Upf3a cDNA ORF clone, Mus pahari(shrew mouse)

Gene
Clones
gRNAs

Summary

Gene Symbol	Upf3a
Entrez Gene ID	110336733
Full Name	UPF3A, regulator of nonsense mediated mRNA decay
Gene Type	protein-coding
Organism	Mus pahari(shrew mouse)

mRNA and Protein(s)

mRNA	Protein	Name
XM_021219455.2	XP_021075114.2	regulator of nonsense transcripts 3A
XM_021219455.1	XP_021075114.1	regulator of nonsense transcripts 3A

Pathways from BioSystems
Gene Ontology

The following Upf3a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Upf3a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OMv58386	XM_021219455.1 Latest version!	Mus pahari UPF3A, regulator of nonsense mediated mRNA decay (Upf3a), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OMv81387	XM_021219455.2 Latest version!	Mus pahari UPF3A regulator of nonsense mediated mRNA decay (Upf3a), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Upf3a ( XM_021219455.1 ) cDNA ORF clone, Mus pahari(shrew mouse) -> XP_021075114.1 Mus pahari UPF3A, regulator of nonsense mediated mRNA decay (Upf3a), mRNA.

Price & Availability↑

CloneID	OMv58386
Clone ID Related Accession (Same CDS sequence)	XM_021219455.1
Accession Version	XM_021219455.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1269bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-05-18
Organism	Mus pahari(shrew mouse)
Product	regulator of nonsense transcripts 3A
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_034608.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus pahari Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCGCTCGG AAGAGGGGGC CGGAGGCTTG GGCGCAGCCC TGGCTGCGCG GGGCCCGAGC 
TGGAGGGAGA AACTATTGGG CTCAGAGGCC CACTGCCGCC GCGTGTCGCC GCGGAAGGAG 
TCGGTGGCGC CGCCGGCCCC GACCCTGAGT GAGAGCGGGT CCAGCAAACC TCGCGAGGAG 
AAGAGGACGG CCCTGAGCAA GGTGGTCCTC CGGCGTCTAC CCCCGGGCCT CACCAAAGAG 
CAGCTGGAAG AGCAACTGCG CCCCCTGCCC GCGCACGATT ACTTCGAGGT GGTGGCTGCC 
GACCTCAGCC TTTATCCTCA TGTCTACTCC AGAGCATACA TTAATTTTAG GAACCCTGAT 
GACATCCTGC TGTTCAGAGA CCGTTTTGAC GGCTATATCT TCATTGGCAA TAAAGGCCTG 
GAGTATCCTG CCGTGGTGGA GTTTGCTCCA TTCCAGAAGA TTGCCAAAAA GAAGCTGAAG 
AAAAAAGATG CCAAGACCGG AAGTATTGAA GATGACCCAG AATATAAACA GTTCCTGGAG 
TCGTACAGCC TGGAGGAGGA GAAGACCAGC GCTAGTCCCG AGACGCTGCT GGGAGAGATA 
GAAGCCAAGA CGAGAGAGCT CCTGGCCAGG AGAACCACCC CTCTTTTGGA ATATATTAAA 
AACAGAAAAT TAGAAAAGCA GAGACTCCGG GAAGAAAAGC GTGAGGAGCG GAGGAGGCGG 
GAGCTAGAGA AGAAGCGTCT GCGGGAAGAA GAGAAAAGGA AGAGGAGAGA AGAGGACCGG 
TGTAAGAGGA AGGAGGCGGA GAAGCAGAAG AGAGCGGAGA AGGACGTGAG GATCAAGCTT 
CTTAAAAAAC TGGAAACGGG AGAAGAAGTG ACCATAGAGA AACCCAAAGA AAGAGGTGAA 
ACTGTTGGTG CTGGAGACGA GAAACAGGAA GTCCGGCTGG TAGCGAGCCA GCCAGAGATG 
GCTGGGGAGA GACTACAGGA TGGCAGTGAT AAAGAGCCAA GGGACAAGAG ATTGCGAGAG 
AAAGACCCTG AAACTTCAAG ATGTCATCCA GACCCTTGCA GGAAGCACAG CATTCACTCA 
GAGTTTGCCA GGTTTTCCAG AAGGAACGAA GACGAGGCAA AGTGGGGGAA AGGCTTCTCC 
CAGGACAGAG GGAAGAAGGG CCAGGATGGC AGTGTCCCCG TGGACGTGGC AGACAGAGGC 
GGCAAGGAGC ACAAGGAGTA TGACAGCCTG GGGCCAAGAA AGGATCGTCT GGGAAACAAA 
GCCCAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_021075114.1
CDS	71..1339
Translation	MRSEEGAGGLGAALAARGPSWREKLLGSEAHCRRVSPRKESVAPPAPTLSESGSSKPREEKRTALSKVVLRRLPPGLTKEQLEEQLRPLPAHDYFEVVAADLSLYPHVYSRAYINFRNPDDILLFRDRFDGYIFIGNKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKQFLESYSLEEEKTSASPETLLGEIEAKTRELLARRTTPLLEYIKNRKLEKQRLREEKREERRRRELEKKRLREEEKRKRREEDRCKRKEAEKQKRAEKDVRIKLLKKLETGEEVTIEKPKERGETVGAGDEKQEVRLVASQPEMAGERLQDGSDKEPRDKRLREKDPETSRCHPDPCRKHSIHSEFARFSRRNEDEAKWGKGFSQDRGKKGQDGSVPVDVADRGGKEHKEYDSLGPRKDRLGNKAQ

Target ORF information:

RefSeq Version	XM_021219455.1
Organism	Mus pahari(shrew mouse)
Definition	Mus pahari UPF3A, regulator of nonsense mediated mRNA decay (Upf3a), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_021219455.1

ORF Insert Sequence:

ATGCGCTCGG AAGAGGGGGC CGGAGGCTTG GGCGCAGCCC TGGCTGCGCG GGGCCCGAGC 
TGGAGGGAGA AACTATTGGG CTCAGAGGCC CACTGCCGCC GCGTGTCGCC GCGGAAGGAG 
TCGGTGGCGC CGCCGGCCCC GACCCTGAGT GAGAGCGGGT CCAGCAAACC TCGCGAGGAG 
AAGAGGACGG CCCTGAGCAA GGTGGTCCTC CGGCGTCTAC CCCCGGGCCT CACCAAAGAG 
CAGCTGGAAG AGCAACTGCG CCCCCTGCCC GCGCACGATT ACTTCGAGGT GGTGGCTGCC 
GACCTCAGCC TTTATCCTCA TGTCTACTCC AGAGCATACA TTAATTTTAG GAACCCTGAT 
GACATCCTGC TGTTCAGAGA CCGTTTTGAC GGCTATATCT TCATTGGCAA TAAAGGCCTG 
GAGTATCCTG CCGTGGTGGA GTTTGCTCCA TTCCAGAAGA TTGCCAAAAA GAAGCTGAAG 
AAAAAAGATG CCAAGACCGG AAGTATTGAA GATGACCCAG AATATAAACA GTTCCTGGAG 
TCGTACAGCC TGGAGGAGGA GAAGACCAGC GCTAGTCCCG AGACGCTGCT GGGAGAGATA 
GAAGCCAAGA CGAGAGAGCT CCTGGCCAGG AGAACCACCC CTCTTTTGGA ATATATTAAA 
AACAGAAAAT TAGAAAAGCA GAGACTCCGG GAAGAAAAGC GTGAGGAGCG GAGGAGGCGG 
GAGCTAGAGA AGAAGCGTCT GCGGGAAGAA GAGAAAAGGA AGAGGAGAGA AGAGGACCGG 
TGTAAGAGGA AGGAGGCGGA GAAGCAGAAG AGAGCGGAGA AGGACGTGAG GATCAAGCTT 
CTTAAAAAAC TGGAAACGGG AGAAGAAGTG ACCATAGAGA AACCCAAAGA AAGAGGTGAA 
ACTGTTGGTG CTGGAGACGA GAAACAGGAA GTCCGGCTGG TAGCGAGCCA GCCAGAGATG 
GCTGGGGAGA GACTACAGGA TGGCAGTGAT AAAGAGCCAA GGGACAAGAG ATTGCGAGAG 
AAAGACCCTG AAACTTCAAG ATGTCATCCA GACCCTTGCA GGAAGCACAG CATTCACTCA 
GAGTTTGCCA GGTTTTCCAG AAGGAACGAA GACGAGGCAA AGTGGGGGAA AGGCTTCTCC 
CAGGACAGAG GGAAGAAGGG CCAGGATGGC AGTGTCCCCG TGGACGTGGC AGACAGAGGC 
GGCAAGGAGC ACAAGGAGTA TGACAGCCTG GGGCCAAGAA AGGATCGTCT GGGAAACAAA 
GCCCAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Upf3a ( XM_021219455.2 ) cDNA ORF clone, Mus pahari(shrew mouse) -> XP_021075114.2 Mus pahari UPF3A regulator of nonsense mediated mRNA decay (Upf3a), mRNA.

Price & Availability↑

CloneID	OMv81387
Clone ID Related Accession (Same CDS sequence)	XM_021219455.2
Accession Version	XM_021219455.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1350bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-06-17
Organism	Mus pahari(shrew mouse)
Product	regulator of nonsense transcripts 3A
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_034608.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Jun 18, 2019 this sequence version replaced XM_021219455.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus pahari Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCAAGGG AGGGGCTGCC TAGTCCTCGC GAGGCTTCGT TCTCGCGGAG GTGGCGGCGG 
GCCGGCGGGC GGCCGGTGGG GATGCGCTCG GAAGAGGGGG CCGGAGGCTT GGGCGCAGCC 
CTGGCTGCGC GGGGCCCGAG CTGGAGGGAG AAACTATTGG GCTCAGAGGC CCACTGCCGC 
CGCGTGTCGC CGCGGAAGGA GTCGGTGGCG CCGCCGGCCC CGACCCTGAG TGAGAGCGGG 
TCCAGCAAAC CTCGCGAGGA GAAGAGGACG GCCCTGAGCA AGGTGGTCCT CCGGCGTCTA 
CCCCCGGGCC TCACCAAAGA GCAGCTGGAA GAGCAACTGC GCCCCCTGCC CGCGCACGAT 
TACTTCGAGG TGGTGGCTGC CGACCTCAGC CTTTATCCTC ATGTCTACTC CAGAGCATAC 
ATTAATTTTA GGAACCCTGA TGACATCCTG CTGTTCAGAG ACCGTTTTGA CGGCTATATC 
TTCATTGGCA ATAAAGGCCT GGAGTATCCT GCCGTGGTGG AGTTTGCTCC ATTCCAGAAG 
ATTGCCAAAA AGAAGCTGAA GAAAAAAGAT GCCAAGACCG GAAGTATTGA AGATGACCCA 
GAATATAAAC AGTTCCTGGA GTCGTACAGC CTGGAGGAGG AGAAGACCAG CGCTAGTCCC 
GAGACGCTGC TGGGAGAGAT AGAAGCCAAG ACGAGAGAGC TCCTGGCCAG GAGAACCACC 
CCTCTTTTGG AATATATTAA AAACAGAAAA TTAGAAAAGC AGAGACTCCG GGAAGAAAAG 
CGTGAGGAGC GGAGGAGGCG GGAGCTAGAG AAGAAGCGTC TGCGGGAAGA AGAGAAAAGG 
AAGAGGAGAG AAGAGGACCG GTGTAAGAGG AAGGAGGCGG AGAAGCAGAA GAGAGCGGAG 
AAGGACGTGA GGATCAAGCT TCTTAAAAAA CTGGAAACGG GAGAAGAAGT GACCATAGAG 
AAACCCAAAG AAAGAGGTGA AACTGTTGGT GCTGGAGACG AGAAACAGGA AGTCCGGCTG 
GTAGCGAGCC AGCCAGAGAT GGCTGGGGAG AGACTACAGG ATGGCAGTGA TAAAGAGCCA 
AGGGACAAGA GATTGCGAGA GAAAGACCCT GAAACTTCAA GATGTCATCC AGACCCTTGC 
AGGAAGCACA GCATTCACTC AGAGTTTGCC AGGTTTTCCA GAAGGAACGA AGACGAGGCA 
AAGTGGGGGA AAGGCTTCTC CCAGGACAGA GGGAAGAAGG GCCAGGATGG CAGTGTCCCC 
GTGGACGTGG CAGACAGAGG CGGCAAGGAG CACAAGGAGT ATGACAGCCT GGGGCCAAGA 
AAGGATCGTC TGGGAAACAA AGCCCAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_021075114.2
CDS	6..1355
Translation	MPREGLPSPREASFSRRWRRAGGRPVGMRSEEGAGGLGAALAARGPSWREKLLGSEAHCRRVSPRKESVAPPAPTLSESGSSKPREEKRTALSKVVLRRLPPGLTKEQLEEQLRPLPAHDYFEVVAADLSLYPHVYSRAYINFRNPDDILLFRDRFDGYIFIGNKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKQFLESYSLEEEKTSASPETLLGEIEAKTRELLARRTTPLLEYIKNRKLEKQRLREEKREERRRRELEKKRLREEEKRKRREEDRCKRKEAEKQKRAEKDVRIKLLKKLETGEEVTIEKPKERGETVGAGDEKQEVRLVASQPEMAGERLQDGSDKEPRDKRLREKDPETSRCHPDPCRKHSIHSEFARFSRRNEDEAKWGKGFSQDRGKKGQDGSVPVDVADRGGKEHKEYDSLGPRKDRLGNKAQ

Target ORF information:

RefSeq Version	XM_021219455.2
Organism	Mus pahari(shrew mouse)
Definition	Mus pahari UPF3A regulator of nonsense mediated mRNA decay (Upf3a), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_021219455.2

ORF Insert Sequence:

ATGCCAAGGG AGGGGCTGCC TAGTCCTCGC GAGGCTTCGT TCTCGCGGAG GTGGCGGCGG 
GCCGGCGGGC GGCCGGTGGG GATGCGCTCG GAAGAGGGGG CCGGAGGCTT GGGCGCAGCC 
CTGGCTGCGC GGGGCCCGAG CTGGAGGGAG AAACTATTGG GCTCAGAGGC CCACTGCCGC 
CGCGTGTCGC CGCGGAAGGA GTCGGTGGCG CCGCCGGCCC CGACCCTGAG TGAGAGCGGG 
TCCAGCAAAC CTCGCGAGGA GAAGAGGACG GCCCTGAGCA AGGTGGTCCT CCGGCGTCTA 
CCCCCGGGCC TCACCAAAGA GCAGCTGGAA GAGCAACTGC GCCCCCTGCC CGCGCACGAT 
TACTTCGAGG TGGTGGCTGC CGACCTCAGC CTTTATCCTC ATGTCTACTC CAGAGCATAC 
ATTAATTTTA GGAACCCTGA TGACATCCTG CTGTTCAGAG ACCGTTTTGA CGGCTATATC 
TTCATTGGCA ATAAAGGCCT GGAGTATCCT GCCGTGGTGG AGTTTGCTCC ATTCCAGAAG 
ATTGCCAAAA AGAAGCTGAA GAAAAAAGAT GCCAAGACCG GAAGTATTGA AGATGACCCA 
GAATATAAAC AGTTCCTGGA GTCGTACAGC CTGGAGGAGG AGAAGACCAG CGCTAGTCCC 
GAGACGCTGC TGGGAGAGAT AGAAGCCAAG ACGAGAGAGC TCCTGGCCAG GAGAACCACC 
CCTCTTTTGG AATATATTAA AAACAGAAAA TTAGAAAAGC AGAGACTCCG GGAAGAAAAG 
CGTGAGGAGC GGAGGAGGCG GGAGCTAGAG AAGAAGCGTC TGCGGGAAGA AGAGAAAAGG 
AAGAGGAGAG AAGAGGACCG GTGTAAGAGG AAGGAGGCGG AGAAGCAGAA GAGAGCGGAG 
AAGGACGTGA GGATCAAGCT TCTTAAAAAA CTGGAAACGG GAGAAGAAGT GACCATAGAG 
AAACCCAAAG AAAGAGGTGA AACTGTTGGT GCTGGAGACG AGAAACAGGA AGTCCGGCTG 
GTAGCGAGCC AGCCAGAGAT GGCTGGGGAG AGACTACAGG ATGGCAGTGA TAAAGAGCCA 
AGGGACAAGA GATTGCGAGA GAAAGACCCT GAAACTTCAA GATGTCATCC AGACCCTTGC 
AGGAAGCACA GCATTCACTC AGAGTTTGCC AGGTTTTCCA GAAGGAACGA AGACGAGGCA 
AAGTGGGGGA AAGGCTTCTC CCAGGACAGA GGGAAGAAGG GCCAGGATGG CAGTGTCCCC 
GTGGACGTGG CAGACAGAGG CGGCAAGGAG CACAAGGAGT ATGACAGCCT GGGGCCAAGA 
AAGGATCGTC TGGGAAACAA AGCCCAGTAG