SIX5 cDNA ORF clone, Pan troglodytes(chimpanzee)

Gene
Clones
gRNAs

Summary

Gene Symbol	SIX5
Entrez Gene ID	456138
Full Name	SIX homeobox 5
General protein information	Preferred Names SIX homeobox 5 Names homeobox protein SIX5 sine oculis homeobox homolog 5
Gene Type	protein-coding
Organism	Pan troglodytes(chimpanzee)

mRNA and Protein(s)

mRNA	Protein	Name
XM_009435924.2	XP_009434199.2	homeobox protein SIX5

Pathways from BioSystems

Homologies

Homo sapiens (human)	SIX5	NP_787071.2
Mus musculus (house mouse)	Six5	NP_035513.1
Rattus norvegicus (Norway rat)	Six5	XP_003748828.1
Pan troglodytes (chimpanzee)	SIX5	XP_512758.2
Bos taurus (cattle)	SIX5	NP_001192695.1
	SIX5	XP_001111437.1
Canis lupus familiaris (dog)	SIX5	XP_005616928.1

Gene Ontology

The following SIX5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SIX5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPc75876	XM_009435924.2 Latest version!	Pan troglodytes SIX homeobox 5 (SIX5), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$426.30 $609.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

SIX5 ( XM_009435924.2 ) cDNA ORF clone, Pan troglodytes(chimpanzee) -> XP_009434199.2 Pan troglodytes SIX homeobox 5 (SIX5), mRNA.

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CloneID	OPc75876
Clone ID Related Accession (Same CDS sequence)	XM_009435924.2
Accession Version	XM_009435924.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2217bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-03-19
Organism	Pan troglodytes(chimpanzee)
Product	homeobox protein SIX5
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036898.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 2, 2016 this sequence version replaced XM_009435924.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCTACCT TGCCTGCGGA GCCGAGCGCG GGGCCGGCGG CTGGGGGGGA GGCGGTGGCG 
GCGGCGGCGA CCGAAGAGGA GGAGGAGGAA GCGCGCCAGC TCTTACAGAC TTTGCAGGCG 
GCCGAGGGTG AGGCGGCGGC GGCGGCCGGG GCCGGGGCGG GCGCAGCGGC TGCGGGAGCT 
GAGGGCCCGG GATCCCCGGG CGTCCCCGGG TCGCCCCCCG AGGCCGCTTC CGAACCGCCC 
ACGGGCCTCC GCTTCTCGCC CGAGCAGGTG GCGTGCGTCT GCGAGGCGCT GCTCCAGGCG 
GGCCACGCCG GCCGCTTGAG CCGCTTCCTG GGCGCACTGC CCCCGGCCGA GCGCCTACGT 
GGCAGCGACC CGGTGTTGCG CGCGCGGGCC CTGGTGGCCT TCCAGCGGGG CGAGTACGCC 
GAGCTCTACC GGCTACTCGA GAGCCGCCCC TTCCCCGCCG CCCACCACGC CTTCCTGCAG 
GACCTGTACC TGCGCGCGCG CTACCATGAG GCCGAGCGGG CCCGCGGCCG TGCGCTGGGC 
GCAGTGGACA AGTATCGACT CCGCAAGAAG TTCCCGCTGC CCAAGACCAT CTGGGACGGC 
GAGGAGACAG TCTACTGCTT CAAGGAGCGC TCCCGCGCAG CGCTCAAGGC CTGCTACCGC 
GGCAACCGCT ACCCCACGCC GGACGAGAAG CGCCGCCTGG CCACACTCAC CGGCCTGTCG 
CTCACGCAGG TCAGCAACTG GTTCAAGAAC CGGCGACAGC GCGACCGGAC CGGGGCCGGA 
GGCGGCGCGC CCTGCAAGAG CGAGTCTGAT GGGAATCCCA CGACTGAGGA CGAGTCCAGC 
CGAAGTCCTG AGGACCTGGA GAGAGGGGCG GCCCCAGTGT CCGCCGAGGC CGCTGCCCAG 
GGCTCCATGT TCCTGGCAGG GACCGGCCCT CCCGCGCCTT GCCCGGCTTC CTCCTCCATC 
CTGGTGAATG GGAGCTTCCT GGCAGCCAGC GGCTCCCCAG CAGTGCTCCT CAACGGGGGC 
CCCGTCATCA TCAACGGCCT GGCCCTGGGC GAGGCCTCCA GCCTGGGCCC GCTGCTGCTC 
ACTGGGGGCG GGGGTGCCCC TCCACCGCAG CCCAGCCCTC AGGGGGCCAG CGAGGCCAAG 
ACCTCTCTGG TCCTGGACCC TCAGACAGGG GAGGTGCGGC TGGAGGAGGC TCAGTCGGAG 
GCCCCTGAGA CCAAAGGGGC CCAGGTGGCT GCTCCGGGAC CAGCCCTTGG AGAGGAGGTC 
CTGGGGCCCC TGGCCCAAGT GGTGCCTGGC CCCCCGACGG CTGCCACCTT TCCTCTGCCC 
CCGGGGCCAG TGCCTGCTGT GGCTGCCCCA CAAGTGGTAC CGCTCTCCCC ACCCCCGGGG 
TATCCCACGG GCCTGAGCCC CACCTCCCCA CTATTGAACC TGCCCCAGGT AGTACCCACC 
TCACAGGTGG TGACCCTGCC CCAGGCTGTG GGGCCCCTGC AGCTGTTGGC AGCCGGGCCA 
GGCAGCCCTG TGAAGGTGGC AGCTGCAGCA GGCCCTGCCA ACGTGCACCT CATCAACTCC 
GGGGTGGGCG TGACTGCCCT GCAGCTGCCT TCGGCCACTG CCCCAGGAAA CTTCCTCCTG 
GCCAACCCTG TGTCTGGCAG CCCCATCGTG ACGGGTGTGG CCGTGCAGCA GGGCAAGATC 
ATCCTCACCG CCACCTTCCC CACCAGCATG CTCGTCTCCC AGGTCCTGCC GCCAGCCCCC 
GGCCTGGCCC TGCCACTGAA GCCAGAGACG GCCATCTCCG TGCCTGAGGG AGGCCTCCCG 
GTGGCCCCCA GCCCTGCTCT CCCAGAGGCT CACGCCCTAG GCACCCTTTC TGCGCAGCAG 
CCACCCCCCG CCGCTGCCAC CACCTCCAGC ACCAGCCTGC CCTTCTCCCC TGACTCCCCT 
GGCCTCCTGC CCAACTTCCC GGCGCCCCCA CCAGAGGGGC TGATGTTGTC ACCCGCGGCC 
GTGCCTGTCT GGTCAGCAGG GCTGGAACTA AGCGCAGGAA CAGAGGGGCT GCTGGAAGCG 
GAAAAGGGGC TGGGGACACA GGCCCCCCAC ACCGTGCTGA GGCTGCCAGA CCCCGACCCT 
GAGGGGCTGC TCCTGGGGGC CACCGCAGGG GGTGAGGTTG ACGAGGGGTT GGAAGCTGAG 
GCCAAGGTTC TGACCCAGCT CCAGTCGGTG CCTGTGGAGG AGCCCTTGGA ACTGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009434199.2
CDS	727..2943
Translation	MATLPAEPSAGPAAGGEAVAAAATEEEEEEARQLLQTLQAAEGEAAAAAGAGAGAAAAGAEGPGSPGVPGSPPEAASEPPTGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRTGAGGGAPCKSESDGNPTTEDESSRSPEDLERGAAPVSAEAAAQGSMFLAGTGPPAPCPASSSILVNGSFLAASGSPAVLLNGGPVIINGLALGEASSLGPLLLTGGGGAPPPQPSPQGASEAKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLAQVVPGPPTAATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALPLKPETAISVPEGGLPVAPSPALPEAHALGTLSAQQPPPAAATTSSTSLPFSPDSPGLLPNFPAPPPEGLMLSPAAVPVWSAGLELSAGTEGLLEAEKGLGTQAPHTVLRLPDPDPEGLLLGATAGGEVDEGLEAEAKVLTQLQSVPVEEPLEL

Target ORF information:

RefSeq Version	XM_009435924.2
Organism	Pan troglodytes(chimpanzee)
Definition	Pan troglodytes SIX homeobox 5 (SIX5), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009435924.2

ORF Insert Sequence:

ATGGCTACCT TGCCTGCGGA GCCGAGCGCG GGGCCGGCGG CTGGGGGGGA GGCGGTGGCG 
GCGGCGGCGA CCGAAGAGGA GGAGGAGGAA GCGCGCCAGC TCTTACAGAC TTTGCAGGCG 
GCCGAGGGTG AGGCGGCGGC GGCGGCCGGG GCCGGGGCGG GCGCAGCGGC TGCGGGAGCT 
GAGGGCCCGG GATCCCCGGG CGTCCCCGGG TCGCCCCCCG AGGCCGCTTC CGAACCGCCC 
ACGGGCCTCC GCTTCTCGCC CGAGCAGGTG GCGTGCGTCT GCGAGGCGCT GCTCCAGGCG 
GGCCACGCCG GCCGCTTGAG CCGCTTCCTG GGCGCACTGC CCCCGGCCGA GCGCCTACGT 
GGCAGCGACC CGGTGTTGCG CGCGCGGGCC CTGGTGGCCT TCCAGCGGGG CGAGTACGCC 
GAGCTCTACC GGCTACTCGA GAGCCGCCCC TTCCCCGCCG CCCACCACGC CTTCCTGCAG 
GACCTGTACC TGCGCGCGCG CTACCATGAG GCCGAGCGGG CCCGCGGCCG TGCGCTGGGC 
GCAGTGGACA AGTATCGACT CCGCAAGAAG TTCCCGCTGC CCAAGACCAT CTGGGACGGC 
GAGGAGACAG TCTACTGCTT CAAGGAGCGC TCCCGCGCAG CGCTCAAGGC CTGCTACCGC 
GGCAACCGCT ACCCCACGCC GGACGAGAAG CGCCGCCTGG CCACACTCAC CGGCCTGTCG 
CTCACGCAGG TCAGCAACTG GTTCAAGAAC CGGCGACAGC GCGACCGGAC CGGGGCCGGA 
GGCGGCGCGC CCTGCAAGAG CGAGTCTGAT GGGAATCCCA CGACTGAGGA CGAGTCCAGC 
CGAAGTCCTG AGGACCTGGA GAGAGGGGCG GCCCCAGTGT CCGCCGAGGC CGCTGCCCAG 
GGCTCCATGT TCCTGGCAGG GACCGGCCCT CCCGCGCCTT GCCCGGCTTC CTCCTCCATC 
CTGGTGAATG GGAGCTTCCT GGCAGCCAGC GGCTCCCCAG CAGTGCTCCT CAACGGGGGC 
CCCGTCATCA TCAACGGCCT GGCCCTGGGC GAGGCCTCCA GCCTGGGCCC GCTGCTGCTC 
ACTGGGGGCG GGGGTGCCCC TCCACCGCAG CCCAGCCCTC AGGGGGCCAG CGAGGCCAAG 
ACCTCTCTGG TCCTGGACCC TCAGACAGGG GAGGTGCGGC TGGAGGAGGC TCAGTCGGAG 
GCCCCTGAGA CCAAAGGGGC CCAGGTGGCT GCTCCGGGAC CAGCCCTTGG AGAGGAGGTC 
CTGGGGCCCC TGGCCCAAGT GGTGCCTGGC CCCCCGACGG CTGCCACCTT TCCTCTGCCC 
CCGGGGCCAG TGCCTGCTGT GGCTGCCCCA CAAGTGGTAC CGCTCTCCCC ACCCCCGGGG 
TATCCCACGG GCCTGAGCCC CACCTCCCCA CTATTGAACC TGCCCCAGGT AGTACCCACC 
TCACAGGTGG TGACCCTGCC CCAGGCTGTG GGGCCCCTGC AGCTGTTGGC AGCCGGGCCA 
GGCAGCCCTG TGAAGGTGGC AGCTGCAGCA GGCCCTGCCA ACGTGCACCT CATCAACTCC 
GGGGTGGGCG TGACTGCCCT GCAGCTGCCT TCGGCCACTG CCCCAGGAAA CTTCCTCCTG 
GCCAACCCTG TGTCTGGCAG CCCCATCGTG ACGGGTGTGG CCGTGCAGCA GGGCAAGATC 
ATCCTCACCG CCACCTTCCC CACCAGCATG CTCGTCTCCC AGGTCCTGCC GCCAGCCCCC 
GGCCTGGCCC TGCCACTGAA GCCAGAGACG GCCATCTCCG TGCCTGAGGG AGGCCTCCCG 
GTGGCCCCCA GCCCTGCTCT CCCAGAGGCT CACGCCCTAG GCACCCTTTC TGCGCAGCAG 
CCACCCCCCG CCGCTGCCAC CACCTCCAGC ACCAGCCTGC CCTTCTCCCC TGACTCCCCT 
GGCCTCCTGC CCAACTTCCC GGCGCCCCCA CCAGAGGGGC TGATGTTGTC ACCCGCGGCC 
GTGCCTGTCT GGTCAGCAGG GCTGGAACTA AGCGCAGGAA CAGAGGGGCT GCTGGAAGCG 
GAAAAGGGGC TGGGGACACA GGCCCCCCAC ACCGTGCTGA GGCTGCCAGA CCCCGACCCT 
GAGGGGCTGC TCCTGGGGGC CACCGCAGGG GGTGAGGTTG ACGAGGGGTT GGAAGCTGAG 
GCCAAGGTTC TGACCCAGCT CCAGTCGGTG CCTGTGGAGG AGCCCTTGGA ACTGTGA