LOC108276611 cDNA ORF clone, Ictalurus punctatus(channel catfish)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC108276611
Entrez Gene ID	108276611
Full Name	soluble scavenger receptor cysteine-rich domain-containing protein SSC5D-like
Gene Type	protein-coding
Organism	Ictalurus punctatus(channel catfish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_017488413.1	XP_017343902.1	soluble scavenger receptor cysteine-rich domain-containing protein SSC5D-like

Pathways from BioSystems
Gene Ontology

The following LOC108276611 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC108276611 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OIc10965	XM_017488413.1 Latest version!	Ictalurus punctatus soluble scavenger receptor cysteine-rich domain-containing protein SSC5D-like (LOC108276611), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$510.30 $729.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC108276611 ( XM_017488413.1 ) cDNA ORF clone, Ictalurus punctatus(channel catfish) -> XP_017343902.1 Ictalurus punctatus soluble scavenger receptor cysteine-rich domain-containing protein SSC5D-like (LOC108276611), transcript variant X1, mRNA.

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CloneID	OIc10965
Clone ID Related Accession (Same CDS sequence)	XM_017488413.1
Accession Version	XM_017488413.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2895bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-05
Organism	Ictalurus punctatus(channel catfish)
Product	soluble scavenger receptor cysteine-rich domain-containing protein SSC5D-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030431.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ictalurus punctatus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGGAAGAC GGGCCGCTGA TCTGGCCACT CCGGTGCCAG TGTCTGAAGT GCCAGCTTTG 
GTAGGAGTTC GCGATTGGAG GACAGCCAAC GGAGAGGCAG GGCTTACCTG TGCTCACCAG 
TGTAACGTTG GGGTACAAAC ATCGCCAGCC ATACGGAGCT GCCAAGAGAG CCGTGCTGTC 
AGGAAAACCA TGCCACCCAA CGGGCACATC TCTGTCAAAC TGGATGGCAG AAAAGGACAA 
AAAAGGAGTG CTTTATTTAA ACACCGGAGC CTTGAGAATA AGGTAAAGAA AGGTGTGACA 
TTCCAAGGTG TGGACGATGA TGATGATGAC GACGATGATG ATGCATGTAA AGGCAATAAA 
GCTGAAACGC ACTGTGACAT TCAGACAATT CAAACCAACA CACATCGGGC CAATGGGCGT 
ATTAAAGGAA AAAAGGAATT CCGCTTCACC AATGGCAGCG TGGTCGACTC AGAGGTGATG 
GATGGGATCA GCAATGACAT CTGTGAAGGG GAGTCGTCGA CTCTTCAGCT CAAAACTACA 
GTACACTCTG GGAAGAGGAA GGTTCCTCCA TGTTCACCTC CTCACAGATT CCCATTGAGG 
ATTTGCAGCA AATGTGGAGG AAGGCAGAAT CCAGTGGCTG CGGCTCTCTT CACCACCACC 
AGGGACAGCA CTTCGCCCTG TTCTGCTGGC TCAGAGAGTC TCAGATCTAG CCCTGCAGCT 
CCTCCAGTCT CAGGAAAAGA AACAGGATCC TCACTTTCTC CTCCAAACAC CGAGACTGAG 
AAATACAGAG TTATGCAAAT GAACAGAGGC CCTGCGGTGA CGTGGCCTCC TCCTAACCCA 
AATAGCAACC GGCTATTAGC ATCCACGCAG GAGGGAGAAG TGTTAAAACT CTCTGAACAT 
CAATCAAGCT GGAGATATGC TGGCCTTGGC CTTCCACACA TACACAGGGA CACTCCAGTT 
AGTCACACGC CATCTGCATA TACACACACA GTGGCAGGGA GTGCAATTCA GGAGACAGGC 
ATGCGTTCAC ACCCAGACCT CTGCTCCCAT AAACCAGCAC CACTGTCACA CACACTCACG 
CTCCAGGAAT CAAGACCCAC CATGCTCACT CCACACTCCC AACAATATTC CAGCCTTAAG 
ACAGACTCCC AATCCATCGC CCTGAAAGAC ACAGACTCCA TACCAAAGAT AAAATCACAC 
ACAAACAGCA ATATCCTGAC ACACACCTCA CATGTTGCTC TGACAAACCA TGCTAACATC 
CATCCAAGGT CTTCAGCATC TGTCCATTCA CCTATAATCA CTAAAGAGCA AAGCTTAGGA 
CAGAGCGCCA AACCTTTCAA CACTCCATAC CCTAGCAGAG ACACAAGAGT TGAAAATGGA 
TTAGAGAATG TCCAAAACGC AAACTCAAGG CCTTCAAGCT GCTTGCATGC AAATCCAAGC 
ATTAAACCTC AAAGCGCATC GCAAATTCAT TCCTACATGC ATCCTAAACC CACATCCGCC 
ACAGACTGCA CCAAACACCA ACCTACACAA ACACACTCTC TGACCACTGA CACATCCTCA 
GCCATTTCGC TTTGCACAGC CTTGTACTCC AAACCTTCCA TAGCACTTCA CTGCTCTCTT 
CCACATACGG ATGCCAAACC ACATCGAATA TTAAAGAACC AACAATCTAA CCCTTCACAC 
ACCTCAAACA TGAATGTTCA TAACAGCACC TCACTTAACC CAGGTCCTGT CACAACCCTG 
AGTCTTTTAA CCCAGTCCAA CACCGTTACA ATCACTCAAG CATTTATGGA AATGCATACG 
TACGGTATGG ACACCCCTAA TACAGACACA CAGAGTCGGT CTCTTGCACA ATCAGACCGT 
GCTAAGTCTG CACCTGAGAA ACTGGAGGAC AAAGTTTGCA AATCATCAGC AACAACTTTG 
GGCTCTGCTA AATCTCCTTG TAAGGAAGCA ACCAAGACTG TGACAGCTAC AAAAATAGGT 
TGCAAATTCG CAGCAGAGAC AGACAGTGAG AGCCGCGTGC AAGCTAACTG TGAACTCCTT 
GCAACTTCAA AATCACAAAC AATACACCAG CAATCCACAC CTCAGCATCC TGCCTGTCCT 
GCAGCCCCCA TAAAACCTCA TGAACCCAAT GCCTTGGGTT CACTCTCATG CCAACCTCCA 
AGACCTTTTC ACACACATCC ACTGCATCCA GCAATTAAAT TATTAATCGA GGTCACTGGA 
AACAAAAGGA CAGATATAGA CTCAAAGGCA AACCCATTTC TACTTTCTTC TTCAATGCCT 
TCAGACCAGA TCCAGAACAC GCAACTACAC CAAGAATTAG AGACTGCATC ACAGACGAGC 
ATTGTTTTAC CTGTTAGTGG GCCTGTCTCA AATGGCGGCT ATGCCCTCAC ACACTACCAC 
CCTCCCTCTT TGGTTCTGCT GTCACGCAGT TCCCCCGAGA GCAACAGGAG TCAGGACCTT 
CAGAAGAGGC TGCAGAGAGT AGAAACCAAT CTGCAGGCCA ACCAGGAGCG AGTCACGACC 
CTACTCAACA TCATCCAAGA CCTGGAGATG AGCCACGCAC TCAGCAAAGG ACGCCGATGT 
TTCAGAACCG GCCAGGATTT AAGCGATTGC TCCACCTGCC AGGAGACGGC ATGCATCATT 
TACAGTGTGG AGTATGACTT CCGGCAGCAG GAGCGACGAT TCAGGGACGT CTTAGAGCCT 
CTGGATTCCC CAGTGAGAAA GATCTGGGAG GGGGTTAACA TGGACTTGCT CTCCTTTTTC 
ACATTACTAA AACAGAACAA TGCACCATCT CAGACCAGCA GTCACATGGA GCCAGGAAGC 
AAGAGTAAAG TCAAGAAAAA GAAACTCTGC AGGAAGATTT TCAGCTGGTT ACCTCGAAAG 
GTCCAAAGGA AGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017343902.1
CDS	551..3445
Translation	MGRRAADLATPVPVSEVPALVGVRDWRTANGEAGLTCAHQCNVGVQTSPAIRSCQESRAVRKTMPPNGHISVKLDGRKGQKRSALFKHRSLENKVKKGVTFQGVDDDDDDDDDDACKGNKAETHCDIQTIQTNTHRANGRIKGKKEFRFTNGSVVDSEVMDGISNDICEGESSTLQLKTTVHSGKRKVPPCSPPHRFPLRICSKCGGRQNPVAAALFTTTRDSTSPCSAGSESLRSSPAAPPVSGKETGSSLSPPNTETEKYRVMQMNRGPAVTWPPPNPNSNRLLASTQEGEVLKLSEHQSSWRYAGLGLPHIHRDTPVSHTPSAYTHTVAGSAIQETGMRSHPDLCSHKPAPLSHTLTLQESRPTMLTPHSQQYSSLKTDSQSIALKDTDSIPKIKSHTNSNILTHTSHVALTNHANIHPRSSASVHSPIITKEQSLGQSAKPFNTPYPSRDTRVENGLENVQNANSRPSSCLHANPSIKPQSASQIHSYMHPKPTSATDCTKHQPTQTHSLTTDTSSAISLCTALYSKPSIALHCSLPHTDAKPHRILKNQQSNPSHTSNMNVHNSTSLNPGPVTTLSLLTQSNTVTITQAFMEMHTYGMDTPNTDTQSRSLAQSDRAKSAPEKLEDKVCKSSATTLGSAKSPCKEATKTVTATKIGCKFAAETDSESRVQANCELLATSKSQTIHQQSTPQHPACPAAPIKPHEPNALGSLSCQPPRPFHTHPLHPAIKLLIEVTGNKRTDIDSKANPFLLSSSMPSDQIQNTQLHQELETASQTSIVLPVSGPVSNGGYALTHYHPPSLVLLSRSSPESNRSQDLQKRLQRVETNLQANQERVTTLLNIIQDLEMSHALSKGRRCFRTGQDLSDCSTCQETACIIYSVEYDFRQQERRFRDVLEPLDSPVRKIWEGVNMDLLSFFTLLKQNNAPSQTSSHMEPGSKSKVKKKKLCRKIFSWLPRKVQRK

Target ORF information:

RefSeq Version	XM_017488413.1
Organism	Ictalurus punctatus(channel catfish)
Definition	Ictalurus punctatus soluble scavenger receptor cysteine-rich domain-containing protein SSC5D-like (LOC108276611), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017488413.1

ORF Insert Sequence:

ATGGGAAGAC GGGCCGCTGA TCTGGCCACT CCGGTGCCAG TGTCTGAAGT GCCAGCTTTG 
GTAGGAGTTC GCGATTGGAG GACAGCCAAC GGAGAGGCAG GGCTTACCTG TGCTCACCAG 
TGTAACGTTG GGGTACAAAC ATCGCCAGCC ATACGGAGCT GCCAAGAGAG CCGTGCTGTC 
AGGAAAACCA TGCCACCCAA CGGGCACATC TCTGTCAAAC TGGATGGCAG AAAAGGACAA 
AAAAGGAGTG CTTTATTTAA ACACCGGAGC CTTGAGAATA AGGTAAAGAA AGGTGTGACA 
TTCCAAGGTG TGGACGATGA TGATGATGAC GACGATGATG ATGCATGTAA AGGCAATAAA 
GCTGAAACGC ACTGTGACAT TCAGACAATT CAAACCAACA CACATCGGGC CAATGGGCGT 
ATTAAAGGAA AAAAGGAATT CCGCTTCACC AATGGCAGCG TGGTCGACTC AGAGGTGATG 
GATGGGATCA GCAATGACAT CTGTGAAGGG GAGTCGTCGA CTCTTCAGCT CAAAACTACA 
GTACACTCTG GGAAGAGGAA GGTTCCTCCA TGTTCACCTC CTCACAGATT CCCATTGAGG 
ATTTGCAGCA AATGTGGAGG AAGGCAGAAT CCAGTGGCTG CGGCTCTCTT CACCACCACC 
AGGGACAGCA CTTCGCCCTG TTCTGCTGGC TCAGAGAGTC TCAGATCTAG CCCTGCAGCT 
CCTCCAGTCT CAGGAAAAGA AACAGGATCC TCACTTTCTC CTCCAAACAC CGAGACTGAG 
AAATACAGAG TTATGCAAAT GAACAGAGGC CCTGCGGTGA CGTGGCCTCC TCCTAACCCA 
AATAGCAACC GGCTATTAGC ATCCACGCAG GAGGGAGAAG TGTTAAAACT CTCTGAACAT 
CAATCAAGCT GGAGATATGC TGGCCTTGGC CTTCCACACA TACACAGGGA CACTCCAGTT 
AGTCACACGC CATCTGCATA TACACACACA GTGGCAGGGA GTGCAATTCA GGAGACAGGC 
ATGCGTTCAC ACCCAGACCT CTGCTCCCAT AAACCAGCAC CACTGTCACA CACACTCACG 
CTCCAGGAAT CAAGACCCAC CATGCTCACT CCACACTCCC AACAATATTC CAGCCTTAAG 
ACAGACTCCC AATCCATCGC CCTGAAAGAC ACAGACTCCA TACCAAAGAT AAAATCACAC 
ACAAACAGCA ATATCCTGAC ACACACCTCA CATGTTGCTC TGACAAACCA TGCTAACATC 
CATCCAAGGT CTTCAGCATC TGTCCATTCA CCTATAATCA CTAAAGAGCA AAGCTTAGGA 
CAGAGCGCCA AACCTTTCAA CACTCCATAC CCTAGCAGAG ACACAAGAGT TGAAAATGGA 
TTAGAGAATG TCCAAAACGC AAACTCAAGG CCTTCAAGCT GCTTGCATGC AAATCCAAGC 
ATTAAACCTC AAAGCGCATC GCAAATTCAT TCCTACATGC ATCCTAAACC CACATCCGCC 
ACAGACTGCA CCAAACACCA ACCTACACAA ACACACTCTC TGACCACTGA CACATCCTCA 
GCCATTTCGC TTTGCACAGC CTTGTACTCC AAACCTTCCA TAGCACTTCA CTGCTCTCTT 
CCACATACGG ATGCCAAACC ACATCGAATA TTAAAGAACC AACAATCTAA CCCTTCACAC 
ACCTCAAACA TGAATGTTCA TAACAGCACC TCACTTAACC CAGGTCCTGT CACAACCCTG 
AGTCTTTTAA CCCAGTCCAA CACCGTTACA ATCACTCAAG CATTTATGGA AATGCATACG 
TACGGTATGG ACACCCCTAA TACAGACACA CAGAGTCGGT CTCTTGCACA ATCAGACCGT 
GCTAAGTCTG CACCTGAGAA ACTGGAGGAC AAAGTTTGCA AATCATCAGC AACAACTTTG 
GGCTCTGCTA AATCTCCTTG TAAGGAAGCA ACCAAGACTG TGACAGCTAC AAAAATAGGT 
TGCAAATTCG CAGCAGAGAC AGACAGTGAG AGCCGCGTGC AAGCTAACTG TGAACTCCTT 
GCAACTTCAA AATCACAAAC AATACACCAG CAATCCACAC CTCAGCATCC TGCCTGTCCT 
GCAGCCCCCA TAAAACCTCA TGAACCCAAT GCCTTGGGTT CACTCTCATG CCAACCTCCA 
AGACCTTTTC ACACACATCC ACTGCATCCA GCAATTAAAT TATTAATCGA GGTCACTGGA 
AACAAAAGGA CAGATATAGA CTCAAAGGCA AACCCATTTC TACTTTCTTC TTCAATGCCT 
TCAGACCAGA TCCAGAACAC GCAACTACAC CAAGAATTAG AGACTGCATC ACAGACGAGC 
ATTGTTTTAC CTGTTAGTGG GCCTGTCTCA AATGGCGGCT ATGCCCTCAC ACACTACCAC 
CCTCCCTCTT TGGTTCTGCT GTCACGCAGT TCCCCCGAGA GCAACAGGAG TCAGGACCTT 
CAGAAGAGGC TGCAGAGAGT AGAAACCAAT CTGCAGGCCA ACCAGGAGCG AGTCACGACC 
CTACTCAACA TCATCCAAGA CCTGGAGATG AGCCACGCAC TCAGCAAAGG ACGCCGATGT 
TTCAGAACCG GCCAGGATTT AAGCGATTGC TCCACCTGCC AGGAGACGGC ATGCATCATT 
TACAGTGTGG AGTATGACTT CCGGCAGCAG GAGCGACGAT TCAGGGACGT CTTAGAGCCT 
CTGGATTCCC CAGTGAGAAA GATCTGGGAG GGGGTTAACA TGGACTTGCT CTCCTTTTTC 
ACATTACTAA AACAGAACAA TGCACCATCT CAGACCAGCA GTCACATGGA GCCAGGAAGC 
AAGAGTAAAG TCAAGAAAAA GAAACTCTGC AGGAAGATTT TCAGCTGGTT ACCTCGAAAG 
GTCCAAAGGA AGTAG