Ly6g5c cDNA ORF clone, Mus musculus(house mouse)

Gene
Clones
gRNAs

Summary

Gene Symbol	Ly6g5c
Entrez Gene ID	114652
Full Name	lymphocyte antigen 6 complex, locus G5C
Synonyms	G5c,NG33
General protein information	Preferred Names lymphocyte antigen 6 complex, locus G5C Names lymphocyte antigen 6 complex locus protein G5c
Gene Type	protein-coding
Organism	Mus musculus(house mouse)
Genome	Chromosome: 17 Map Location: 17\|17 B1

mRNA and Protein(s)

mRNA	Protein	Name
NM_148947.2	NP_683749.1	lymphocyte antigen 6 complex locus protein G5c precursor
NM_148947.1	NP_683749.1	lymphocyte antigen 6 complex locus protein G5c precursor

Pathways from BioSystems

Homologies

Homo sapiens (human)	LY6G5C	NP_079538.3
	LY6G5C	NP_001028062.1
Bos taurus (cattle)	LY6G5C	XP_003587751.1
Mus musculus (house mouse)	Ly6g5c	NP_683749.1
Pan troglodytes (chimpanzee)	LY6G5C	XP_001156775.2
Canis lupus familiaris (dog)	LY6G5C	NP_001003166.1
Rattus norvegicus (Norway rat)	Ly6g5c	NP_942034.3

Gene Ontology
Bibliography

Related articles in PubMed

Organization, evolution and functions of the human and mouse Ly6/uPAR family genes.
Loughner CL, Bruford EA, McAndrews MS, Delp EE, Swamynathan S, Swamynathan SK
Human genomics1010(2016 Apr)

Characterization of the five novel Ly-6 superfamily members encoded in the MHC, and detection of cells expressing their potential ligands.
Mallya M, Campbell RD, Aguado B
Protein science : a publication of the Protein Society15(10)2244-56(2006 Oct)

Transcriptional analysis of a novel cluster of LY-6 family members in the human and mouse major histocompatibility complex: five genes with many splice forms.
Mallya M, Campbell RD, Aguado B
Genomics80(1)113-23(2002 Jul)

The mouse as a model for the effects of MHC genes on human disease.
Allcock RJ, Martin AM, Price P
Immunology today21(7)328-32(2000 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Ly6g5c gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ly6g5c cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OMu02183	NM_148947.2 Latest version!	Mus musculus lymphocyte antigen 6 complex, locus G5C (Ly6g5c), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$69.30 $99.00
View Old Accession Versions >>
OMu02183	NM_148947.1	Mus musculus lymphocyte antigen 6 complex, locus G5C (Ly6g5c), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$69.30 $99.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Ly6g5c ( NM_148947.2 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_683749.1 Mus musculus lymphocyte antigen 6 complex, locus G5C (Ly6g5c), mRNA.

Price & Availability↑

CloneID	OMu02183
Clone ID Related Accession (Same CDS sequence)	NM_148947.2 , NM_148947.1
Accession Version	NM_148947.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 450bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-11-04
Organism	Mus musculus(house mouse)
Product	lymphocyte antigen 6 complex locus protein G5c precursor
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC087117.9. On Jun 24, 2019 this sequence version replaced NM_148947.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BC145968.1, AJ315552.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849376, SAMN00849380 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: full length.

ATGCTTTTTA TGGCAGGCCC TGCAGCCAGC TGGTCCCTGA GGCCCCTGGG ACTCCATGGC 
GTCCCCCAAG CCTTGTGTGC TGTCCTCTTA ACAGTGCTGG TCATGAAGAC CTTGGTTCTC 
GGTGATACCA AGCTCGAGGA CCTTCACCCT CAGTCCCTCC CACTAAACAA GTACCTGAAT 
TGCTACCGAT GTCTGCTGGA GACCGAAGAG CTGGGGTGCC TCCTGGGGTC TGACACCTGC 
CTGACACCTC TGGGCAGCAG CTGTGTCACC CTGCACATAA AGAACAGCAG CGGTTTTAAT 
GTCATGGTGA GCGACTGCTA CAGCAAGGAG CAGATGGTCC ATTGTTCATA TACCCGTGCT 
TCCCCGGTGT TTGGCTTTTG GATATTCTAT CAGTGTTGCT TCCTGGATTT CTGCAACAAT 
CCGGACAACA GAAAGAATAG CATGCACTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_683749.1
CDS	7..456
Translation	MLFMAGPAASWSLRPLGLHGVPQALCAVLLTVLVMKTLVLGDTKLEDLHPQSLPLNKYLNCYRCLLETEELGCLLGSDTCLTPLGSSCVTLHIKNSSGFNVMVSDCYSKEQMVHCSYTRASPVFGFWIFYQCCFLDFCNNPDNRKNSMH

Target ORF information:

RefSeq Version	NM_148947.2
Organism	Mus musculus(house mouse)
Definition	Mus musculus lymphocyte antigen 6 complex, locus G5C (Ly6g5c), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_148947.2

ORF Insert Sequence:

ATGCTTTTTA TGGCAGGCCC TGCAGCCAGC TGGTCCCTGA GGCCCCTGGG ACTCCATGGC 
GTCCCCCAAG CCTTGTGTGC TGTCCTCTTA ACAGTGCTGG TCATGAAGAC CTTGGTTCTC 
GGTGATACCA AGCTCGAGGA CCTTCACCCT CAGTCCCTCC CACTAAACAA GTACCTGAAT 
TGCTACCGAT GTCTGCTGGA GACCGAAGAG CTGGGGTGCC TCCTGGGGTC TGACACCTGC 
CTGACACCTC TGGGCAGCAG CTGTGTCACC CTGCACATAA AGAACAGCAG CGGTTTTAAT 
GTCATGGTGA GCGACTGCTA CAGCAAGGAG CAGATGGTCC ATTGTTCATA TACCCGTGCT 
TCCCCGGTGT TTGGCTTTTG GATATTCTAT CAGTGTTGCT TCCTGGATTT CTGCAACAAT 
CCGGACAACA GAAAGAATAG CATGCACTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ly6g5c ( NM_148947.1 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_683749.1 Mus musculus lymphocyte antigen 6 complex, locus G5C (Ly6g5c), mRNA.

Price & Availability↑

CloneID	OMu02183
Clone ID Related Accession (Same CDS sequence)	NM_148947.2 , NM_148947.1
Accession Version	NM_148947.1	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 450bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-02-15
Organism	Mus musculus(house mouse)
Product	lymphocyte antigen 6 complex locus protein G5c precursor
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AJ315552.1. ##Evidence-Data-START## Transcript exon combination :: AJ315552.1, BC145966.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849376, SAMN00849380 [ECO:0000348] ##Evidence-Data-END##

ATGCTTTTTA TGGCAGGCCC TGCAGCCAGC TGGTCCCTGA GGCCCCTGGG ACTCCATGGC 
GTCCCCCAAG CCTTGTGTGC TGTCCTCTTA ACAGTGCTGG TCATGAAGAC CTTGGTTCTC 
GGTGATACCA AGCTCGAGGA CCTTCACCCT CAGTCCCTCC CACTAAACAA GTACCTGAAT 
TGCTACCGAT GTCTGCTGGA GACCGAAGAG CTGGGGTGCC TCCTGGGGTC TGACACCTGC 
CTGACACCTC TGGGCAGCAG CTGTGTCACC CTGCACATAA AGAACAGCAG CGGTTTTAAT 
GTCATGGTGA GCGACTGCTA CAGCAAGGAG CAGATGGTCC ATTGTTCATA TACCCGTGCT 
TCCCCGGTGT TTGGCTTTTG GATATTCTAT CAGTGTTGCT TCCTGGATTT CTGCAACAAT 
CCGGACAACA GAAAGAATAG CATGCACTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_683749.1
CDS	1..450
Translation	MLFMAGPAASWSLRPLGLHGVPQALCAVLLTVLVMKTLVLGDTKLEDLHPQSLPLNKYLNCYRCLLETEELGCLLGSDTCLTPLGSSCVTLHIKNSSGFNVMVSDCYSKEQMVHCSYTRASPVFGFWIFYQCCFLDFCNNPDNRKNSMH

Target ORF information:

RefSeq Version	NM_148947.1
Organism	Mus musculus(house mouse)
Definition	Mus musculus lymphocyte antigen 6 complex, locus G5C (Ly6g5c), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_148947.1

ORF Insert Sequence:

ATGCTTTTTA TGGCAGGCCC TGCAGCCAGC TGGTCCCTGA GGCCCCTGGG ACTCCATGGC 
GTCCCCCAAG CCTTGTGTGC TGTCCTCTTA ACAGTGCTGG TCATGAAGAC CTTGGTTCTC 
GGTGATACCA AGCTCGAGGA CCTTCACCCT CAGTCCCTCC CACTAAACAA GTACCTGAAT 
TGCTACCGAT GTCTGCTGGA GACCGAAGAG CTGGGGTGCC TCCTGGGGTC TGACACCTGC 
CTGACACCTC TGGGCAGCAG CTGTGTCACC CTGCACATAA AGAACAGCAG CGGTTTTAAT 
GTCATGGTGA GCGACTGCTA CAGCAAGGAG CAGATGGTCC ATTGTTCATA TACCCGTGCT 
TCCCCGGTGT TTGGCTTTTG GATATTCTAT CAGTGTTGCT TCCTGGATTT CTGCAACAAT 
CCGGACAACA GAAAGAATAG CATGCACTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Organization, evolution and functions of the human and mouse Ly6/uPAR family genes.
Human genomics1010(2016 Apr)
Loughner CL,Bruford EA,McAndrews MS,Delp EE,Swamynathan S,Swamynathan SK

Characterization of the five novel Ly-6 superfamily members encoded in the MHC, and detection of cells expressing their potential ligands.
Protein science : a publication of the Protein Society15(10)2244-56(2006 Oct)
Mallya M,Campbell RD,Aguado B

Transcriptional analysis of a novel cluster of LY-6 family members in the human and mouse major histocompatibility complex: five genes with many splice forms.
Genomics80(1)113-23(2002 Jul)
Mallya M,Campbell RD,Aguado B

The mouse as a model for the effects of MHC genes on human disease.
Immunology today21(7)328-32(2000 Jul)
Allcock RJ,Martin AM,Price P