 
    GGATCTACTT CCGTTTGTGG AAAGATGGCG TATTTCTCGC AAGTGCCTTT CATTATGAAT 
    GCCAGCGTGC GGGACAATAT TCTCTTCAGT CATACAGACG AAGAAGTAGA TGAAGCGATG 
    TACCAGAGGT GTTTGAGATG CTGCGCCCTG AAGCACGATT TGGATCTTCT CCCTAATGGC 
    GACCGCACCG AAATTGGAGA GAAGGGAATT ACATTGTCTG GAGGTCAAAA GGCGCGAGTA 
    GCACTAGCTC GTGTAGTATA TCATCGGGCT GACCTTTCTT TGATTGATGA TGCTCTGGCA 
    GCTGTTGACG CTCATGTTGC AAAGCAGCTT TTCGAAGAGG CCATCGTGAA CGAACTCCTG 
    TCTTGTGGCG CTGCTGGTAT GGAGAGCCGC AGCGTTATCA TGGTCACAAA TGCTCTGCAA 
    TATTTATCGC ATCCCCGAGT AGACAGAATT ATTGTTTTAC AGGACGGACA CATTGTAGAA 
    AGTGGGACTT ACAATGAATT GAAGAACGGA GACTCCGTTT TCGCTGGATT CCTTGCAGTA 
    CTACGTGACA CTGGTACAGA TCTGAGTGGA CATCTTGTAG AGGGTGTTGC TAGCAGCGAT 
    AGCAACGGCG TTTCTGATGA ATCGGGTAAT TTAGTATGCA CCGGACGAGA AGCGGATATT 
    GAAGCGGAAC TCCCGGTGAA ACTAATGACC GACGAGTCTC GGCAATCGGG ACACGTGAAG 
    CCGAGTGTCT ATCTCTCTTG GATCAAAGCA GCTGGTGGGT TGTTTGCCCC TGTCGCAATT 
    CTCTTGGCGT TCGGCTTTGC AGAGGGGATT TCTGTCCTTT CGAATTGGTG GATTACCTAC 
    TGGTCCGGAC ACGGTAGCTT ATCAAGCCAA TCCCGATTTC TTGCCATCTA TGCCCTCATC 
    AACGGGACGG CTGCTCTGTT CGGCCTTTTT AGGACTCTGC TTGTCGTCAT TTTTGGTCTA 
    AAAGTCTCCC GAAAGCTTTT TGCCAACCTA CTGTCGGTAA TTCTGCACGC TCCCATGTCA 
    TTTTTTGATA CGACGCCTGT TGGGCGTCTT GTGAATCGAT TTAGCAAAGA TATGTATACA 
    ATAGATGAGC AGCTAATGGG CACCCTCCGA ACATATCTCC AGACACTGTT TGGCGTGTTC 
    AGCACACTGT TGGTGATATC ATCTGTGACT CCATTGTTTC TGTTGTGCTT GGTGCCCATG 
    CTCATATTCT ATTTGAAAGA GCAATCTTTT TTCACTATTT CTTACAGAGA GCTGAAAAGA 
    CTGGACTCGG TGAGCCGGAG TCCAATTTAC GCGTTGCTTG GCGAAAGCGT AGATGGCGTT 
    GCTGTGATAC GGGCCTTTGC TGCCCAAAAA AGTCTTCTCT GTCGCCTAAC CGATATGTTG 
    GATATTCAGC AACATGCGTA CTTTCTTACT TGCGCAGCGC AGTCCTGGCT CGCTGTTCGT 
    CTTGAGCTGA TTGGAACACT AATTGTAACA TTTGCGGCTT TGAGTGCAGT ATTGGAGCAC 
    ACCAGATCCG GAGCCGACGG AACCTTTGCG GGTTTGGCAG GGCTGTCGAT CTCGTATGCG 
    CTATCGGTTA CGCAATCGCT GAACTGGAGC GTTCGAATGG CAAGTGATAT GGAGGCGAAT 
    ATGGTGGCTG TTGAACGAGT TGAAGAGTAC TCCAACATTC AGTCCGAAGG CCTGAGATCA 
    ACTCCTGTTG ACGCAAAACT CCCTCAAGTG TGGCCTCCGA AAGGGGCGAT TGAGTTCACA 
    GAAGTCAGGC TACGATATAG ACCGGGTTTG CCTTTTGTTC TAAAGGGCTT AAATTTGACT 
    ATTCCTCCCG GGAGCAAAAT AGGAGTTGTT GGTCGTACAG GGGCGGGGAA ATCGACGCTA 
    ATGATAGCTC TGATGCGCAT TGTTGATGTA ACGGAAGGAA CCATAAAGAT TGATGGTACA 
    GATATATCGG AGATTGGATT GGCGAGGCTC AGACGAACTC TGGCTGTTAT TCCTCAGGAC 
    CCTGTCCTTT TTAGCGGATC CGTCAGATCA AATCTTGATC CGTTCCATGA ATACGAAGAC 
    GATGCTTTGT TAGATATTCT AGACCGCGTT GGGCTGTACG CACGGTCTAG GACCTCTTCA 
    ACTCAGAGTC TCCCATCCCT TGGCCAAATC TGTATTCGAA CCCTTACGGA TGTCATAGCT 
    GAAGGGGGCA TTAACTTTTC TGTCGGCCAG CGTCAGTTGC TGGTAATAGC TCGTGCACTT 
    TTGCGAGGGG CGAAGATTGT TATAATGGAC GAGGCAACTG CAGCAGTTGA TGCTGGAACG 
    GACGCTGCAA TCCAGAAAGT AATTCGGACT GAATTCACAG AGGCGACATG CATCACGGTG 
    GCCCATAGAA TCAACACTAT TTTGGATAGC GATTACATCC TGGTTATGTC GGACGGAAAG 
    GCGGAAGAAT TCGACAAACC TGATATGCTA CTAAAAAAAG GAGGATTGTT TCGTGATTTA 
    GTAAGAGCTT CTGCTGATAA TACCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002177677.1
    CDS292..3798
    Translation

    Target ORF information:

    RefSeq Version XM_002177641.1
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Definition Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002177641.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    ATGATAATGT TTTTACGTAA CCCTGACTCT CCACTTTCAT ATGGCTTAGG CTTGACGACG 
    CTCGTCACAT TGTCACAGCT CACAATGAGC CTGTGCCTCC GACATTATTT TTTCAAGTGC 
    TACACTACGG GTTTGCGTGT GCGCACAGCC GTTGTCGTGG CCATCTATCA TAAAGCTTTG 
    AAGCTGTCAG CAAGTGAACG GCAAACGCGC TCGTCGGGTG AAATTACGAA CCTCATGTCG 
    ATTGATGCCC AGAGACTACA AGACTTGACA ACGTACTTGC ACGCAATTTG GTATAGTCCC 
    TTGCAAATCA GTCTAGCGCT TTTGTTTCTT TGGAAACAGC TTGGCGCTAG TTCTTTAGGA 
    GGTGTGCTAG TCATTGTGAC AATGATTCCA GTGACGAAAA TTGTGGCTCA GTGGATGGGA 
    TCTATGCAAA AGTTGTTGAT GCGAGCTAAG GATCAGCGAG TAGACTTGAA CGGAGAGGTT 
    TTGGCCAGCA TGAAAGTCGT CAAGTTTCAG GCCTGGGAAG AGCCCTTCCA ATCTCGGATC 
    CTTGCCCTTC GTGAGGTGGA ACTTCATCAA CTTCTTCGCT ACTACATTGT GTTGTCGCTT 
    TCTCGAATGC TGTGGACGTT CACGCCGTTG ATGGTGGCGC TGGCGACATT CTCCGCCTAT 
    GTATGGTCTG GCCATGTTCT TGACGTGGCG TCGGCGTTGA CATCACTAGC TCTTTTTGAA 
    ATTTTGAGGT TTCCTCTATT TATGCTTCCT CAAATCATTA GCAATATTGT GGAGGCTACG 
    GTGGCATTGA AACGCATTCA ATCATTCTTG CTTTGTAAAG ATCATAAACC AGTTGAAGCT 
    GGTAATCTCG ACAACATCGG CATCAGAATG GAAGGAGTTT CAGCGGCGTA TGATTCGAAG 
    CGTCCGAAGC GAATTGAATT TGAATGCAAA CCAGGCGAAC TTGTAGCTGT CATCGGTAGT 
    GTTGGCTGTG GAAAATCGTC GTTTATAAAC GCACTTTTGG GCGAGGTCAG GGCATTGACT 
    GGATCTACTT CCGTTTGTGG AAAGATGGCG TATTTCTCGC AAGTGCCTTT CATTATGAAT 
    GCCAGCGTGC GGGACAATAT TCTCTTCAGT CATACAGACG AAGAAGTAGA TGAAGCGATG 
    TACCAGAGGT GTTTGAGATG CTGCGCCCTG AAGCACGATT TGGATCTTCT CCCTAATGGC 
    GACCGCACCG AAATTGGAGA GAAGGGAATT ACATTGTCTG GAGGTCAAAA GGCGCGAGTA 
    GCACTAGCTC GTGTAGTATA TCATCGGGCT GACCTTTCTT TGATTGATGA TGCTCTGGCA 
    GCTGTTGACG CTCATGTTGC AAAGCAGCTT TTCGAAGAGG CCATCGTGAA CGAACTCCTG 
    TCTTGTGGCG CTGCTGGTAT GGAGAGCCGC AGCGTTATCA TGGTCACAAA TGCTCTGCAA 
    TATTTATCGC ATCCCCGAGT AGACAGAATT ATTGTTTTAC AGGACGGACA CATTGTAGAA 
    AGTGGGACTT ACAATGAATT GAAGAACGGA GACTCCGTTT TCGCTGGATT CCTTGCAGTA 
    CTACGTGACA CTGGTACAGA TCTGAGTGGA CATCTTGTAG AGGGTGTTGC TAGCAGCGAT 
    AGCAACGGCG TTTCTGATGA ATCGGGTAAT TTAGTATGCA CCGGACGAGA AGCGGATATT 
    GAAGCGGAAC TCCCGGTGAA ACTAATGACC GACGAGTCTC GGCAATCGGG ACACGTGAAG 
    CCGAGTGTCT ATCTCTCTTG GATCAAAGCA GCTGGTGGGT TGTTTGCCCC TGTCGCAATT 
    CTCTTGGCGT TCGGCTTTGC AGAGGGGATT TCTGTCCTTT CGAATTGGTG GATTACCTAC 
    TGGTCCGGAC ACGGTAGCTT ATCAAGCCAA TCCCGATTTC TTGCCATCTA TGCCCTCATC 
    AACGGGACGG CTGCTCTGTT CGGCCTTTTT AGGACTCTGC TTGTCGTCAT TTTTGGTCTA 
    AAAGTCTCCC GAAAGCTTTT TGCCAACCTA CTGTCGGTAA TTCTGCACGC TCCCATGTCA 
    TTTTTTGATA CGACGCCTGT TGGGCGTCTT GTGAATCGAT TTAGCAAAGA TATGTATACA 
    ATAGATGAGC AGCTAATGGG CACCCTCCGA ACATATCTCC AGACACTGTT TGGCGTGTTC 
    AGCACACTGT TGGTGATATC ATCTGTGACT CCATTGTTTC TGTTGTGCTT GGTGCCCATG 
    CTCATATTCT ATTTGAAAGA GCAATCTTTT TTCACTATTT CTTACAGAGA GCTGAAAAGA 
    CTGGACTCGG TGAGCCGGAG TCCAATTTAC GCGTTGCTTG GCGAAAGCGT AGATGGCGTT 
    GCTGTGATAC GGGCCTTTGC TGCCCAAAAA AGTCTTCTCT GTCGCCTAAC CGATATGTTG 
    GATATTCAGC AACATGCGTA CTTTCTTACT TGCGCAGCGC AGTCCTGGCT CGCTGTTCGT 
    CTTGAGCTGA TTGGAACACT AATTGTAACA TTTGCGGCTT TGAGTGCAGT ATTGGAGCAC 
    ACCAGATCCG GAGCCGACGG AACCTTTGCG GGTTTGGCAG GGCTGTCGAT CTCGTATGCG 
    CTATCGGTTA CGCAATCGCT GAACTGGAGC GTTCGAATGG CAAGTGATAT GGAGGCGAAT 
    ATGGTGGCTG TTGAACGAGT TGAAGAGTAC TCCAACATTC AGTCCGAAGG CCTGAGATCA 
    ACTCCTGTTG ACGCAAAACT CCCTCAAGTG TGGCCTCCGA AAGGGGCGAT TGAGTTCACA 
    GAAGTCAGGC TACGATATAG ACCGGGTTTG CCTTTTGTTC TAAAGGGCTT AAATTTGACT 
    ATTCCTCCCG GGAGCAAAAT AGGAGTTGTT GGTCGTACAG GGGCGGGGAA ATCGACGCTA 
    ATGATAGCTC TGATGCGCAT TGTTGATGTA ACGGAAGGAA CCATAAAGAT TGATGGTACA 
    GATATATCGG AGATTGGATT GGCGAGGCTC AGACGAACTC TGGCTGTTAT TCCTCAGGAC 
    CCTGTCCTTT TTAGCGGATC CGTCAGATCA AATCTTGATC CGTTCCATGA ATACGAAGAC 
    GATGCTTTGT TAGATATTCT AGACCGCGTT GGGCTGTACG CACGGTCTAG GACCTCTTCA 
    ACTCAGAGTC TCCCATCCCT TGGCCAAATC TGTATTCGAA CCCTTACGGA TGTCATAGCT 
    GAAGGGGGCA TTAACTTTTC TGTCGGCCAG CGTCAGTTGC TGGTAATAGC TCGTGCACTT 
    TTGCGAGGGG CGAAGATTGT TATAATGGAC GAGGCAACTG CAGCAGTTGA TGCTGGAACG 
    GACGCTGCAA TCCAGAAAGT AATTCGGACT GAATTCACAG AGGCGACATG CATCACGGTG 
    GCCCATAGAA TCAACACTAT TTTGGATAGC GATTACATCC TGGTTATGTC GGACGGAAAG 
    GCGGAAGAAT TCGACAAACC TGATATGCTA CTAAAAAAAG GAGGATTGTT TCGTGATTTA 
    GTAAGAGCTT CTGCTGATAA TACCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kr?ger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-J?z?quel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


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