LOC103420377 cDNA ORF clone, Malus domestica(apple)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC103420377
Entrez Gene ID	103420377
Full Name	pentatricopeptide repeat-containing protein At3g18020-like
Gene Type	protein-coding
Organism	Malus domestica(apple)

mRNA and Protein(s)

mRNA	Protein	Name
XM_008358440.2	XP_008356662.2	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g18020-like

Pathways from BioSystems
Gene Ontology

The following LOC103420377 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC103420377 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OMa154218	XM_008358440.2 Latest version!	Malus x domestica pentatricopeptide repeat-containing protein At3g18020-like (LOC103420377), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$426.30 $609.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC103420377 ( XM_008358440.2 ) cDNA ORF clone, Malus domestica(apple) -> XP_008356662.2 Malus x domestica pentatricopeptide repeat-containing protein At3g18020-like (LOC103420377), mRNA.

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CloneID	OMa154218
Clone ID Related Accession (Same CDS sequence)	XM_008358440.2
Accession Version	XM_008358440.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2100bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-21
Organism	Malus domestica(apple)
Product	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g18020-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007545616.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_008358440.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Malus domestica Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel ##RefSeq-Attributes-END##

ATGATTGCAC AAGCATGCAA ACGCACCATG TTCCTCACAA GCATTCCATC GTCTAAAACC 
CTCATCACCC CAAAAACCCT AACCCTACCT CTCGCATTCC TCTCCACAAC CTCACCACCT 
TCCGATCAAC AACCACCGCA ACACCTCCAC CAAGACCAAG CAATCAGCAT AGAAGACAAC 
AGATCATACT TCACCAAAAA AATCCACACC CTCTGCGCCA CCCACCGCGA TGTCGACGAA 
GCCCTCCGCC TCCTCGACCG CCTCCGCCTT CAAGGCTACC GTCCCGACTC CCTCAACCTC 
AGCAGCATCG TCCACGCTCT CTGCGACTCC AACCGCTTCG ATGAAGCCCA CCACCGCTTT 
GGCCACTATG TAGCTTCCGA CTGCGCCCCC GACGAGCGCA CTTGCAATGT TATTGTTGCC 
CGGTTGCTGG ATTCAAAAAC CCCACATGCC ACATTGCGTG TTCTGCGCTG TTTGACAAAT 
TTTAAGCCCG ATTTCGTGGC GTCTTTGGTT AATTACAACC GTTTGATCGA CCAATTTTGC 
TCGATCTTAC GACCCAGTGA CGGTCATAGA GTGTTGTTTG ATATGATTAG TAGAGGGCAT 
TGTCCGAATG CTGTTTCTTA CACTACATTG ATMAATGGGT ATTGTTTGAT TGGTGCGTTG 
GGTGATGCCC AGAAGGTGTT CGATGAAATG AGTGAAAGGG GAGTGGCGCC AAATTCCCTG 
ACGCATAGCG TGATGATTCG TGGTGTTCTT CGGCAGAGGG ATKTTGGGCG TGCAAAAGAA 
TTGATGGGAA AGCTCTGGGA GATCATGAAA GGTGAAGAYG ATGAGACTGT AAAGAGTGCG 
GCTTTTGGGA ATCTCGTTGA TTCTATGTGT AGAGAAGGGT TTTTTAATGA AGTGTTTGAC 
ATTGCGGAAG ATATGCCACA GGGGAAGACT GTGACAGAGG ATTTTGCTTA TGGACAAATG 
ATAGATTCGC TTTGTAAAGC CAGAAGGCAT CATGGGGCAT CCAGGATTGT TTATATTATG 
AGGAGTCAAG GGTTTGTTCC AAAGCTAACG TCATATAATT CCATTTTACA TGGACTGAGC 
AAGGAGGGAG AGGGAGGTTG CATGAGGGCT TATCAGTTGC TGGAGGAAGG AGTGAACTTT 
GGTTACTTTC CGTCGGAGTA CACTTACAAG GTCCTATTGG AAGGTCTGTG CCTAGAATCG 
GACGTCAAGA AGGCAAGGGA GGTTCTTGAA TATATGCTAA AGAAGGAAGG AGTGGACAGA 
ACTAGGATTT ATAACATATA TTTGAGAGCG TTGTGTCTTG TGAATAACAT GACTGAGCTT 
TTGAATGGAC TTGTTTCGAT GCTCCAGAGC CAGTGTCAGC CTGATGTGAT CACCCTAAAC 
ACAGTTCTTA ATGGGTTCTG CAAGATGGAA AGAATCGAGG AAGCGCTAAA GGTACTTGAT 
GACATGATGA GTGGCAAGTT TTGTGCACCA GACGTGGTGA CCTTCACAAC GATCATCAGT 
GGTTTAATAA ATGTGGGAAG AACTCAAGAA GCTCTTGTTA TGTTGCACCA TGTAATGCCC 
GAGAAAGGTT TCAGAGCTAA TGTTGTGACG TACAATGCTG TACTTCGTGG TTTATTCAAG 
CATAGGCAAG CAAGAGAAGC AATGGATTTG TTCAATGGCA TGGCAAACGA TGGCGTGGCT 
GCTGACAGTA CTACTTATAC TATAATAATT GACGGGTTAT GCGAATCAGA TCAAATAGAA 
GAAGCTAAGA AGTTTTGGGA TGAGGTTATT TGGCCATCAA AGATCCACGA TAATTTTGTG 
TATGCTGCCC TTATCAARGG GATTTGTCGT TCTGGGAGGT TTGAAGAAGC GTGCCATTTC 
CTTTATGAAC TAGTAGATGC TGGGGTCTCT CCGAATATAT ACAGTTATAA CATTGTGATY 
GACGCTGCTT GCAAATCMGG ATTGAGGAAG GAAGCGTATG AAGTTGTAAG AGAGATGAAA 
AGAAACGGAC TGGCTCCAGA TTCTGTAACA TGGAGGATTC TTGACAAGTT GCAGGGTGGC 
AGAAAACAAT CTTGTGATGA GGTTTCGAAT TTTCAATCAA TAAATGGGCC ACAGGGGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008356662.2
CDS	120..2219
Translation	MIAQACKRTMFLTSIPSSKTLITPKTLTLPLAFLSTTSPPSDQQPPQHLHQDQAISIEDNRSYFTKKIHTLCATHRDVDEALRLLDRLRLQGYRPDSLNLSSIVHALCDSNRFDEAHHRFGHYVASDCAPDERTCNVIVARLLDSKTPHATLRVLRCLTNFKPDFVASLVNYNRLIDQFCSILRPSDGHRVLFDMISRGHCPNAVSYTTLnullNGYCLIGALGDAQKVFDEMSERGVAPNSLTHSVMIRGVLRQRDnullGRAKELMGKLWEIMKGEnullDETVKSAAFGNLVDSMCREGFFNEVFDIAEDMPQGKTVTEDFAYGQMIDSLCKARRHHGASRIVYIMRSQGFVPKLTSYNSILHGLSKEGEGGCMRAYQLLEEGVNFGYFPSEYTYKVLLEGLCLESDVKKAREVLEYMLKKEGVDRTRIYNIYLRALCLVNNMTELLNGLVSMLQSQCQPDVITLNTVLNGFCKMERIEEALKVLDDMMSGKFCAPDVVTFTTIISGLINVGRTQEALVMLHHVMPEKGFRANVVTYNAVLRGLFKHRQAREAMDLFNGMANDGVAADSTTYTIIIDGLCESDQIEEAKKFWDEVIWPSKIHDNFVYAALInullGICRSGRFEEACHFLYELVDAGVSPNIYSYNIVnullDAACKnullGLRKEAYEVVREMKRNGLAPDSVTWRILDKLQGGRKQSCDEVSNFQSINGPQG

Target ORF information:

RefSeq Version	XM_008358440.2
Organism	Malus domestica(apple)
Definition	Malus x domestica pentatricopeptide repeat-containing protein At3g18020-like (LOC103420377), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008358440.2

ORF Insert Sequence:

ATGATTGCAC AAGCATGCAA ACGCACCATG TTCCTCACAA GCATTCCATC GTCTAAAACC 
CTCATCACCC CAAAAACCCT AACCCTACCT CTCGCATTCC TCTCCACAAC CTCACCACCT 
TCCGATCAAC AACCACCGCA ACACCTCCAC CAAGACCAAG CAATCAGCAT AGAAGACAAC 
AGATCATACT TCACCAAAAA AATCCACACC CTCTGCGCCA CCCACCGCGA TGTCGACGAA 
GCCCTCCGCC TCCTCGACCG CCTCCGCCTT CAAGGCTACC GTCCCGACTC CCTCAACCTC 
AGCAGCATCG TCCACGCTCT CTGCGACTCC AACCGCTTCG ATGAAGCCCA CCACCGCTTT 
GGCCACTATG TAGCTTCCGA CTGCGCCCCC GACGAGCGCA CTTGCAATGT TATTGTTGCC 
CGGTTGCTGG ATTCAAAAAC CCCACATGCC ACATTGCGTG TTCTGCGCTG TTTGACAAAT 
TTTAAGCCCG ATTTCGTGGC GTCTTTGGTT AATTACAACC GTTTGATCGA CCAATTTTGC 
TCGATCTTAC GACCCAGTGA CGGTCATAGA GTGTTGTTTG ATATGATTAG TAGAGGGCAT 
TGTCCGAATG CTGTTTCTTA CACTACATTG ATMAATGGGT ATTGTTTGAT TGGTGCGTTG 
GGTGATGCCC AGAAGGTGTT CGATGAAATG AGTGAAAGGG GAGTGGCGCC AAATTCCCTG 
ACGCATAGCG TGATGATTCG TGGTGTTCTT CGGCAGAGGG ATKTTGGGCG TGCAAAAGAA 
TTGATGGGAA AGCTCTGGGA GATCATGAAA GGTGAAGAYG ATGAGACTGT AAAGAGTGCG 
GCTTTTGGGA ATCTCGTTGA TTCTATGTGT AGAGAAGGGT TTTTTAATGA AGTGTTTGAC 
ATTGCGGAAG ATATGCCACA GGGGAAGACT GTGACAGAGG ATTTTGCTTA TGGACAAATG 
ATAGATTCGC TTTGTAAAGC CAGAAGGCAT CATGGGGCAT CCAGGATTGT TTATATTATG 
AGGAGTCAAG GGTTTGTTCC AAAGCTAACG TCATATAATT CCATTTTACA TGGACTGAGC 
AAGGAGGGAG AGGGAGGTTG CATGAGGGCT TATCAGTTGC TGGAGGAAGG AGTGAACTTT 
GGTTACTTTC CGTCGGAGTA CACTTACAAG GTCCTATTGG AAGGTCTGTG CCTAGAATCG 
GACGTCAAGA AGGCAAGGGA GGTTCTTGAA TATATGCTAA AGAAGGAAGG AGTGGACAGA 
ACTAGGATTT ATAACATATA TTTGAGAGCG TTGTGTCTTG TGAATAACAT GACTGAGCTT 
TTGAATGGAC TTGTTTCGAT GCTCCAGAGC CAGTGTCAGC CTGATGTGAT CACCCTAAAC 
ACAGTTCTTA ATGGGTTCTG CAAGATGGAA AGAATCGAGG AAGCGCTAAA GGTACTTGAT 
GACATGATGA GTGGCAAGTT TTGTGCACCA GACGTGGTGA CCTTCACAAC GATCATCAGT 
GGTTTAATAA ATGTGGGAAG AACTCAAGAA GCTCTTGTTA TGTTGCACCA TGTAATGCCC 
GAGAAAGGTT TCAGAGCTAA TGTTGTGACG TACAATGCTG TACTTCGTGG TTTATTCAAG 
CATAGGCAAG CAAGAGAAGC AATGGATTTG TTCAATGGCA TGGCAAACGA TGGCGTGGCT 
GCTGACAGTA CTACTTATAC TATAATAATT GACGGGTTAT GCGAATCAGA TCAAATAGAA 
GAAGCTAAGA AGTTTTGGGA TGAGGTTATT TGGCCATCAA AGATCCACGA TAATTTTGTG 
TATGCTGCCC TTATCAARGG GATTTGTCGT TCTGGGAGGT TTGAAGAAGC GTGCCATTTC 
CTTTATGAAC TAGTAGATGC TGGGGTCTCT CCGAATATAT ACAGTTATAA CATTGTGATY 
GACGCTGCTT GCAAATCMGG ATTGAGGAAG GAAGCGTATG AAGTTGTAAG AGAGATGAAA 
AGAAACGGAC TGGCTCCAGA TTCTGTAACA TGGAGGATTC TTGACAAGTT GCAGGGTGGC 
AGAAAACAAT CTTGTGATGA GGTTTCGAAT TTTCAATCAA TAAATGGGCC ACAGGGGTAG